BLASTX nr result

ID: Glycyrrhiza24_contig00013639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013639
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235956.1| uncharacterized protein LOC100526917 [Glycin...   205   5e-51
ref|XP_003593218.1| Methyl binding domain protein [Medicago trun...   177   1e-42
ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260...   152   5e-35
emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]   152   5e-35
ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|2...   115   6e-24

>ref|NP_001235956.1| uncharacterized protein LOC100526917 [Glycine max]
           gi|255631145|gb|ACU15938.1| unknown [Glycine max]
          Length = 169

 Score =  205 bits (522), Expect = 5e-51
 Identities = 107/137 (78%), Positives = 112/137 (81%), Gaps = 3/137 (2%)
 Frame = -3

Query: 617 AFSSDKGGKQFCSVDHERENVKGVQELRLDEIGALEYDFASAQGSL--DVPTELANNTVV 444
           AFSSDKG +QFCSVDHE +NVKG QELR DEI   E DFA  Q S   DVPTEL NNTVV
Sbjct: 31  AFSSDKGEEQFCSVDHEHDNVKGFQELRFDEIDTAECDFARVQVSPLPDVPTELTNNTVV 90

Query: 443 ERTHASSVQFESQEVMLNVDNRNQLTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAK 264
           E T AS VQFESQ VMLN+  RNQLTTVCVWCGIEFNH+AVNSEIQ DSV FMCPACKAK
Sbjct: 91  EGTCASPVQFESQVVMLNIGGRNQLTTVCVWCGIEFNHDAVNSEIQPDSVRFMCPACKAK 150

Query: 263 ISGQINV-LDSGSPNAG 216
           ISGQ+NV LD GSPNAG
Sbjct: 151 ISGQVNVLLDCGSPNAG 167


>ref|XP_003593218.1| Methyl binding domain protein [Medicago truncatula]
            gi|355482266|gb|AES63469.1| Methyl binding domain protein
            [Medicago truncatula]
          Length = 805

 Score =  177 bits (450), Expect = 1e-42
 Identities = 87/112 (77%), Positives = 95/112 (84%)
 Frame = -3

Query: 554  KGVQELRLDEIGALEYDFASAQGSLDVPTELANNTVVERTHASSVQFESQEVMLNVDNRN 375
            KG  ELRL++IG+LEYDFAS  GSLDV TELAN+ VV+ T  SS    SQEVMLN+D +N
Sbjct: 692  KGFPELRLEDIGSLEYDFASVPGSLDVSTELANDIVVQGTCTSSAHSASQEVMLNMDYKN 751

Query: 374  QLTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKISGQINVLDSGSPNA 219
            QLTT CVWCGIEFNH+AVNSEIQ DSVGFMCP CKAKISGQINVLDSGSPNA
Sbjct: 752  QLTTTCVWCGIEFNHDAVNSEIQSDSVGFMCPVCKAKISGQINVLDSGSPNA 803


>ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260704 [Vitis vinifera]
          Length = 403

 Score =  152 bits (384), Expect = 5e-35
 Identities = 74/136 (54%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
 Frame = -3

Query: 608 SDKGGKQFCSVDHERENVKGVQELRLDEIGALEYDFASAQGSLDVPTE---LANNTVVER 438
           SDKG  +FC VD + +N  G +EL+LDEI +L++ F + QG L +P     L N   +E 
Sbjct: 267 SDKGEDEFCCVDQKLQNTTGFEELKLDEIESLKFGFVTEQGPLSLPEVHMGLENGATMED 326

Query: 437 THASSVQFESQEVMLNVDNRNQLTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKIS 258
              SS+ FE +EVML++  R+QLTT CVWC +EF+HEAV SE+Q DSVGFMCP CK+KIS
Sbjct: 327 GFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEAVESEMQSDSVGFMCPTCKSKIS 386

Query: 257 GQINVLDSGSPNAGHH 210
           GQ+NVLDSG     HH
Sbjct: 387 GQLNVLDSGLSMNPHH 402


>emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]
          Length = 849

 Score =  152 bits (384), Expect = 5e-35
 Identities = 74/136 (54%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
 Frame = -3

Query: 608  SDKGGKQFCSVDHERENVKGVQELRLDEIGALEYDFASAQGSLDVPTE---LANNTVVER 438
            SDKG  +FC VD + +N  G +EL+LDEI +L++ F + QG L +P     L N   +E 
Sbjct: 713  SDKGEDEFCCVDQKLQNTTGFEELKLDEIESLKFGFVTEQGPLSLPEVHMGLENGATMED 772

Query: 437  THASSVQFESQEVMLNVDNRNQLTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKIS 258
               SS+ FE +EVML++  R+QLTT CVWC +EF+HEAV SE+Q DSVGFMCP CK+KIS
Sbjct: 773  GFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEAVESEMQSDSVGFMCPTCKSKIS 832

Query: 257  GQINVLDSGSPNAGHH 210
            GQ+NVLDSG     HH
Sbjct: 833  GQLNVLDSGLSMNPHH 848


>ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|222847441|gb|EEE84988.1|
            predicted protein [Populus trichocarpa]
          Length = 837

 Score =  115 bits (288), Expect = 6e-24
 Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
 Frame = -3

Query: 605  DKGGKQFCSVDHERENVKGVQELRLDEIGALEYDFASAQGSL---DVPTELANNTVVERT 435
            DKG  +F + D     V G  EL+LDEI  L++   + Q  +   +VP  L N T +E  
Sbjct: 716  DKGENEFGTADQIHAKVTGFDELKLDEIEHLKFSLGTGQEPMSLHEVPLGLGNITEMEAA 775

Query: 434  HASSVQFESQEVMLNVDNRNQLTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKISG 255
            + +S+QFES  ++   D   QLTTVCVWCG EF+HEA ++E+Q  SVG+MCP CKAKISG
Sbjct: 776  YDASLQFESDVIVDTADR--QLTTVCVWCGAEFSHEAFDTEMQSGSVGYMCPDCKAKISG 833

Query: 254  QINV 243
            Q+N+
Sbjct: 834  QLNI 837


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