BLASTX nr result

ID: Glycyrrhiza24_contig00013819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013819
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590265.1| CRM domain-containing protein, putative [Med...   169   2e-40
ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-contai...   164   9e-39
ref|XP_003590240.1| CRM domain-containing protein, putative [Med...   154   1e-35
ref|XP_003519710.1| PREDICTED: uncharacterized CRM domain-contai...   134   8e-30
ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-contai...   134   1e-29

>ref|XP_003590265.1| CRM domain-containing protein, putative [Medicago truncatula]
           gi|355479313|gb|AES60516.1| CRM domain-containing
           protein, putative [Medicago truncatula]
          Length = 443

 Score =  169 bits (428), Expect = 2e-40
 Identities = 86/114 (75%), Positives = 96/114 (84%)
 Frame = +3

Query: 3   IMSPRVTLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQLKSTAEGNTDAVEGIQE 182
           IMSPRVTL RKKALDKSKYRD LRAVRRYIP+LEQELEILRAQ +STAE NT+A EGIQ 
Sbjct: 253 IMSPRVTLPRKKALDKSKYRDGLRAVRRYIPKLEQELEILRAQFQSTAESNTEAAEGIQI 312

Query: 183 SDKASIEPDSVSNFELENSDKLRQMINDNSGCSENEEDIDSELDSCSDKLSDIF 344
           SDK S+EP SVSN +LE  DK+  M NDN+ CSE+E  +DS+LDS SDKLSDIF
Sbjct: 313 SDKVSVEPSSVSNLQLEKLDKVGAMFNDNNSCSEDEAHMDSDLDSYSDKLSDIF 366


>ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like, partial [Glycine max]
          Length = 383

 Score =  164 bits (414), Expect = 9e-39
 Identities = 86/114 (75%), Positives = 98/114 (85%)
 Frame = +3

Query: 3   IMSPRVTLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQLKSTAEGNTDAVEGIQE 182
           IMSPRV+LSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQ KS+AE NTDA E IQ 
Sbjct: 193 IMSPRVSLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQFKSSAESNTDAAEAIQN 252

Query: 183 SDKASIEPDSVSNFELENSDKLRQMINDNSGCSENEEDIDSELDSCSDKLSDIF 344
           S + SIE  S+SNF+L+NS K R+M+N N G +E+E D++SELDS SDKLSDIF
Sbjct: 253 SGRESIESGSISNFQLQNSYKDREMMNVNIGSTEDETDMNSELDSDSDKLSDIF 306


>ref|XP_003590240.1| CRM domain-containing protein, putative [Medicago truncatula]
           gi|355479288|gb|AES60491.1| CRM domain-containing
           protein, putative [Medicago truncatula]
          Length = 472

 Score =  154 bits (388), Expect = 1e-35
 Identities = 86/143 (60%), Positives = 96/143 (67%), Gaps = 29/143 (20%)
 Frame = +3

Query: 3   IMSPRVTLSRKK-----------------------------ALDKSKYRDALRAVRRYIP 95
           IMSPRVTL RKK                             ALDKSKYRD LRAVRRYIP
Sbjct: 253 IMSPRVTLPRKKVLHVPKDCLHHTIKDCFTFLFAYFPSLISALDKSKYRDGLRAVRRYIP 312

Query: 96  RLEQELEILRAQLKSTAEGNTDAVEGIQESDKASIEPDSVSNFELENSDKLRQMINDNSG 275
           +LEQELEILRAQ +STAE NT+A EGIQ SDK S+EP SVSN +LE  DK+  M NDN+ 
Sbjct: 313 KLEQELEILRAQFQSTAESNTEAAEGIQISDKVSVEPSSVSNLQLEKLDKVGAMFNDNNS 372

Query: 276 CSENEEDIDSELDSCSDKLSDIF 344
           CSE+E  +DS+LDS SDKLSDIF
Sbjct: 373 CSEDEAHMDSDLDSYSDKLSDIF 395


>ref|XP_003519710.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Glycine max]
          Length = 382

 Score =  134 bits (337), Expect = 8e-30
 Identities = 74/114 (64%), Positives = 84/114 (73%)
 Frame = +3

Query: 3   IMSPRVTLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQLKSTAEGNTDAVEGIQE 182
           IMSPRV+LSRKKALDKSKYRDALRAVRR+IPRLEQELEILRAQ KS+AE NTDA E IQ 
Sbjct: 213 IMSPRVSLSRKKALDKSKYRDALRAVRRHIPRLEQELEILRAQFKSSAESNTDAAEAIQN 272

Query: 183 SDKASIEPDSVSNFELENSDKLRQMINDNSGCSENEEDIDSELDSCSDKLSDIF 344
           +                     R+ +NDN GC+E+E D++SELDS SDKLSDIF
Sbjct: 273 N---------------------RERMNDNIGCTEDETDMNSELDSDSDKLSDIF 305


>ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Vitis vinifera]
          Length = 401

 Score =  134 bits (336), Expect = 1e-29
 Identities = 69/114 (60%), Positives = 85/114 (74%)
 Frame = +3

Query: 3   IMSPRVTLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQLKSTAEGNTDAVEGIQE 182
           IMSPR+TLSRKKALDKSKYRD LRAVR+YIPRLE +LE+L+AQ K  AE  T+AVE  Q 
Sbjct: 208 IMSPRITLSRKKALDKSKYRDGLRAVRKYIPRLEGDLELLQAQAKMQAENKTEAVEDFQN 267

Query: 183 SDKASIEPDSVSNFELENSDKLRQMINDNSGCSENEEDIDSELDSCSDKLSDIF 344
           ++  SI    +SN + ENSDKLR+++  N+  SE E   DS  +SCS+ LSDIF
Sbjct: 268 ANIDSINSQGISNLQPENSDKLRELLAGNNESSEEESLTDSGTESCSEALSDIF 321


Top