BLASTX nr result
ID: Glycyrrhiza24_contig00013830
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00013830
(1861 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chlorop... 768 0.0
ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2... 709 0.0
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop... 695 0.0
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa... 684 0.0
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo] 675 0.0
>ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine max]
Length = 593
Score = 768 bits (1984), Expect = 0.0
Identities = 391/516 (75%), Positives = 428/516 (82%), Gaps = 5/516 (0%)
Frame = -3
Query: 1850 MVIVALSPSLPGRRNLFSSLPSTPPPHDPTTNSSATXXXXXXXXXXXXXXXXXXXXXXXX 1671
MVIVALS SLP RNLFSS+P TPPP PTT S+
Sbjct: 1 MVIVALSSSLPAGRNLFSSIPPTPPP--PTTVSATPQPPIPIPKYPPPRKKPQPPPPQNP 58
Query: 1670 XXPGLKYHRNSRYYKPV-KHGGTITSDG-DRSVIIGESGVSYLLPGAPFEFQYSYSETPK 1497
LK+HR S+Y++PV + GG I SDG DR+V+IGESGVSYLLPGAPFEFQ+SYSETPK
Sbjct: 59 ---ALKHHRRSKYHRPVPRDGGIIASDGADRAVVIGESGVSYLLPGAPFEFQFSYSETPK 115
Query: 1496 AKPLAIREPAFLPFAPPSMPRPWTGKAPLXXXXXK-IPVFDSFNPPPPGTKGVKHVEMPG 1320
AKP+AIREPAFLPFAPP+MPRPWTGKAPL K +P+FDSFNPPP GTKGVK VEMPG
Sbjct: 116 AKPIAIREPAFLPFAPPTMPRPWTGKAPLKGKKSKKVPLFDSFNPPPAGTKGVKLVEMPG 175
Query: 1319 PFPMGKFPEEGKSREEILGEPLKKWEIRMLVKAMVKDNRQVNLGSDGLTHNMLELIHSHW 1140
PFPMG+FP EGKSREEILGEPLKKWEI MLVK M+ NRQVNLG DGLTHNMLELIHSHW
Sbjct: 176 PFPMGQFPLEGKSREEILGEPLKKWEIHMLVKPMMSYNRQVNLGRDGLTHNMLELIHSHW 235
Query: 1139 XXXXXXXXXXKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVM 960
GVPTVDMDNVC HIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVM
Sbjct: 236 KRRRVCKIRCLGVPTVDMDNVCHHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVM 295
Query: 959 LWKPAAPVYPKLIQDAPGGLTKAEADELRTKGKNLLPICKLAKNGVYTTLVKDVRDAFEG 780
LWKPAAPVYPKLIQDAPGGLTK EADELR KGK+LLPICKLAKNGVYT+LVKDVRDAFEG
Sbjct: 296 LWKPAAPVYPKLIQDAPGGLTKDEADELRMKGKSLLPICKLAKNGVYTSLVKDVRDAFEG 355
Query: 779 SPLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSKYP-PAPVFTP 603
S LVKI+CKGLDPSDYKK+GAKLKDLVPCVLLSFDDEQILMWRGKDWKS+YP P PVFTP
Sbjct: 356 SILVKINCKGLDPSDYKKIGAKLKDLVPCVLLSFDDEQILMWRGKDWKSRYPQPLPVFTP 415
Query: 602 AKVGITRSLDNTGEGDDNQSKHNSSMVNTSPKMLSLWKSAIESNKALLLEKFDLGPDALL 423
+K I +L+N+GE DDNQ KH+ +MVNTSPKMLSLWK AI+S+KALLL++F+LGPDALL
Sbjct: 416 SKANIVGNLENSGETDDNQYKHDGNMVNTSPKMLSLWKRAIQSSKALLLDEFNLGPDALL 475
Query: 422 EKVEEFEGISQAMEHSHPAFPLLS-EDGAEGAIANF 318
EKVEEF+ +SQA+EHSHPAF L S E+ AEG+ ANF
Sbjct: 476 EKVEEFDTVSQALEHSHPAFSLSSKENDAEGSSANF 511
>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
predicted protein [Populus trichocarpa]
Length = 506
Score = 709 bits (1830), Expect = 0.0
Identities = 348/500 (69%), Positives = 397/500 (79%), Gaps = 3/500 (0%)
Frame = -3
Query: 1649 HRNSRYYKPVKHGG-TITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKAKPLAIRE 1473
H ++YYKPVK GG I SDGDRSV++G+SGVSYLLPGAPFEFQ+SYSETPK KPLAIRE
Sbjct: 10 HLRTKYYKPVKDGGGVIASDGDRSVLVGDSGVSYLLPGAPFEFQFSYSETPKVKPLAIRE 69
Query: 1472 PAFLPFAPPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPFPMGKFPE 1293
PAFLPFAPP+MPRPWTGK PL KIPVFDSFNPPP G KGVK+VEMPGP+P GKFPE
Sbjct: 70 PAFLPFAPPTMPRPWTGKPPLKTSKKKIPVFDSFNPPPAGKKGVKYVEMPGPYPFGKFPE 129
Query: 1292 EGKSREEILGEPLKKWEIRMLVKAMVKDNRQVNLGSDGLTHNMLELIHSHWXXXXXXXXX 1113
EGKSREEILGEPLK WEI++L+K + DNRQVNLG DGLTHNMLEL+HSHW
Sbjct: 130 EGKSREEILGEPLKTWEIKLLIKPHLSDNRQVNLGEDGLTHNMLELVHSHWKRRRVCKVR 189
Query: 1112 XKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVMLWKPAAPVY 933
KGVPTVDMDNVCRH+EEKTGGKIIHRVGGVVYLFRGRNYNY TRPQYPVMLWKPA PVY
Sbjct: 190 CKGVPTVDMDNVCRHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPATPVY 249
Query: 932 PKLIQDAPGGLTKAEADELRTKGKNLLPICKLAKNGVYTTLVKDVRDAFEGSPLVKIDCK 753
PKLIQ+AP GLTKA+ADE R KGKNLLPICKLAKNGVY TLV+DVR AFEGSPLVK+DCK
Sbjct: 250 PKLIQEAPEGLTKAQADEFRKKGKNLLPICKLAKNGVYITLVRDVRAAFEGSPLVKVDCK 309
Query: 752 GLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSKYPPA--PVFTPAKVGITRS 579
G++PSDYKKLGAKLKDLVPCVLLSFDDEQILMWRG+DWKS YP A + PA++ I
Sbjct: 310 GMEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGQDWKSMYPEARPSISFPAELDIASG 369
Query: 578 LDNTGEGDDNQSKHNSSMVNTSPKMLSLWKSAIESNKALLLEKFDLGPDALLEKVEEFEG 399
D++G+ DD+ ++ ++++SPKM+ LWK A+ESNKA+LL++ DLGPDALL KVEEFEG
Sbjct: 370 SDDSGKSDDDCDNSDAKILSSSPKMMLLWKHALESNKAILLDEIDLGPDALLTKVEEFEG 429
Query: 398 ISQAMEHSHPAFPLLSEDGAEGAIANFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDI 219
ISQA EHS+PA + SEDG+ +I+ F
Sbjct: 430 ISQATEHSYPALVMSSEDGSSNSISTFEDDSHSENFSEDDMYSDDEYYDSESFEE----- 484
Query: 218 VDTSAQPGSLPVDLIVEKLN 159
++TSA PGSL +DLI EKL+
Sbjct: 485 LETSAPPGSLSIDLIAEKLD 504
>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
gi|297739063|emb|CBI28552.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 695 bits (1794), Expect = 0.0
Identities = 354/513 (69%), Positives = 393/513 (76%), Gaps = 2/513 (0%)
Frame = -3
Query: 1850 MVIVALSPSLPGRRNLFSSLPSTPPPHDPTTNSSATXXXXXXXXXXXXXXXXXXXXXXXX 1671
MVI+A +LPG +LFSSLP PPP+D TT++
Sbjct: 1 MVILA---TLPGSSSLFSSLPQGPPPNDSTTSTPPQPPIPIPKYPPPLKSQKSSRPPTKP 57
Query: 1670 XXPGLK-YHRNSRYYKPVKHGGTITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKA 1494
P K H S+YYKPV G I SDGDRSV+IGESGVSYLLPGAPFEFQ+SYSETPKA
Sbjct: 58 PTPAFKTVHHRSKYYKPVSDG-VIASDGDRSVVIGESGVSYLLPGAPFEFQFSYSETPKA 116
Query: 1493 KPLAIREPAFLPFAPPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPF 1314
KPLAIREPAFLPFAPP+MPRPWTGKAPL KIP+FDSFNPPPPGTKGVK VEMPGPF
Sbjct: 117 KPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPF 176
Query: 1313 PMGKFPEEGKSREEILGEPLKKWEIRMLVKAMVKDNRQVNLGSDGLTHNMLELIHSHWXX 1134
P+GKFP EG++REEILGEPL K EIRMLVK + NRQVNLG DGLTHNMLELIHSHW
Sbjct: 177 PLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKR 236
Query: 1133 XXXXXXXXKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVMLW 954
KGVPT+DMDNVC H+EEKTGGKIIHRVGGVVYLFRGRNYNY TRPQYPVMLW
Sbjct: 237 QRVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLW 296
Query: 953 KPAAPVYPKLIQDAPGGLTKAEADELRTKGKNLLPICKLAKNGVYTTLVKDVRDAFEGSP 774
KPAAPVYPKLIQ+AP GLTK EADELR KGKNL+PIC+L KNGVY +LVKDVRDAFEGSP
Sbjct: 297 KPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLVKNGVYISLVKDVRDAFEGSP 356
Query: 773 LVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSKYPPAPVF-TPAK 597
LVKIDCKG+ SDYKK+GAKLK+LVPCVLLSFDDEQIL WRG WKS Y AP F P
Sbjct: 357 LVKIDCKGMHASDYKKIGAKLKELVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPVV 416
Query: 596 VGITRSLDNTGEGDDNQSKHNSSMVNTSPKMLSLWKSAIESNKALLLEKFDLGPDALLEK 417
+ L+ +G N + ++ V+ SPKM+SLWKSAIES+KALLL++ LGPDALL+
Sbjct: 417 ADVASGLEGSGIPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDETGLGPDALLKV 476
Query: 416 VEEFEGISQAMEHSHPAFPLLSEDGAEGAIANF 318
VEEFEGISQA EHS+PA + SEDG G A +
Sbjct: 477 VEEFEGISQATEHSYPALVMSSEDGTGGTKAEY 509
>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Vitis vinifera]
Length = 560
Score = 684 bits (1766), Expect = 0.0
Identities = 350/511 (68%), Positives = 388/511 (75%), Gaps = 2/511 (0%)
Frame = -3
Query: 1850 MVIVALSPSLPGRRNLFSSLPSTPPPHDPTTNSSATXXXXXXXXXXXXXXXXXXXXXXXX 1671
MVI+A +LPG +LFSSLP PPP+ TT++
Sbjct: 1 MVILA---TLPGSSSLFSSLPQGPPPNASTTSTPPQPPIPIPKYPPPLKSQKSPRPPTKP 57
Query: 1670 XXPGLK-YHRNSRYYKPVKHGGTITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKA 1494
P K H S+YYKPV G I SDGDRSV+IGESGVSYLL GAPFEFQ+SYSETPKA
Sbjct: 58 STPAFKTVHHRSKYYKPVSDG-VIASDGDRSVVIGESGVSYLLAGAPFEFQFSYSETPKA 116
Query: 1493 KPLAIREPAFLPFAPPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPF 1314
KPLAIREPAFLPFAPP+MPRPWTGKAPL KIP+FDSFNPPPPGTKGVK VEMPGPF
Sbjct: 117 KPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPF 176
Query: 1313 PMGKFPEEGKSREEILGEPLKKWEIRMLVKAMVKDNRQVNLGSDGLTHNMLELIHSHWXX 1134
P+GKFP EG++REEILGEPL K EIRMLVK + NRQVNLG DGLTHNMLELIHSHW
Sbjct: 177 PLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKR 236
Query: 1133 XXXXXXXXKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVMLW 954
KGVPT+DMDNVC H+EEKTGGKIIHRVGGVVYLFRGRNYNY TRPQYPVMLW
Sbjct: 237 QRVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLW 296
Query: 953 KPAAPVYPKLIQDAPGGLTKAEADELRTKGKNLLPICKLAKNGVYTTLVKDVRDAFEGSP 774
KPAAPVYPKLIQ+AP GLTK EADELR KG NL+PIC+L KNGVY +LVKDVRDAFEGSP
Sbjct: 297 KPAAPVYPKLIQEAPEGLTKFEADELRMKGXNLIPICRLVKNGVYISLVKDVRDAFEGSP 356
Query: 773 LVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSKYPPAPVF-TPAK 597
LVKIDCKG+ SDYKK+GAKLK+ VPCVLLSFDDEQIL WRG WKS Y AP F P
Sbjct: 357 LVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPVV 416
Query: 596 VGITRSLDNTGEGDDNQSKHNSSMVNTSPKMLSLWKSAIESNKALLLEKFDLGPDALLEK 417
+ L+ +G N + ++ V+ SPKM+SLWKSAIES+KALLL++ LGPDALL+
Sbjct: 417 ADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDEIGLGPDALLKV 476
Query: 416 VEEFEGISQAMEHSHPAFPLLSEDGAEGAIA 324
VEEFEGISQA EHS+PA + SEDG G A
Sbjct: 477 VEEFEGISQATEHSYPALVMSSEDGTGGTKA 507
>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 675 bits (1741), Expect = 0.0
Identities = 358/569 (62%), Positives = 407/569 (71%), Gaps = 6/569 (1%)
Frame = -3
Query: 1847 VIVALSPSLPGRRNLFSSLPSTPPPHDPTTNSSATXXXXXXXXXXXXXXXXXXXXXXXXX 1668
V +A PSLPG LFSSLPS PPPH+P+ SS +
Sbjct: 46 VTMATIPSLPGL-TLFSSLPSAPPPHEPSPTSSPSTPIPIPKYPPPKSRTLRTNNPPKSP 104
Query: 1667 XPGLK-YHRNSRYYKPVKHGGTITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKAK 1491
P LK +HR S+YYKPVK G I+S+G+R+V+IG+SGVSYLLPGAPFEFQYSYSETP K
Sbjct: 105 NPALKTFHRRSKYYKPVKDG-VISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVK 163
Query: 1490 PLAIREPAFLPFAPPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPFP 1311
P+AIREPAFLPFAPP+MPRPWTGKAPL KIP+FDSFNPPPPGTKGVK V++PGPFP
Sbjct: 164 PIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFP 223
Query: 1310 MGKFPEEGKSREEILGEPLKKWEIRMLVKAMVKDNRQVNLGSDGLTHNMLELIHSHWXXX 1131
+G++P+EGKSREEILGEPLK WEIRMLVK + NRQVNLG DGLTHNMLELIHSHW
Sbjct: 224 LGQYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 283
Query: 1130 XXXXXXXKGVPTVDMDNVCRHIEEKTGGKIIHRVGGVVYLFRGRNYNYSTRPQYPVMLWK 951
KGVPTVDMDN+C HIEEKTGGKIIHRVGGV+YLFRGRNYNY TRPQYPVMLWK
Sbjct: 284 RVCKVRCKGVPTVDMDNICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWK 343
Query: 950 PAAPVYPKLIQDAPGGLTKAEADELRTKGKNLLPICKLAKNGVYTTLVKDVRDAFEGSPL 771
PAAPVYPKLIQ+AP GLTK EA+ELR KGKNLLPICKLAKNGVY +LV DVR AFEGS L
Sbjct: 344 PAAPVYPKLIQEAPEGLTKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSIL 403
Query: 770 VKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSKYP---PAPVFTPA 600
VKIDC G+ SDYKKLGAKLK+LVPCVLLSFD+EQILMWRGKDWKS AP+ P+
Sbjct: 404 VKIDCTGMHESDYKKLGAKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPL--PS 461
Query: 599 KVGITRSLDNTGEGDDNQS--KHNSSMVNTSPKMLSLWKSAIESNKALLLEKFDLGPDAL 426
+ SL ++GE +N N + TSPKM LW+ AI+SNKAL+L++ L PD L
Sbjct: 462 RASSNDSLGSSGESVENSDLLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDEL 521
Query: 425 LEKVEEFEGISQAMEHSHPAFPLLSEDGAEGAIANFXXXXXXXXXXXXXXXXXXXXXXXX 246
LE+VEEFE ISQA EHS+PAF SE+ + A
Sbjct: 522 LERVEEFERISQATEHSYPAFITSSEEVSSPA---------DSPESQDHSEANYNSDDDV 572
Query: 245 XXXXXXXDIVDTSAQPGSLPVDLIVEKLN 159
D VD GSLPVD+I +KL+
Sbjct: 573 GREEDLFDNVDPLVPLGSLPVDIIAKKLS 601