BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013635
         (1816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ...   801   0.0  
ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containi...   781   0.0  
ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi...   780   0.0  
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   718   0.0  
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   716   0.0  

>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355510921|gb|AES92063.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  801 bits (2070), Expect = 0.0
 Identities = 407/501 (81%), Positives = 437/501 (87%), Gaps = 2/501 (0%)
 Frame = -1

Query: 1768 MDMASISLTFSNS-IVPSPIPQDKCKKTHNPRSQD-PIFRVTRYAVSAPASKTASSDSSP 1595
            MDMAS+SLTFS+S IVPSPIPQ      +NPR    PIF    YAVS+  SKTAS+ +S 
Sbjct: 1    MDMASVSLTFSSSSIVPSPIPQHNKTTHNNPRKPHLPIF----YAVSSSPSKTASASNSS 56

Query: 1594 VVKKRHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXAWANTVTEALSERIDK 1415
            VVKK+HWKQGEFPGVSETSLP STRR+ PI              AWANTVTEALSE IDK
Sbjct: 57   VVKKKHWKQGEFPGVSETSLPSSTRRK-PIKNVKKKLDRKNNAKAWANTVTEALSECIDK 115

Query: 1414 KQWLQALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCDPTPEL 1235
            KQWLQALE  DMLREQSFYQP+EGTYMKLIVLLGKSGQP RA QLFT MIEEGCDPTPEL
Sbjct: 116  KQWLQALETLDMLREQSFYQPREGTYMKLIVLLGKSGQPQRAHQLFTAMIEEGCDPTPEL 175

Query: 1234 YTALIAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVESLYEEM 1055
            YTAL+AAYCRSN+IDEA  ILDEMKNHPLCQPDVFTYSTLIKACVD FKFEL+E LYEEM
Sbjct: 176  YTALLAAYCRSNMIDEALSILDEMKNHPLCQPDVFTYSTLIKACVDIFKFELIELLYEEM 235

Query: 1054 AQRSIAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVFGNMGQ 875
            AQRSI PNTVTQNIVL+GYGKAG F+QMEKVLS MLQS +CKPDVWTMNTII VFGNMGQ
Sbjct: 236  AQRSIMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKPDVWTMNTIIGVFGNMGQ 295

Query: 874  IDMMERWYEKFRNFGIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTTSTYNN 695
            IDMME+WYEKFRNFGIEPETRTFNILIG+YGK+RMYDKMSSVMEYMRKLQFPWTTSTYNN
Sbjct: 296  IDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 355

Query: 694  VIEAFADAGDAKHMEYTFDQMRAEGMKADTKTFYCLVNGFANAGLFHKVISSVRLATRLE 515
            VIEAFA+AGDAK+MEYTF+QMR+EGM+ADTKTF CL+ GFANAGLFHKVISSV+LA +LE
Sbjct: 356  VIEAFAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANAGLFHKVISSVQLAAKLE 415

Query: 514  IPENTVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGMNDKIY 335
            IP NT FYNAVLSACAKAEDLMEM+RVF RMKD QC  DDTTY IMVEAYRKEGMNDKIY
Sbjct: 416  IPLNTAFYNAVLSACAKAEDLMEMDRVFMRMKDTQCPLDDTTYSIMVEAYRKEGMNDKIY 475

Query: 334  YLEQEKQKIITDHKEVSQPED 272
            YLEQEKQ +ITD+K  +QP D
Sbjct: 476  YLEQEKQTMITDNKIENQPVD 496


>ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Glycine max]
          Length = 488

 Score =  781 bits (2016), Expect = 0.0
 Identities = 389/498 (78%), Positives = 425/498 (85%)
 Frame = -1

Query: 1762 MASISLTFSNSIVPSPIPQDKCKKTHNPRSQDPIFRVTRYAVSAPASKTASSDSSPVVKK 1583
            MASISL+F +SIVPS IP DK  KTH+    +P F + R+ +SAPA           VKK
Sbjct: 1    MASISLSFCSSIVPSRIPHDKSNKTHS--HHNPTFPLIRFGISAPA-----------VKK 47

Query: 1582 RHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXAWANTVTEALSERIDKKQWL 1403
            RHWK+GEFP  S+ S P  TRR++P+              AW NTVTE+LSERI  K WL
Sbjct: 48   RHWKKGEFPATSQPSFPNDTRRKTPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWL 107

Query: 1402 QALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCDPTPELYTAL 1223
            QAL++FDMLREQ+FYQPKEGT MKLIVLLGKSGQPHRA QLFTTMIEEG +PTPELYTAL
Sbjct: 108  QALQVFDMLREQTFYQPKEGTCMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTAL 167

Query: 1222 IAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVESLYEEMAQRS 1043
            +AAYCRSN+IDEAF +L+EMK  PLCQPDVFTYSTLIK CVDAFKF+LV+ LYEEMA+RS
Sbjct: 168  LAAYCRSNMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKVCVDAFKFDLVQLLYEEMAERS 227

Query: 1042 IAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVFGNMGQIDMM 863
            I PNTVTQNIVL GYGKAG F+QMEKVLSSMLQST CKPDVWTMNTIISVFGNMGQIDM 
Sbjct: 228  ITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKPDVWTMNTIISVFGNMGQIDMT 287

Query: 862  ERWYEKFRNFGIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 683
            E+WYEKFR FGIEPETRTFNILIGAYGK+RMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA
Sbjct: 288  EKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 347

Query: 682  FADAGDAKHMEYTFDQMRAEGMKADTKTFYCLVNGFANAGLFHKVISSVRLATRLEIPEN 503
            FADAGDAKHME TFDQMRAEGMKADTKT  CL+NG+ANAGLFHKVISSVRLA +LEIPEN
Sbjct: 348  FADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPEN 407

Query: 502  TVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGMNDKIYYLEQ 323
              FYNAVLSACAKAEDLMEMERVFKRMKD+QCQPDDTTY IM+EAYRKEGMNDKIYYLEQ
Sbjct: 408  ITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKIYYLEQ 467

Query: 322  EKQKIITDHKEVSQPEDE 269
            EKQ ++TD K+ SQ E+E
Sbjct: 468  EKQTMMTDDKKASQFENE 485


>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic-like [Glycine max]
          Length = 488

 Score =  780 bits (2015), Expect = 0.0
 Identities = 389/498 (78%), Positives = 424/498 (85%)
 Frame = -1

Query: 1762 MASISLTFSNSIVPSPIPQDKCKKTHNPRSQDPIFRVTRYAVSAPASKTASSDSSPVVKK 1583
            MAS+SL+F + IVPS IP DK  KTH+     P F + R+ +SAPA           VKK
Sbjct: 1    MASMSLSFCSCIVPSRIPHDKSNKTHS--HHQPTFPLIRFGISAPA-----------VKK 47

Query: 1582 RHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXAWANTVTEALSERIDKKQWL 1403
            RHWK+GEFP  S+ S P  TRR++P+              AW NTVTE+LSERI  K WL
Sbjct: 48   RHWKKGEFPATSQPSFPNDTRRKTPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWL 107

Query: 1402 QALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCDPTPELYTAL 1223
            QAL++FDMLREQ+FYQPKEGTYMKLIVLLGKSGQPHRA QLFTTMIEEG +PTPELYTAL
Sbjct: 108  QALQVFDMLREQTFYQPKEGTYMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTAL 167

Query: 1222 IAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVESLYEEMAQRS 1043
            +AAYCRSN+IDEAF +L+EMK  P CQPDVFTYSTLIK CVDAFKF+LVE LYEEMA+RS
Sbjct: 168  LAAYCRSNMIDEAFSVLNEMKKLPRCQPDVFTYSTLIKVCVDAFKFDLVELLYEEMAERS 227

Query: 1042 IAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVFGNMGQIDMM 863
            I PNTVTQNIVL GYGKAG F+QMEKVLSSML ST CKPDVWTMNTIISVFGNMGQIDMM
Sbjct: 228  IMPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKPDVWTMNTIISVFGNMGQIDMM 287

Query: 862  ERWYEKFRNFGIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 683
            E+WYEKFR FGIEPETRTFNILIGAYGK+RMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA
Sbjct: 288  EKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 347

Query: 682  FADAGDAKHMEYTFDQMRAEGMKADTKTFYCLVNGFANAGLFHKVISSVRLATRLEIPEN 503
            FADAGDAKHME TFDQMRAEGMKADTKT  CL+NG+ANAGLFHKVISSVRLA +LEIPEN
Sbjct: 348  FADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPEN 407

Query: 502  TVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGMNDKIYYLEQ 323
              FYNAVLSACAKAEDLMEMERVFKRMKD+QCQPDDTTY IM+EAYRKEGMNDKIYYLEQ
Sbjct: 408  ITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKIYYLEQ 467

Query: 322  EKQKIITDHKEVSQPEDE 269
            EKQ ++TD K+VSQ E+E
Sbjct: 468  EKQTMMTDDKKVSQFENE 485


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
            chloroplastic [Vitis vinifera]
          Length = 498

 Score =  718 bits (1854), Expect = 0.0
 Identities = 363/497 (73%), Positives = 417/497 (83%), Gaps = 9/497 (1%)
 Frame = -1

Query: 1762 MASISLTFSNSIVPSPIPQDKCKKTHNPRSQD---PIFRVTRYAVSAPASK------TAS 1610
            MASISL+FS+S++PSP+ QDK K T   + +D    +  V R A ++PA +      ++S
Sbjct: 1    MASISLSFSSSLLPSPLLQDKNKATSATKPRDHHGSLCGVVRCAFASPARRKTSSTPSSS 60

Query: 1609 SDSSPVVKKRHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXAWANTVTEALS 1430
            S SS V KKR WKQGEFPG   TS  G +R+ +PI              AWANTV EALS
Sbjct: 61   SSSSAVGKKRLWKQGEFPG---TSAEGRSRK-TPIKNIKKKLDRKNDAKAWANTVAEALS 116

Query: 1429 ERIDKKQWLQALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCD 1250
            + + KKQWLQALE+F+MLREQ FYQPKEGTYMKL+VLLGKSGQP RA +LF TM+EEGC+
Sbjct: 117  DLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCE 176

Query: 1249 PTPELYTALIAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVES 1070
            PT ELYTAL+A+YCRSNLIDEAF IL++MK  P CQPDVFTYSTL+KACVDA +FELVES
Sbjct: 177  PTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVES 236

Query: 1069 LYEEMAQRSIAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVF 890
            LYEEM  RSI PNTVTQNIVLSGYGKAGKF++MEKVLS ML+ST+ KPDVWTMNTI+S+F
Sbjct: 237  LYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLF 296

Query: 889  GNMGQIDMMERWYEKFRNFGIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTT 710
            GN GQI++ME+WYEKFRNFGIEPETRTFNILIGAYGK+RMYDKMSSVMEYMRKLQFPWTT
Sbjct: 297  GNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTT 356

Query: 709  STYNNVIEAFADAGDAKHMEYTFDQMRAEGMKADTKTFYCLVNGFANAGLFHKVISSVRL 530
            STYNNVIEAF+D GDAK+MEYTFDQMRAEGMKADTKTF CL+ G+ANAGLFHKV+SSV+L
Sbjct: 357  STYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQL 416

Query: 529  ATRLEIPENTVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGM 350
            A + EIPENT FYNAV+SACAKAEDL+EMERVF RMKD  CQPD TTY IMVEAY+KEGM
Sbjct: 417  AGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGM 476

Query: 349  NDKIYYLEQEKQKIITD 299
            NDKIY LEQE+Q+++ D
Sbjct: 477  NDKIYDLEQERQRMVAD 493


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  716 bits (1847), Expect = 0.0
 Identities = 362/498 (72%), Positives = 417/498 (83%), Gaps = 9/498 (1%)
 Frame = -1

Query: 1762 MASISLTFSNSIVPSPIPQDKCKKTHNPRSQD---PIFRVTRYAVSAPASK------TAS 1610
            MASISL+FS+S++PSP+ QDK K T   + +D    +  V R A ++PA +      ++S
Sbjct: 1    MASISLSFSSSLLPSPLLQDKNKATSATKPRDHHGSLCGVVRCAFASPARRKTSSTPSSS 60

Query: 1609 SDSSPVVKKRHWKQGEFPGVSETSLPGSTRRRSPIXXXXXXXXXXXXXXAWANTVTEALS 1430
            S SS V KKR WKQGEFPG   TS  G +R+ +PI              AWANTV EALS
Sbjct: 61   SSSSAVGKKRLWKQGEFPG---TSAEGRSRK-TPIKNIKKKLDRKNDAKAWANTVAEALS 116

Query: 1429 ERIDKKQWLQALEIFDMLREQSFYQPKEGTYMKLIVLLGKSGQPHRASQLFTTMIEEGCD 1250
            + + KKQWLQALE+F+MLREQ FYQPKEGTYMKL+VLLGKSGQP RA +LF TM+EEGC+
Sbjct: 117  DLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCE 176

Query: 1249 PTPELYTALIAAYCRSNLIDEAFLILDEMKNHPLCQPDVFTYSTLIKACVDAFKFELVES 1070
            PT ELYTAL+A+YCRSNLIDEAF IL++MK  P CQPDVFTYSTL+KACVDA +FELVES
Sbjct: 177  PTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVES 236

Query: 1069 LYEEMAQRSIAPNTVTQNIVLSGYGKAGKFEQMEKVLSSMLQSTNCKPDVWTMNTIISVF 890
            LYEEM  RSI PNTVTQNIVLSGYGKAGKF++MEKVLS ML+ST+ KPDVWTMNTI+S+F
Sbjct: 237  LYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLF 296

Query: 889  GNMGQIDMMERWYEKFRNFGIEPETRTFNILIGAYGKRRMYDKMSSVMEYMRKLQFPWTT 710
            GN GQI++ME+WYEKFRNFGIEPETRTFNILIGAYGK+RMYDKMSSVMEYMRKLQFPWTT
Sbjct: 297  GNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTT 356

Query: 709  STYNNVIEAFADAGDAKHMEYTFDQMRAEGMKADTKTFYCLVNGFANAGLFHKVISSVRL 530
            STYNNVIEAF+D GDAK+MEYTFDQMRAEGMKADTKTF CL+ G+ANAGLFHKV+SSV+L
Sbjct: 357  STYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQL 416

Query: 529  ATRLEIPENTVFYNAVLSACAKAEDLMEMERVFKRMKDNQCQPDDTTYWIMVEAYRKEGM 350
            A + EIPENT FYNAV+SACAKAEDL+EMERVF RMKD  CQPD TTY IMVEAY+KEGM
Sbjct: 417  AGKFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGM 476

Query: 349  NDKIYYLEQEKQKIITDH 296
            NDKIY LEQE+Q+++  +
Sbjct: 477  NDKIYDLEQERQRMMCSY 494