BLASTX nr result
ID: Glycyrrhiza24_contig00013818
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00013818
(639 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containin... 332 3e-89
ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|2... 220 2e-55
ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|2... 216 3e-54
ref|XP_003524573.1| PREDICTED: katanin p80 WD40 repeat-containin... 200 3e-54
ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus commu... 207 2e-51
>ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Glycine max]
Length = 758
Score = 332 bits (852), Expect = 3e-89
Identities = 173/213 (81%), Positives = 184/213 (86%)
Frame = -1
Query: 639 DKNNFPASVSSIQDESRGQKMNRDVCSIEIQKRGRMRSLLNLEKKERSLNYEGPRQGISH 460
DKNNFPASVSS QDE+RG K+NRDVCS+E+QK GRMRSLLNLEK+ERSLNYEGPRQGISH
Sbjct: 500 DKNNFPASVSSTQDEARGLKVNRDVCSVEVQKGGRMRSLLNLEKRERSLNYEGPRQGISH 559
Query: 459 GRISSVHVLPFSGRAHSISTEKATFSANDEDSIADVMEQHDEFISSMQARSAKLQVVFRC 280
GRISSVHVLPFSGRAHSISTEKAT SA DEDSIADVMEQHDEF+SSM ARSAKLQ+VFRC
Sbjct: 560 GRISSVHVLPFSGRAHSISTEKATVSATDEDSIADVMEQHDEFLSSMLARSAKLQMVFRC 619
Query: 279 WERNDVKEVIGTMAKMDDHAVIADIVSIIMEKIXXXXXXXXXXXXXXXXXXLQSEMDRHL 100
WERNDVKEVIG MA+MDDHAVIAD+VSIIMEKI LQSEM+RHL
Sbjct: 620 WERNDVKEVIGIMARMDDHAVIADVVSIIMEKIDIITLEICAGLLPLLTDLLQSEMERHL 679
Query: 99 AISLEMLLKLVRIFGSVIYSTLSAKPSVGVDIE 1
ISLEMLLKLVRIFGSVIYST+SA VGVDIE
Sbjct: 680 GISLEMLLKLVRIFGSVIYSTVSATQPVGVDIE 712
>ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|222851705|gb|EEE89252.1|
predicted protein [Populus trichocarpa]
Length = 802
Score = 220 bits (561), Expect = 2e-55
Identities = 124/212 (58%), Positives = 149/212 (70%), Gaps = 4/212 (1%)
Frame = -1
Query: 624 PASVSSIQDESRGQKMNRDVCSIEIQKRGRMRSLL-NLEKKERSLNYEGPRQGISHGRIS 448
P S E+RG K+NRD +IE QK GRMRSL+ N EK+ RS +YEGP G S G S
Sbjct: 544 PTSYQEENCETRGHKINRDAPTIESQKGGRMRSLMINWEKRGRSSSYEGPTSGTSTGTGS 603
Query: 447 SVHVLP---FSGRAHSISTEKATFSANDEDSIADVMEQHDEFISSMQARSAKLQVVFRCW 277
V+VLP F R + S EK T SA DED IAD+MEQHD+F+SSMQ+RSAKLQVV+R W
Sbjct: 604 VVNVLPLNMFKQRGRTPSIEKETVSAFDEDVIADLMEQHDQFVSSMQSRSAKLQVVYRYW 663
Query: 276 ERNDVKEVIGTMAKMDDHAVIADIVSIIMEKIXXXXXXXXXXXXXXXXXXLQSEMDRHLA 97
ERNDVK IG M KM DHAV++D++SI+ +KI L+S+MDRHL+
Sbjct: 664 ERNDVKGAIGAMEKMADHAVLSDVISIVADKIDIVTLDICTCLLPLLTNMLESDMDRHLS 723
Query: 96 ISLEMLLKLVRIFGSVIYSTLSAKPSVGVDIE 1
ISL+MLLKLVR+FGS+IYSTLSA SVGVDIE
Sbjct: 724 ISLDMLLKLVRMFGSMIYSTLSASTSVGVDIE 755
>ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|222865464|gb|EEF02595.1|
predicted protein [Populus trichocarpa]
Length = 728
Score = 216 bits (550), Expect = 3e-54
Identities = 122/203 (60%), Positives = 144/203 (70%), Gaps = 4/203 (1%)
Frame = -1
Query: 597 ESRGQKMNRDVCSIEIQKRGRMRSLL-NLEKKERSLNYEGPRQGISHGRISSVHVLP--- 430
E+RG K+NRD SIE QK GRMRSL+ N EK+ S +YEGP GIS G S V+VLP
Sbjct: 479 ETRGHKINRDAPSIESQKGGRMRSLMINWEKRGSSPSYEGPTSGISAGTSSVVNVLPLHM 538
Query: 429 FSGRAHSISTEKATFSANDEDSIADVMEQHDEFISSMQARSAKLQVVFRCWERNDVKEVI 250
F R + S EK SA+DED IAD+MEQHD+F+SSMQ+RSAKLQVV R WERNDVK I
Sbjct: 539 FKQRGRAPSIEKEMVSASDEDVIADLMEQHDQFVSSMQSRSAKLQVVHRYWERNDVKGAI 598
Query: 249 GTMAKMDDHAVIADIVSIIMEKIXXXXXXXXXXXXXXXXXXLQSEMDRHLAISLEMLLKL 70
G M KM DHAV+AD++SI+ +KI L+S+MDRH +ISL+MLLKL
Sbjct: 599 GAMGKMADHAVLADVISIVADKIDTVTLDICTCLLPLLTNLLESDMDRHSSISLDMLLKL 658
Query: 69 VRIFGSVIYSTLSAKPSVGVDIE 1
VR FGS+IYSTLSA SVGVDIE
Sbjct: 659 VRTFGSMIYSTLSASTSVGVDIE 681
>ref|XP_003524573.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Glycine max]
Length = 200
Score = 200 bits (509), Expect(2) = 3e-54
Identities = 108/139 (77%), Positives = 113/139 (81%)
Frame = -1
Query: 417 AHSISTEKATFSANDEDSIADVMEQHDEFISSMQARSAKLQVVFRCWERNDVKEVIGTMA 238
AHSISTEKAT SA DEDSIADVMEQHDEF+SSM ARSAKLQ+VFRCWERNDVKEVIG MA
Sbjct: 15 AHSISTEKATISATDEDSIADVMEQHDEFLSSMLARSAKLQMVFRCWERNDVKEVIGIMA 74
Query: 237 KMDDHAVIADIVSIIMEKIXXXXXXXXXXXXXXXXXXLQSEMDRHLAISLEMLLKLVRIF 58
KMDDHAVIAD+VSIIMEKI LQSEM+RHL ISLEMLLKLVRIF
Sbjct: 75 KMDDHAVIADVVSIIMEKIDIITLEICAGLLPLLTDLLQSEMERHLGISLEMLLKLVRIF 134
Query: 57 GSVIYSTLSAKPSVGVDIE 1
GSVIYST+SA VGVDIE
Sbjct: 135 GSVIYSTVSATQPVGVDIE 153
Score = 37.4 bits (85), Expect(2) = 3e-54
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 461 MEGYHQFMCSLSVGEH 414
MEGYHQFMCSLSVG H
Sbjct: 1 MEGYHQFMCSLSVGAH 16
>ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis]
gi|223547170|gb|EEF48666.1| katanin P80 subunit, putative
[Ricinus communis]
Length = 803
Score = 207 bits (526), Expect = 2e-51
Identities = 118/212 (55%), Positives = 143/212 (67%), Gaps = 4/212 (1%)
Frame = -1
Query: 624 PASVSSIQDESRGQKMNRDVCSIEIQKRGRMRSL-LNLEKKERSLNYEGPRQGISHGRIS 448
P S E+RG K+NRD S+E QK GRMRSL +N EK+ RS NYEGP G S S
Sbjct: 545 PVSYQEENYETRGHKLNRDATSLEGQKAGRMRSLVINWEKRGRSPNYEGPISGSSPETAS 604
Query: 447 SVHVLPFS---GRAHSISTEKATFSANDEDSIADVMEQHDEFISSMQARSAKLQVVFRCW 277
SV++L F+ R S +TEK SA+DED+IADVMEQHD+F+SSMQ+R KLQ V R W
Sbjct: 605 SVNMLSFNMLKQRGCSPTTEKEMVSASDEDAIADVMEQHDQFVSSMQSRFGKLQAVHRFW 664
Query: 276 ERNDVKEVIGTMAKMDDHAVIADIVSIIMEKIXXXXXXXXXXXXXXXXXXLQSEMDRHLA 97
ERNDVK I M KM DH V+AD++S+I EKI L+S+MDRHL+
Sbjct: 665 ERNDVKGAISAMEKMADHGVLADVISVINEKIDIVTLDVCTCLLPLLAGLLESDMDRHLS 724
Query: 96 ISLEMLLKLVRIFGSVIYSTLSAKPSVGVDIE 1
ISL++LLKLVR FGS+IYST+SA VGVDIE
Sbjct: 725 ISLDVLLKLVRTFGSMIYSTVSASTPVGVDIE 756