BLASTX nr result
ID: Glycyrrhiza24_contig00013792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00013792 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32365.3| unnamed protein product [Vitis vinifera] 92 3e-25 ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein S... 92 1e-24 gb|AFK42989.1| unknown [Lotus japonicus] 92 1e-24 ref|XP_003518666.1| PREDICTED: small nuclear ribonucleoprotein S... 92 1e-24 gb|AFK42488.1| unknown [Medicago truncatula] 92 1e-24 >emb|CBI32365.3| unnamed protein product [Vitis vinifera] Length = 144 Score = 92.0 bits (227), Expect(2) = 3e-25 Identities = 44/44 (100%), Positives = 44/44 (100%) Frame = +3 Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL Sbjct: 61 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 104 Score = 48.1 bits (113), Expect(2) = 3e-25 Identities = 27/36 (75%), Positives = 27/36 (75%) Frame = +2 Query: 23 FLCDPAFHLLFSATMKLVRFLMKLNNETVSIELKNG 130 FL A L S MKLVRFLMKLNNETVSIELKNG Sbjct: 17 FLAVFAGFRLHSPKMKLVRFLMKLNNETVSIELKNG 52 >ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2 [Glycine max] Length = 126 Score = 92.0 bits (227), Expect(2) = 1e-24 Identities = 44/44 (100%), Positives = 44/44 (100%) Frame = +3 Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL Sbjct: 41 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 84 Score = 45.8 bits (107), Expect(2) = 1e-24 Identities = 22/22 (100%), Positives = 22/22 (100%) Frame = +2 Query: 65 MKLVRFLMKLNNETVSIELKNG 130 MKLVRFLMKLNNETVSIELKNG Sbjct: 1 MKLVRFLMKLNNETVSIELKNG 22 >gb|AFK42989.1| unknown [Lotus japonicus] Length = 116 Score = 92.0 bits (227), Expect(2) = 1e-24 Identities = 44/44 (100%), Positives = 44/44 (100%) Frame = +3 Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL Sbjct: 31 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74 Score = 45.8 bits (107), Expect(2) = 1e-24 Identities = 22/22 (100%), Positives = 22/22 (100%) Frame = +2 Query: 65 MKLVRFLMKLNNETVSIELKNG 130 MKLVRFLMKLNNETVSIELKNG Sbjct: 1 MKLVRFLMKLNNETVSIELKNG 22 >ref|XP_003518666.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1 [Glycine max] Length = 116 Score = 92.0 bits (227), Expect(2) = 1e-24 Identities = 44/44 (100%), Positives = 44/44 (100%) Frame = +3 Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL Sbjct: 31 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74 Score = 45.8 bits (107), Expect(2) = 1e-24 Identities = 22/22 (100%), Positives = 22/22 (100%) Frame = +2 Query: 65 MKLVRFLMKLNNETVSIELKNG 130 MKLVRFLMKLNNETVSIELKNG Sbjct: 1 MKLVRFLMKLNNETVSIELKNG 22 >gb|AFK42488.1| unknown [Medicago truncatula] Length = 115 Score = 92.0 bits (227), Expect(2) = 1e-24 Identities = 44/44 (100%), Positives = 44/44 (100%) Frame = +3 Query: 240 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 371 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL Sbjct: 31 GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74 Score = 45.8 bits (107), Expect(2) = 1e-24 Identities = 22/22 (100%), Positives = 22/22 (100%) Frame = +2 Query: 65 MKLVRFLMKLNNETVSIELKNG 130 MKLVRFLMKLNNETVSIELKNG Sbjct: 1 MKLVRFLMKLNNETVSIELKNG 22