BLASTX nr result

ID: Glycyrrhiza24_contig00013792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013792
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]               92   3e-25
ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein S...    92   1e-24
gb|AFK42989.1| unknown [Lotus japonicus]                               92   1e-24
ref|XP_003518666.1| PREDICTED: small nuclear ribonucleoprotein S...    92   1e-24
gb|AFK42488.1| unknown [Medicago truncatula]                           92   1e-24

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score = 92.0 bits (227), Expect(2) = 3e-25
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +3

Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371
           GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 61  GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 104



 Score = 48.1 bits (113), Expect(2) = 3e-25
 Identities = 27/36 (75%), Positives = 27/36 (75%)
 Frame = +2

Query: 23  FLCDPAFHLLFSATMKLVRFLMKLNNETVSIELKNG 130
           FL   A   L S  MKLVRFLMKLNNETVSIELKNG
Sbjct: 17  FLAVFAGFRLHSPKMKLVRFLMKLNNETVSIELKNG 52


>ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
           [Glycine max]
          Length = 126

 Score = 92.0 bits (227), Expect(2) = 1e-24
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +3

Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371
           GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 41  GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 84



 Score = 45.8 bits (107), Expect(2) = 1e-24
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +2

Query: 65  MKLVRFLMKLNNETVSIELKNG 130
           MKLVRFLMKLNNETVSIELKNG
Sbjct: 1   MKLVRFLMKLNNETVSIELKNG 22


>gb|AFK42989.1| unknown [Lotus japonicus]
          Length = 116

 Score = 92.0 bits (227), Expect(2) = 1e-24
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +3

Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371
           GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 31  GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74



 Score = 45.8 bits (107), Expect(2) = 1e-24
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +2

Query: 65  MKLVRFLMKLNNETVSIELKNG 130
           MKLVRFLMKLNNETVSIELKNG
Sbjct: 1   MKLVRFLMKLNNETVSIELKNG 22


>ref|XP_003518666.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Glycine max]
          Length = 116

 Score = 92.0 bits (227), Expect(2) = 1e-24
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +3

Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371
           GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 31  GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74



 Score = 45.8 bits (107), Expect(2) = 1e-24
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +2

Query: 65  MKLVRFLMKLNNETVSIELKNG 130
           MKLVRFLMKLNNETVSIELKNG
Sbjct: 1   MKLVRFLMKLNNETVSIELKNG 22


>gb|AFK42488.1| unknown [Medicago truncatula]
          Length = 115

 Score = 92.0 bits (227), Expect(2) = 1e-24
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +3

Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371
           GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 31  GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74



 Score = 45.8 bits (107), Expect(2) = 1e-24
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +2

Query: 65  MKLVRFLMKLNNETVSIELKNG 130
           MKLVRFLMKLNNETVSIELKNG
Sbjct: 1   MKLVRFLMKLNNETVSIELKNG 22


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