BLASTX nr result

ID: Glycyrrhiza24_contig00013634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013634
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235648.1| uncharacterized protein LOC100306480 [Glycin...   249   8e-64
gb|AFK42947.1| unknown [Lotus japonicus]                              245   8e-63
gb|ACJ84283.1| unknown [Medicago truncatula] gi|388519049|gb|AFK...   240   4e-61
ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II tra...   213   4e-53
ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II tra...   211   2e-52

>ref|NP_001235648.1| uncharacterized protein LOC100306480 [Glycine max]
           gi|255628677|gb|ACU14683.1| unknown [Glycine max]
          Length = 139

 Score =  249 bits (635), Expect = 8e-64
 Identities = 125/137 (91%), Positives = 132/137 (96%)
 Frame = -1

Query: 698 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAHPTEEGANFSEQPKLMS 519
           MDIISQLQEQVNL+AHLA NT+GTLQRDAPPNRLSPNYPEPPAH TE+G+NFSEQPKLMS
Sbjct: 1   MDIISQLQEQVNLIAHLAFNTVGTLQRDAPPNRLSPNYPEPPAHATEDGSNFSEQPKLMS 60

Query: 518 TTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAEKELNQVQ 339
           TTLVKAAKQFDALVAALPISE+ EEAQLKRI+ELQAENDAIG ELQKQLEAAEKELNQVQ
Sbjct: 61  TTLVKAAKQFDALVAALPISESGEEAQLKRISELQAENDAIGLELQKQLEAAEKELNQVQ 120

Query: 338 ELFKQASDNCLNLKKAD 288
           ELF+QASDNCLNLKK D
Sbjct: 121 ELFRQASDNCLNLKKPD 137


>gb|AFK42947.1| unknown [Lotus japonicus]
          Length = 139

 Score =  245 bits (626), Expect = 8e-63
 Identities = 125/139 (89%), Positives = 131/139 (94%)
 Frame = -1

Query: 698 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAHPTEEGANFSEQPKLMS 519
           MDIISQLQEQVNL+A+LA NTIGTLQRDAPPNR+SPNYPEPPA PTE+GA FSEQPKLMS
Sbjct: 1   MDIISQLQEQVNLIANLAFNTIGTLQRDAPPNRISPNYPEPPAQPTEDGATFSEQPKLMS 60

Query: 518 TTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAEKELNQVQ 339
           T LVKAAKQFDALVAALPI+E  EEAQLKRIAELQAENDAIGQELQKQLEAAEKEL+QVQ
Sbjct: 61  TGLVKAAKQFDALVAALPIAEGGEEAQLKRIAELQAENDAIGQELQKQLEAAEKELHQVQ 120

Query: 338 ELFKQASDNCLNLKKADVN 282
           ELF QASDNCLNLKK DVN
Sbjct: 121 ELFSQASDNCLNLKKPDVN 139


>gb|ACJ84283.1| unknown [Medicago truncatula] gi|388519049|gb|AFK47586.1| unknown
           [Medicago truncatula]
          Length = 139

 Score =  240 bits (612), Expect = 4e-61
 Identities = 119/139 (85%), Positives = 130/139 (93%)
 Frame = -1

Query: 698 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAHPTEEGANFSEQPKLMS 519
           MDIISQLQEQVNL+A+LALNT+GTLQR APPNRLSPNYPEPP HPTE+GANFSE+PKLM 
Sbjct: 1   MDIISQLQEQVNLIANLALNTVGTLQRGAPPNRLSPNYPEPPPHPTEDGANFSEEPKLMG 60

Query: 518 TTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAEKELNQVQ 339
            +LVKAAKQFD LVA+LPISE   EAQLKRIAELQAENDA+GQELQKQLEAAEKELNQVQ
Sbjct: 61  ASLVKAAKQFDLLVASLPISETGGEAQLKRIAELQAENDAVGQELQKQLEAAEKELNQVQ 120

Query: 338 ELFKQASDNCLNLKKADVN 282
           EL++QA+DNCLNLKK DVN
Sbjct: 121 ELYRQATDNCLNLKKPDVN 139


>ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  213 bits (543), Expect = 4e-53
 Identities = 110/138 (79%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
 Frame = -1

Query: 698 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAH-PTEEGANFSEQPKLM 522
           MDIISQLQEQVN +A LA NT GTLQRDAPP RLSPNYPEPP+  PTE+ A  +EQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 521 STTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAEKELNQV 342
           S  LVKAAKQFDALVAALP+S+  EE QLKRIAELQAEND +GQELQKQL+AAEKEL QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 341 QELFKQASDNCLNLKKAD 288
           QELF Q +DNCLNLKKAD
Sbjct: 121 QELFSQVADNCLNLKKAD 138


>ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  211 bits (537), Expect = 2e-52
 Identities = 109/138 (78%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
 Frame = -1

Query: 698 MDIISQLQEQVNLVAHLALNTIGTLQRDAPPNRLSPNYPEPPAH-PTEEGANFSEQPKLM 522
           MDIISQLQEQVN +A LA NT GTLQRDAPP RLSPNYPEPP+  PTE+ A  +EQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 521 STTLVKAAKQFDALVAALPISEADEEAQLKRIAELQAENDAIGQELQKQLEAAEKELNQV 342
           S  LVKAAKQFDALVAALP+S+  EE QLKRIAELQAEND +GQELQKQL+AAEKEL QV
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 341 QELFKQASDNCLNLKKAD 288
           QELF Q +DNCLNL KAD
Sbjct: 121 QELFSQVADNCLNLMKAD 138


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