BLASTX nr result

ID: Glycyrrhiza24_contig00013800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013800
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48456.1| unknown [Lotus japonicus]                              498   e-138
ref|XP_003593528.1| Splicing factor U2af large subunit B [Medica...   473   e-131
ref|XP_002329812.1| predicted protein [Populus trichocarpa] gi|2...   430   e-118
ref|XP_002305148.1| predicted protein [Populus trichocarpa] gi|2...   429   e-118
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela...   380   e-103

>gb|AFK48456.1| unknown [Lotus japonicus]
          Length = 527

 Score =  498 bits (1281), Expect = e-138
 Identities = 247/291 (84%), Positives = 268/291 (92%)
 Frame = +2

Query: 2    ASNAMALDGIIFEGVAVRVRRPTDYNPSLAAALGPCQPSPYLNLSAVGLSVGAIGGGAEG 181
            ASNAM+LDGI+FEGV+VRVRRPTDYNP+LAAALGPCQPSPYLNLSAVGLS G IGG  +G
Sbjct: 239  ASNAMSLDGIVFEGVSVRVRRPTDYNPTLAAALGPCQPSPYLNLSAVGLSGGTIGG-TDG 297

Query: 182  LDRIFVGGLPYYFTEAQMRELLQAFGPLRSFDLVRDKDTGNSKGYGFCIYEDPAVTDIAC 361
            LDRIFVGGLPYYF E Q+RELLQAFGPLRSFDLVRDK+TGNSKGYGFCIY+DPAVTD+AC
Sbjct: 298  LDRIFVGGLPYYFAEEQIRELLQAFGPLRSFDLVRDKETGNSKGYGFCIYQDPAVTDMAC 357

Query: 362  ASLNGLKMGDKTLTVRRATVSTGHSKTEQEHIFARAQQHIAMQKIALEVGGLNIPGVERM 541
            ASLNGLK+GDKTLTVRRATVS GHSKTEQEHIFA+AQQ+I MQK+ALEV GLNIPGVER+
Sbjct: 358  ASLNGLKVGDKTLTVRRATVS-GHSKTEQEHIFAQAQQNITMQKVALEVVGLNIPGVERV 416

Query: 542  PITNDESPTKVLCLTEAITTDQLMDNGEYDEILEDMRDECCKFGTLMNVVIPRPNNSGEL 721
            P T DES TKVLCLTEAITTD+LMDNGEY+EI+EDMRDEC KFGTLMNVVIPRPN SGE 
Sbjct: 417  PTTIDESATKVLCLTEAITTDELMDNGEYEEIVEDMRDECGKFGTLMNVVIPRPNPSGEQ 476

Query: 722  PPGVGKVFLEYSDCAGCLAAKKALNGRKFGGNCVTAVYYPEEKYHSMEYDL 874
             PG+GKVFLEYSD A   AAK ALNGRKFGGN VTA YYPEEK+H+ME+DL
Sbjct: 477  TPGIGKVFLEYSDTAASFAAKSALNGRKFGGNMVTAYYYPEEKFHNMEFDL 527


>ref|XP_003593528.1| Splicing factor U2af large subunit B [Medicago truncatula]
            gi|355482576|gb|AES63779.1| Splicing factor U2af large
            subunit B [Medicago truncatula]
          Length = 593

 Score =  473 bits (1217), Expect = e-131
 Identities = 238/282 (84%), Positives = 254/282 (90%)
 Frame = +2

Query: 29   IIFEGVAVRVRRPTDYNPSLAAALGPCQPSPYLNLSAVGLSVGAIGGGAEGLDRIFVGGL 208
            +I  GVAVRVRRPTDYNPSLAA LGPCQPS  LNLSAVGLS G IGG AEGLDRIFVGGL
Sbjct: 318  LIHVGVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTIGG-AEGLDRIFVGGL 376

Query: 209  PYYFTEAQMRELLQAFGPLRSFDLVRDKDTGNSKGYGFCIYEDPAVTDIACASLNGLKMG 388
            PYYFTE QMRELLQAFGPLRSFD+VRDK+TGNSKGYGFCIY+DPAVTDIACA+LNGLKMG
Sbjct: 377  PYYFTEVQMRELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAVTDIACAALNGLKMG 436

Query: 389  DKTLTVRRATVSTGHSKTEQEHIFARAQQHIAMQKIALEVGGLNIPGVERMPITNDESPT 568
            DKTLTVRRATVS  HSK E+++IFARAQQHIAMQKIALEV GLNIPGV     TNDESPT
Sbjct: 437  DKTLTVRRATVSA-HSKPEEDNIFARAQQHIAMQKIALEVVGLNIPGVP----TNDESPT 491

Query: 569  KVLCLTEAITTDQLMDNGEYDEILEDMRDECCKFGTLMNVVIPRPNNSGELPPGVGKVFL 748
            KVLCLTEA+TT+QL DNGEY+EILEDMRDEC KFGTL+NVVIPRPN +GEL  G+GKVFL
Sbjct: 492  KVLCLTEAVTTEQLTDNGEYEEILEDMRDECRKFGTLVNVVIPRPNPNGELSTGIGKVFL 551

Query: 749  EYSDCAGCLAAKKALNGRKFGGNCVTAVYYPEEKYHSMEYDL 874
            EYSDC  CLAAK ALNGRKFGG+ VTA YYPEEKYHSM+YDL
Sbjct: 552  EYSDCTACLAAKNALNGRKFGGSIVTAFYYPEEKYHSMDYDL 593


>ref|XP_002329812.1| predicted protein [Populus trichocarpa] gi|222870874|gb|EEF08005.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  430 bits (1106), Expect = e-118
 Identities = 214/301 (71%), Positives = 248/301 (82%)
 Frame = +2

Query: 2   ASNAMALDGIIFEGVAVRVRRPTDYNPSLAAALGPCQPSPYLNLSAVGLSVGAIGGGAEG 181
           ASNAM LDGIIFEGVAVRVRRPTDYNPSLAA LGP QPSP LNL+AVGL  G I G AEG
Sbjct: 7   ASNAMTLDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSPLLNLAAVGLVPGTISG-AEG 65

Query: 182 LDRIFVGGLPYYFTEAQMRELLQAFGPLRSFDLVRDKDTGNSKGYGFCIYEDPAVTDIAC 361
            DR+FVGGLPYYFTE Q+RELL++FGPLR FDLV+D+DTGNSKGYGFC+Y+DPAVTDIAC
Sbjct: 66  PDRVFVGGLPYYFTETQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 125

Query: 362 ASLNGLKMGDKTLTVRRATVSTGHSKTEQEHIFARAQQHIAMQKIALEVGGLNIPGVERM 541
           A+LNGLKMGDKTLTVRR T S G S++EQE+I A+AQQHIA+QK+AL+ G +N+PGV   
Sbjct: 126 AALNGLKMGDKTLTVRRGTESGGQSRSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIP 185

Query: 542 PITNDESPTKVLCLTEAITTDQLMDNGEYDEILEDMRDECCKFGTLMNVVIPRPNNSGEL 721
              +  SP+KVLCLTEAI  + L D+ EY+EILEDMR+ECCKFGTL+NVVIPRP+ + E 
Sbjct: 186 LAESSHSPSKVLCLTEAIAMEVLADDEEYEEILEDMREECCKFGTLINVVIPRPSQTEEQ 245

Query: 722 PPGVGKVFLEYSDCAGCLAAKKALNGRKFGGNCVTAVYYPEEKYHSMEYDL*SNMGIIII 901
             G GKVFLEYSD + C  A+ ALNGRKFGGN V A YYPE+KYH+ +Y L  N+   II
Sbjct: 246 ISGAGKVFLEYSDTSSCANARNALNGRKFGGNTVNASYYPEDKYHNGDYVLYGNLYYQII 305

Query: 902 Y 904
           Y
Sbjct: 306 Y 306


>ref|XP_002305148.1| predicted protein [Populus trichocarpa] gi|222848112|gb|EEE85659.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  429 bits (1103), Expect = e-118
 Identities = 213/289 (73%), Positives = 244/289 (84%)
 Frame = +2

Query: 2   ASNAMALDGIIFEGVAVRVRRPTDYNPSLAAALGPCQPSPYLNLSAVGLSVGAIGGGAEG 181
           ASNAMALDGIIFEGVAVRVRRPTDYNPSLAA LGP QPSP LNL+AVGL  G I G AEG
Sbjct: 7   ASNAMALDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSPLLNLAAVGLVPGTISG-AEG 65

Query: 182 LDRIFVGGLPYYFTEAQMRELLQAFGPLRSFDLVRDKDTGNSKGYGFCIYEDPAVTDIAC 361
            DR+FVGGLPYYFTE Q+RELL++FGPLR FDLV+D+DTGNSKGYGFC+Y+DPAVTDIAC
Sbjct: 66  PDRVFVGGLPYYFTEIQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 125

Query: 362 ASLNGLKMGDKTLTVRRATVSTGHSKTEQEHIFARAQQHIAMQKIALEVGGLNIPGVERM 541
           A+LNGLKMGDKTLTVRRAT S G SK+EQE+I A+AQQHIA+QK+AL+ G +N+PGV   
Sbjct: 126 AALNGLKMGDKTLTVRRATESGGQSKSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIP 185

Query: 542 PITNDESPTKVLCLTEAITTDQLMDNGEYDEILEDMRDECCKFGTLMNVVIPRPNNSGEL 721
              +  +P+KVLCLTEAIT + L D+ EY+EILEDMR+ECCKFGTL+NVVIPRP+ + E 
Sbjct: 186 LAESAYTPSKVLCLTEAITMEVLADDEEYEEILEDMREECCKFGTLINVVIPRPSQNEEK 245

Query: 722 PPGVGKVFLEYSDCAGCLAAKKALNGRKFGGNCVTAVYYPEEKYHSMEY 868
            PG GKVFLEYSD   C  A+ ALNGRKFGGN V A YYPEEKY + +Y
Sbjct: 246 MPGAGKVFLEYSDTISCANARNALNGRKFGGNTVNAFYYPEEKYSNGDY 294


>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
            gi|300142484|gb|EFJ09184.1| hypothetical protein
            SELMODRAFT_160385 [Selaginella moellendorffii]
          Length = 421

 Score =  380 bits (977), Expect = e-103
 Identities = 187/296 (63%), Positives = 241/296 (81%), Gaps = 5/296 (1%)
 Frame = +2

Query: 2    ASNAMALDGIIFEGVAVRVRRPTDYNPSLAAALGPCQPSPYLNLSAVGLSVGAIGGGAEG 181
            ASNAMALDGIIFEGV+VRVRRP+DYNPS+AA LGP QPSP+LNL+AVGL+ GA  GGA+G
Sbjct: 123  ASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSPHLNLAAVGLTPGA-AGGADG 181

Query: 182  LDRIFVGGLPYYFTEAQMRELLQAFGPLRSFDLVRDKDTGNSKGYGFCIYEDPAVTDIAC 361
             DRIFVGGLPYY TE Q++ELL++FGPLR FDLV+D+DTGNSKGYGFC+Y+DPAVTD+AC
Sbjct: 182  PDRIFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVAC 241

Query: 362  ASLNGLKMGDKTLTVRRATVS--TGHSKTEQEHIFARAQQHIAMQKIALEVG---GLNIP 526
            A+LNGLKMGDKTLTVRRAT S  +G  K +Q ++ A+AQQ IA+QK+AL+      + +P
Sbjct: 242  AALNGLKMGDKTLTVRRATASVHSGQPKPDQANVLAQAQQQIALQKLALQGAPYYNMMMP 301

Query: 527  GVERMPITNDESPTKVLCLTEAITTDQLMDNGEYDEILEDMRDECCKFGTLMNVVIPRPN 706
            GV+   +T  E+PTKV+CL + ++ D+L ++ EY+EILEDMR+EC K+G++  +V+PRP 
Sbjct: 302  GVDN-GMTMPETPTKVVCLKQVVSPDELKEDDEYEEILEDMREECGKYGSVATLVLPRPK 360

Query: 707  NSGELPPGVGKVFLEYSDCAGCLAAKKALNGRKFGGNCVTAVYYPEEKYHSMEYDL 874
            + GE   GVGKVF+EY+     + AK +LNGRKFGGN V AVY+PE+K+   EY++
Sbjct: 361  SDGEEVAGVGKVFVEYATIEEAIKAKNSLNGRKFGGNIVAAVYFPEDKFLQGEYNV 416


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