BLASTX nr result

ID: Glycyrrhiza24_contig00013641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013641
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   345   e-126
ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   349   e-125
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   223   3e-74
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]   220   3e-73
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              208   1e-69

>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score =  345 bits (884), Expect(2) = e-126
 Identities = 184/254 (72%), Positives = 200/254 (78%)
 Frame = -2

Query: 764  FPAGCNSVMLVSSSKLSALKGLIAMLAVYHDDSAGRATTGDKIPDELIFTCIDNICQSFL 585
            F    N+VML+SSSKLSALK LIA+LAVYHDDS GRATTG++IP+ELIFTCIDNICQSFL
Sbjct: 1332 FVQDANAVMLLSSSKLSALKELIAVLAVYHDDSKGRATTGERIPNELIFTCIDNICQSFL 1391

Query: 584  ATVETLSPVLDASEDMLNFLACQVELLLLLTRTVCKTLSLYTSLLVLKCAXXXXXXXXXX 405
             T+  LSPVLDASEDMLN LACQVELLLL TRTV   LS+ TSLLV+KCA          
Sbjct: 1392 DTIVRLSPVLDASEDMLNILACQVELLLLFTRTVSNGLSIDTSLLVMKCASSGLKLLSEF 1451

Query: 404  XXXXSAANLIRKXXXXXXXXXLQSNSPNSHLSGATVEGSGDDFSKISNATLGLLPILCNC 225
                S ANLI K         LQSNS N H + A  EGSG+DFS++SNATLGLLPILCNC
Sbjct: 1452 KLLPSKANLIMKLLLTLLLLVLQSNSLNLHFNAAADEGSGNDFSRVSNATLGLLPILCNC 1511

Query: 224  TVTSEHCMLSLSVMDLILRSFLMPRTWLPVLQNHLQMQSVMLKLQDKNSSSIPIIMKFFL 45
              TSE CML+LSVMDLIL SFLMPRTWLP+LQNHL MQ VMLKLQDKNSSSIPIIMK FL
Sbjct: 1512 IATSELCMLTLSVMDLILGSFLMPRTWLPILQNHLHMQFVMLKLQDKNSSSIPIIMKLFL 1571

Query: 44   TLARVRGGAEMLYC 3
            T+AR RGGAEMLYC
Sbjct: 1572 TIARTRGGAEMLYC 1585



 Score =  134 bits (337), Expect(2) = e-126
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = -3

Query: 973  KIGIGPFKELSQYLVESNFLGAYQRQFNEDFFAKNVYLFDLIQLRADLRLDVWDCSDWRT 794
            K+GIGPFKELSQYLVES+FL +YQ QFNEDFFAKN+YLFDL QLRADL L  WDCSDWRT
Sbjct: 1262 KMGIGPFKELSQYLVESSFLASYQHQFNEDFFAKNMYLFDLKQLRADLNLGAWDCSDWRT 1321

Query: 793  SKEIAETMMRFLQDA 749
            SK+IAETM+RF+QDA
Sbjct: 1322 SKDIAETMLRFVQDA 1336


>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  349 bits (895), Expect(2) = e-125
 Identities = 188/254 (74%), Positives = 202/254 (79%)
 Frame = -2

Query: 764  FPAGCNSVMLVSSSKLSALKGLIAMLAVYHDDSAGRATTGDKIPDELIFTCIDNICQSFL 585
            F    NSVML+SSSKLSALKGLIA+LAV H DS GRATTG +I DELIF  +DNICQSFL
Sbjct: 1328 FLQDANSVMLLSSSKLSALKGLIAVLAVNHYDSQGRATTGGRISDELIFAFMDNICQSFL 1387

Query: 584  ATVETLSPVLDASEDMLNFLACQVELLLLLTRTVCKTLSLYTSLLVLKCAXXXXXXXXXX 405
            AT+ETLS VLDASED+LNFLACQ ELLL LTRTVCK+LSL+ SLLVLKCA          
Sbjct: 1388 ATIETLSSVLDASEDILNFLACQAELLLQLTRTVCKSLSLHVSLLVLKCASSGLKLLSAL 1447

Query: 404  XXXXSAANLIRKXXXXXXXXXLQSNSPNSHLSGATVEGSGDDFSKISNATLGLLPILCNC 225
                S ANLI K         LQS+S N+H  GAT E SG+DFSK+SNATLGLLPILCNC
Sbjct: 1448 KPLPSEANLIMKLLLTLLLSVLQSDSLNAHSDGATDESSGEDFSKVSNATLGLLPILCNC 1507

Query: 224  TVTSEHCMLSLSVMDLILRSFLMPRTWLPVLQNHLQMQSVMLKLQDKNSSSIPIIMKFFL 45
              TSEHCMLSLSVMDLILR FL PRTWLPVLQNHLQ+  VMLKL DKNS+SIPIIMKFFL
Sbjct: 1508 IATSEHCMLSLSVMDLILRRFLTPRTWLPVLQNHLQLPIVMLKLHDKNSASIPIIMKFFL 1567

Query: 44   TLARVRGGAEMLYC 3
            TLARVRGGAEMLYC
Sbjct: 1568 TLARVRGGAEMLYC 1581



 Score =  126 bits (317), Expect(2) = e-125
 Identities = 62/83 (74%), Positives = 67/83 (80%), Gaps = 5/83 (6%)
 Frame = -3

Query: 973  KIGIGPFKELSQYLVESNFLGAYQRQFNED-----FFAKNVYLFDLIQLRADLRLDVWDC 809
            KI IGPFKELSQYLVESNFLG YQ  FNED      F KNVYLFDL  LR DLRLD+WDC
Sbjct: 1253 KIDIGPFKELSQYLVESNFLGTYQHLFNEDSFTKNMFTKNVYLFDLAHLREDLRLDLWDC 1312

Query: 808  SDWRTSKEIAETMMRFLQDATQL 740
            S+W+TSKEIAETM+RFLQDA  +
Sbjct: 1313 SNWKTSKEIAETMLRFLQDANSV 1335


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  223 bits (569), Expect(2) = 3e-74
 Identities = 123/249 (49%), Positives = 169/249 (67%), Gaps = 2/249 (0%)
 Frame = -2

Query: 749  NSVMLVSSSKLSALKGLIAMLAVYHDDSAGRATT-GDKIPDELIFTCIDNICQSFLATVE 573
            NS++L++ SKL +LK LI +L +Y +D + R TT G  IP++LI +CID++CQ F  T+E
Sbjct: 1339 NSMVLLTGSKLCSLKALITILTMYEEDLSERKTTIGGAIPEQLILSCIDHVCQCFHGTLE 1398

Query: 572  TLSPVLDASEDMLNFLACQVELLLLLTRTVCKTLSLYTSLLVLKCAXXXXXXXXXXXXXX 393
            +L+PVLDA EDML+FLA Q ELLL L R V K+L L   +LVLK +              
Sbjct: 1399 SLAPVLDAPEDMLDFLAAQAELLLRLIRFVNKSLPLPVCVLVLKTSGHGLKVLGNFKPSV 1458

Query: 392  SAANLIRKXXXXXXXXXLQSNSPNSHLSGATVEGSGDDFSKISNATLGLLPILCNCTVTS 213
                   K         L+ +S +S L G + + S +D ++ S+ +LGLLPILCNC  T+
Sbjct: 1459 PEVRTTMKLLLMLLLSSLEFSSLSSLLGGLSDKKSVEDLAEASSVSLGLLPILCNCIGTA 1518

Query: 212  EHCMLSLSVMDLILRSFLMPRTWLPVLQNHLQMQSVMLKLQDKNS-SSIPIIMKFFLTLA 36
            E+C+LSL+ +DLIL+ FL P TW P++Q HLQ+Q ++LKLQDK+S +SIPII++F LTLA
Sbjct: 1519 ENCVLSLTTIDLILKGFLTPNTWFPIIQEHLQLQHIVLKLQDKSSLASIPIILRFLLTLA 1578

Query: 35   RVRGGAEML 9
            RVRGGAEML
Sbjct: 1579 RVRGGAEML 1587



 Score = 82.4 bits (202), Expect(2) = 3e-74
 Identities = 40/80 (50%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = -3

Query: 973  KIGIGPFKELSQYLVESNFLGAYQRQFNEDFFA--KNVYLFDLIQLRADLRLDVWDCSDW 800
            KI  GPFKEL+QYL++S FL  Y+ +++ D FA  K+V+LFD   L+ADL L +WD S W
Sbjct: 1262 KIDPGPFKELAQYLLDSQFLQNYRHEYDGDLFAPAKDVHLFDTSHLQADLGLAMWDHSQW 1321

Query: 799  RTSKEIAETMMRFLQDATQL 740
            + +KEIAETM+  +++A  +
Sbjct: 1322 KATKEIAETMLLCMKEANSM 1341


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score =  220 bits (561), Expect(2) = 3e-73
 Identities = 122/253 (48%), Positives = 168/253 (66%), Gaps = 6/253 (2%)
 Frame = -2

Query: 749  NSVMLVSSSKLSALKGLIAMLAVYHDD-----SAGRATTGDKIPDELIFTCIDNICQSFL 585
            NS++L++ SKL +LK LI +L +Y +D     S  + T G  IP++LI +CID++CQ F 
Sbjct: 743  NSMVLLTGSKLCSLKALITILTMYEEDVLVQLSERKTTIGGAIPEQLILSCIDHVCQCFH 802

Query: 584  ATVETLSPVLDASEDMLNFLACQVELLLLLTRTVCKTLSLYTSLLVLKCAXXXXXXXXXX 405
             T+E+L+PVLDA EDML+FLA Q ELLL L R V K+L L   +LVLK +          
Sbjct: 803  GTLESLAPVLDAPEDMLDFLAAQAELLLRLIRFVNKSLPLPVCVLVLKTSGHGLKVLGNF 862

Query: 404  XXXXSAANLIRKXXXXXXXXXLQSNSPNSHLSGATVEGSGDDFSKISNATLGLLPILCNC 225
                       K         L+ +S +S L G + + S +D ++ S+ +LGLLPILCNC
Sbjct: 863  KPSVPEVRTTMKLLLMLLLSSLEFSSLSSLLGGLSDKKSVEDLAEASSVSLGLLPILCNC 922

Query: 224  TVTSEHCMLSLSVMDLILRSFLMPRTWLPVLQNHLQMQSVMLKLQDKNS-SSIPIIMKFF 48
              T+E+C+LSL+ +DLIL+ FL P TW P++Q HLQ+Q ++LKLQDK+S +SIPII++F 
Sbjct: 923  IGTAENCVLSLTTIDLILKGFLTPNTWFPIIQEHLQLQHIVLKLQDKSSLASIPIILRFL 982

Query: 47   LTLARVRGGAEML 9
            LTLARVRGGAEML
Sbjct: 983  LTLARVRGGAEML 995



 Score = 82.4 bits (202), Expect(2) = 3e-73
 Identities = 40/80 (50%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = -3

Query: 973 KIGIGPFKELSQYLVESNFLGAYQRQFNEDFFA--KNVYLFDLIQLRADLRLDVWDCSDW 800
           KI  GPFKEL+QYL++S FL  Y+ +++ D FA  K+V+LFD   L+ADL L +WD S W
Sbjct: 666 KIDPGPFKELAQYLLDSQFLQNYRHEYDGDLFAPAKDVHLFDTSHLQADLGLAMWDHSQW 725

Query: 799 RTSKEIAETMMRFLQDATQL 740
           + +KEIAETM+  +++A  +
Sbjct: 726 KATKEIAETMLLCMKEANSM 745


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  208 bits (530), Expect(2) = 1e-69
 Identities = 115/241 (47%), Positives = 161/241 (66%), Gaps = 2/241 (0%)
 Frame = -2

Query: 749  NSVMLVSSSKLSALKGLIAMLAVYHDDSAGRATT-GDKIPDELIFTCIDNICQSFLATVE 573
            NS++L++ SKL +LK LI +L +Y +D + R TT G  IP++LI +CID++CQ F  T+E
Sbjct: 1362 NSMVLLTGSKLCSLKALITILTMYEEDLSERKTTIGGAIPEQLILSCIDHVCQCFHGTLE 1421

Query: 572  TLSPVLDASEDMLNFLACQVELLLLLTRTVCKTLSLYTSLLVLKCAXXXXXXXXXXXXXX 393
            +L+PVLDA EDML+FLA Q ELLL L R V K+L L   +LVLK +              
Sbjct: 1422 SLAPVLDAPEDMLDFLAAQAELLLRLIRFVNKSLPLPVCVLVLKTSGHGLKVLGNFKPSV 1481

Query: 392  SAANLIRKXXXXXXXXXLQSNSPNSHLSGATVEGSGDDFSKISNATLGLLPILCNCTVTS 213
                   K         L+ +S +S L G + + S +D ++ S+ +LGLLPILCNC  T+
Sbjct: 1482 PEVRTTMKLLLMLLLSSLEFSSLSSLLGGLSDKKSVEDLAEASSVSLGLLPILCNCIGTA 1541

Query: 212  EHCMLSLSVMDLILRSFLMPRTWLPVLQNHLQMQSVMLKLQDKNS-SSIPIIMKFFLTLA 36
            E+C+LSL+ +DLIL+ FL P TW P++Q HLQ+Q ++LKLQDK+S +SIPII++F LTLA
Sbjct: 1542 ENCVLSLTTIDLILKGFLTPNTWFPIIQEHLQLQHIVLKLQDKSSLASIPIILRFLLTLA 1601

Query: 35   R 33
            R
Sbjct: 1602 R 1602



 Score = 82.4 bits (202), Expect(2) = 1e-69
 Identities = 40/80 (50%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = -3

Query: 973  KIGIGPFKELSQYLVESNFLGAYQRQFNEDFFA--KNVYLFDLIQLRADLRLDVWDCSDW 800
            KI  GPFKEL+QYL++S FL  Y+ +++ D FA  K+V+LFD   L+ADL L +WD S W
Sbjct: 1285 KIDPGPFKELAQYLLDSQFLQNYRHEYDGDLFAPAKDVHLFDTSHLQADLGLAMWDHSQW 1344

Query: 799  RTSKEIAETMMRFLQDATQL 740
            + +KEIAETM+  +++A  +
Sbjct: 1345 KATKEIAETMLLCMKEANSM 1364


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