BLASTX nr result

ID: Glycyrrhiza24_contig00013645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013645
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...   107   1e-21
ref|XP_003617891.1| F-box/WD-40 repeat-containing protein [Medic...    84   1e-14
ref|XP_003617400.1| F-box protein [Medicago truncatula] gi|35551...    84   2e-14
ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|35547...    82   5e-14
ref|XP_003637809.1| F-box/kelch-repeat protein, partial [Medicag...    78   9e-13

>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/76 (65%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   HLFEDPCFMILYRNNFISNNHSDYDDTCLLLKQTLPGKVYHCVLHLFSGESFENRVKLDW 182
           HLFE+P F+ ++ NNFI  +HS YDDTCLLLKQT+PG  YHC L+L SGE+FEN+V L+W
Sbjct: 41  HLFENPNFISMFCNNFILKDHSFYDDTCLLLKQTVPGHYYHCALYLLSGENFENKVILNW 100

Query: 183 PPPFQ-DDRHIYILGS 227
           PPPFQ DD  + ILGS
Sbjct: 101 PPPFQADDIDMDILGS 116


>ref|XP_003617891.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|355519226|gb|AET00850.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 474

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 4/79 (5%)
 Frame = +3

Query: 6   LFEDPCFMILYRNNFISNNHSDYDDTCLLLKQTLPGKVYH---CVLHLFSGESFENRVKL 176
           LFE+P F+ +Y NN + N+HSDYDDT L+L + LP   YH   C  +L S E  ENRVKL
Sbjct: 48  LFENPNFIKMYCNNILCNDHSDYDDTFLILHK-LPFNYYHGQHCEFYLLSSERLENRVKL 106

Query: 177 DWPPPFQD-DRHIYILGSI 230
           DWPP FQ+ D +IY++G +
Sbjct: 107 DWPPQFQEIDTNIYVVGCV 125


>ref|XP_003617400.1| F-box protein [Medicago truncatula] gi|355518735|gb|AET00359.1|
           F-box protein [Medicago truncatula]
          Length = 419

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 6/81 (7%)
 Frame = +3

Query: 6   LFEDPCFMILYRNNFIS---NNHSDYDDTCLLLKQTLPGKVYH--CVLHLFSGESFENRV 170
           LF++  F+I+YRNN  S   NNH  YDDT L+L    P   YH  C  +L SGE F+N+V
Sbjct: 78  LFQNSYFIIMYRNNLTSTSSNNH--YDDTYLVLHGE-PTDEYHIPCEFYLLSGERFKNKV 134

Query: 171 KLDWPPPFQD-DRHIYILGSI 230
           K+DWPPPFQ+ DRHIYILGS+
Sbjct: 135 KIDWPPPFQENDRHIYILGSV 155


>ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|355477502|gb|AES58705.1|
           F-box protein [Medicago truncatula]
          Length = 403

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
 Frame = +3

Query: 6   LFEDPCFMILYRNNFISNNHSDYDDTCLLLKQTLP--GKVYHCVLHLFSGESFENRVKLD 179
           LFE+P FM +Y NNFISN+ S  DDTCLLL++ +       H V++L SGE FEN VK+D
Sbjct: 52  LFENPNFMNMYCNNFISNSPSYCDDTCLLLQEIISPNSTEEHSVMYLLSGERFENVVKID 111

Query: 180 WPPPF-QDDRHIYILGSI 230
            PPPF +DD  I+ILGS+
Sbjct: 112 LPPPFCKDDYDIHILGSV 129


>ref|XP_003637809.1| F-box/kelch-repeat protein, partial [Medicago truncatula]
           gi|355503744|gb|AES84947.1| F-box/kelch-repeat protein,
           partial [Medicago truncatula]
          Length = 209

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   HLFEDPCFMILYRNNFISNNHSDYDDTCLLLKQTLPGKVYHCVLHLFSGESFENRVKLDW 182
           HLFE+P F+ +YR  FIS+ + + D + LLL+QTLP      VL+L  GE FEN+VK DW
Sbjct: 46  HLFENPNFINMYRKYFISSTYEE-DGSSLLLQQTLPYLPNLHVLYLLFGERFENKVKFDW 104

Query: 183 PPPFQDDR-HIYILGSI 230
           PPPFQ+D   I+ILG +
Sbjct: 105 PPPFQEDNIAIHILGPV 121


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