BLASTX nr result

ID: Glycyrrhiza24_contig00013811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013811
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [...   225   3e-57
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...   224   4e-57
emb|CBI36846.3| unnamed protein product [Vitis vinifera]              224   4e-57
ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinu...   224   7e-57
gb|EEE54264.1| hypothetical protein OsJ_01156 [Oryza sativa Japo...   209   2e-52

>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355480579|gb|AES61782.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1035

 Score =  225 bits (574), Expect = 3e-57
 Identities = 116/150 (77%), Positives = 125/150 (83%), Gaps = 2/150 (1%)
 Frame = -3

Query: 444 ESTFRVHILHRSIDTEQALMAMKISKSHRKI--ILATNIAESSVTIPKVAHVIDSCRSLQ 271
           ESTFRVHILH SIDTEQALM MKI KSHRK+  ILATNIAESSVTIPKVA+VIDSCRSLQ
Sbjct: 311 ESTFRVHILHGSIDTEQALMTMKIWKSHRKVVVILATNIAESSVTIPKVAYVIDSCRSLQ 370

Query: 270 VSWDKSRRKERAELVWVSKSQAEQRRGRTGRTCDGQVYRLVTRSFYNNLQDHESPAXXXX 91
           V WDKSR+K+ + LVWVSKSQA+QR GRTGRTCDGQVYRLV  SFYN+L+DHE+P     
Sbjct: 371 VYWDKSRKKDCSALVWVSKSQAKQRSGRTGRTCDGQVYRLVPGSFYNDLEDHETPVILKL 430

Query: 90  XXXXXXXXLCCAGSKAINDPKVLLQKALDP 1
                    CCAGSKAINDPKVLLQKALDP
Sbjct: 431 SLRLQILSSCCAGSKAINDPKVLLQKALDP 460


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
           vinifera]
          Length = 1014

 Score =  224 bits (572), Expect = 4e-57
 Identities = 112/147 (76%), Positives = 124/147 (84%)
 Frame = -3

Query: 441 STFRVHILHRSIDTEQALMAMKISKSHRKIILATNIAESSVTIPKVAHVIDSCRSLQVSW 262
           S F++HILHRSIDTEQALMAMKI KSHRK+ILATNIAESSVTIPKVA+VIDSCRSLQV W
Sbjct: 290 SCFKIHILHRSIDTEQALMAMKIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFW 349

Query: 261 DKSRRKERAELVWVSKSQAEQRRGRTGRTCDGQVYRLVTRSFYNNLQDHESPAXXXXXXX 82
           D +R+KE +EL WVSKSQAEQRRGRTGRTCDGQV+RLVT SF+N LQD+E PA       
Sbjct: 350 DSNRKKEASELTWVSKSQAEQRRGRTGRTCDGQVFRLVTGSFFNKLQDYEPPAILRLSLR 409

Query: 81  XXXXXLCCAGSKAINDPKVLLQKALDP 1
                +CCA  +AINDPKVLLQKALDP
Sbjct: 410 QQVLLICCAEPRAINDPKVLLQKALDP 436


>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score =  224 bits (572), Expect = 4e-57
 Identities = 112/147 (76%), Positives = 124/147 (84%)
 Frame = -3

Query: 441 STFRVHILHRSIDTEQALMAMKISKSHRKIILATNIAESSVTIPKVAHVIDSCRSLQVSW 262
           S F++HILHRSIDTEQALMAMKI KSHRK+ILATNIAESSVTIPKVA+VIDSCRSLQV W
Sbjct: 290 SCFKIHILHRSIDTEQALMAMKIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFW 349

Query: 261 DKSRRKERAELVWVSKSQAEQRRGRTGRTCDGQVYRLVTRSFYNNLQDHESPAXXXXXXX 82
           D +R+KE +EL WVSKSQAEQRRGRTGRTCDGQV+RLVT SF+N LQD+E PA       
Sbjct: 350 DSNRKKEASELTWVSKSQAEQRRGRTGRTCDGQVFRLVTGSFFNKLQDYEPPAILRLSLR 409

Query: 81  XXXXXLCCAGSKAINDPKVLLQKALDP 1
                +CCA  +AINDPKVLLQKALDP
Sbjct: 410 QQVLLICCAEPRAINDPKVLLQKALDP 436


>ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537643|gb|EEF39266.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1025

 Score =  224 bits (570), Expect = 7e-57
 Identities = 111/147 (75%), Positives = 126/147 (85%)
 Frame = -3

Query: 441 STFRVHILHRSIDTEQALMAMKISKSHRKIILATNIAESSVTIPKVAHVIDSCRSLQVSW 262
           S F+VHILH SIDTEQAL+AMKI KSHRK+ILATNIAESSVTIPKVA+VIDSCRSLQV W
Sbjct: 294 SCFKVHILHGSIDTEQALLAMKIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFW 353

Query: 261 DKSRRKERAELVWVSKSQAEQRRGRTGRTCDGQVYRLVTRSFYNNLQDHESPAXXXXXXX 82
           D +R+K+ AELVWVSKSQA+QR+GRTGRTCDGQ+YRLVTRSF+N LQ++ESPA       
Sbjct: 354 DGTRKKDYAELVWVSKSQADQRKGRTGRTCDGQIYRLVTRSFFNKLQEYESPAILRLSLR 413

Query: 81  XXXXXLCCAGSKAINDPKVLLQKALDP 1
                +CCA SKAINDP+VLLQK LDP
Sbjct: 414 QQVLMVCCAESKAINDPRVLLQKTLDP 440


>gb|EEE54264.1| hypothetical protein OsJ_01156 [Oryza sativa Japonica Group]
          Length = 1019

 Score =  209 bits (531), Expect = 2e-52
 Identities = 104/147 (70%), Positives = 118/147 (80%)
 Frame = -3

Query: 441 STFRVHILHRSIDTEQALMAMKISKSHRKIILATNIAESSVTIPKVAHVIDSCRSLQVSW 262
           S F+VHILHRSIDT++AL  MK+SKS RK+ILATNIAESSVTIP VA+VIDSCRSLQV W
Sbjct: 303 SMFKVHILHRSIDTDEALQTMKVSKSCRKVILATNIAESSVTIPGVAYVIDSCRSLQVYW 362

Query: 261 DKSRRKERAELVWVSKSQAEQRRGRTGRTCDGQVYRLVTRSFYNNLQDHESPAXXXXXXX 82
           D  R+ + AELVWVSKSQAEQR+GRTGRTCDGQ+YRLVT  FYN+L DHE PA       
Sbjct: 363 DPIRKTDSAELVWVSKSQAEQRKGRTGRTCDGQIYRLVTGPFYNSLTDHEYPAILRLSLR 422

Query: 81  XXXXXLCCAGSKAINDPKVLLQKALDP 1
                +CCA S+A+NDP VLLQK LDP
Sbjct: 423 EQVLMICCAESRAMNDPHVLLQKVLDP 449


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