BLASTX nr result

ID: Glycyrrhiza24_contig00013676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013676
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591673.1| Ring finger protein [Medicago truncatula] gi...   131   5e-29
gb|AFK46438.1| unknown [Lotus japonicus]                              120   2e-25
gb|AFK47405.1| unknown [Lotus japonicus]                              119   3e-25
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...    93   3e-17
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...    88   7e-16

>ref|XP_003591673.1| Ring finger protein [Medicago truncatula]
           gi|358346047|ref|XP_003637084.1| Ring finger protein
           [Medicago truncatula] gi|355480721|gb|AES61924.1| Ring
           finger protein [Medicago truncatula]
           gi|355503019|gb|AES84222.1| Ring finger protein
           [Medicago truncatula] gi|388507518|gb|AFK41825.1|
           unknown [Medicago truncatula]
          Length = 156

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/112 (63%), Positives = 76/112 (67%)
 Frame = -3

Query: 503 NILAILTGIPSRPSRQDDDEIMEEGLRHRTDTSFEGYPKLLYSQVIHQHNKGEGEXXXXX 324
           NIL IL+G P  P R +D  IME+GLRH TDTSFEGYPKLLYSQ+  Q N          
Sbjct: 55  NILNILSGFP--PHRHEDS-IMEQGLRHHTDTSFEGYPKLLYSQI--QKNGSSTSISCSI 109

Query: 323 XXXXXXXXXXCLGDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKS 168
                      LGDYKESD LRLLP CGHLYH+ACVDPWL LHSTCPICRKS
Sbjct: 110 C----------LGDYKESDMLRLLPDCGHLYHVACVDPWLVLHSTCPICRKS 151


>gb|AFK46438.1| unknown [Lotus japonicus]
          Length = 163

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/115 (52%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
 Frame = -3

Query: 503 NILAILTGIPS-RPSRQDDDEIMEEGLR--HRTDTSFEGYPKLLYSQVIHQHNKGEGEXX 333
           NI  IL G P  R + +++ + ME+GLR  H  D SFE YPKLLYS+V+ + +       
Sbjct: 52  NIFNILAGFPPPRTAGEEESQDMEQGLRDDHNMDNSFESYPKLLYSEVVKKSDSSVSSCC 111

Query: 332 XXXXXXXXXXXXXCLGDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKS 168
                         LGDYKE+DTLR+LP CGH+YHLACVDPWL+ HSTCPICRKS
Sbjct: 112 SIC-----------LGDYKEADTLRMLPDCGHVYHLACVDPWLKFHSTCPICRKS 155


>gb|AFK47405.1| unknown [Lotus japonicus]
          Length = 163

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/115 (53%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
 Frame = -3

Query: 503 NILAILTGIPS-RPSRQDDDEIMEEGLR--HRTDTSFEGYPKLLYSQVIHQHNKGEGEXX 333
           NI  IL G P  R + +++ + ME+GLR  H  D SFE YPKLLYS+V  + +       
Sbjct: 52  NIFNILAGFPPPRTAGEEESQDMEQGLRDDHNMDNSFESYPKLLYSEVEKRSDSSVSSCC 111

Query: 332 XXXXXXXXXXXXXCLGDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKS 168
                         LGDYKE+DTLR+LP CGH+YHLACVDPWL+LHSTCPICRKS
Sbjct: 112 SIC-----------LGDYKEADTLRMLPDCGHVYHLACVDPWLKLHSTCPICRKS 155


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/104 (47%), Positives = 57/104 (54%)
 Frame = -3

Query: 476 PSRPSRQDDDEIMEEGLRHRTDTSFEGYPKLLYSQVIHQHNKGEGEXXXXXXXXXXXXXX 297
           P +   + D  +++ GL   T TS   YPKLLYS+   Q N                   
Sbjct: 63  PPQAVGEMDSVVVDIGLDQETITS---YPKLLYSEAKLQKNDSTASCCSIC--------- 110

Query: 296 XCLGDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKSP 165
             L DYK SD LRLLP CGHL+HL CVDPWLRLH TCP+CR SP
Sbjct: 111 --LADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSP 152


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 48/101 (47%), Positives = 56/101 (55%)
 Frame = -3

Query: 467 PSRQDDDEIMEEGLRHRTDTSFEGYPKLLYSQVIHQHNKGEGEXXXXXXXXXXXXXXXCL 288
           P  +  D ++E G+   T    + YPKLLYSQ    HN                    CL
Sbjct: 66  PDDRLQDIVVEVGIDEAT---LKNYPKLLYSQA-KLHNTDT----------TATCCSICL 111

Query: 287 GDYKESDTLRLLPGCGHLYHLACVDPWLRLHSTCPICRKSP 165
            DYK +D LRLLP CGHL+HL CVDPWLRLH TCP+CR SP
Sbjct: 112 ADYKSTDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSP 152


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