BLASTX nr result

ID: Glycyrrhiza24_contig00013630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013630
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...    79   9e-15
ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp....    55   1e-08
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    62   5e-08

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
           gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
           [Medicago truncatula]
          Length = 1116

 Score = 79.3 bits (194), Expect(2) = 9e-15
 Identities = 45/83 (54%), Positives = 47/83 (56%)
 Frame = -2

Query: 249 FVSEPFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVVTRKRRPKTGLY*TSEKTFYLVKQ 70
           F S  FWRGVLNPLRTTPPGGSPECRVFLRRQLDVV+T KR   T    +          
Sbjct: 706 FRSRLFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVLTCKRSKATSKGLSC--------- 756

Query: 69  QARD*AARNFIYLRRFAHPFSCS 1
                          FAHPFSCS
Sbjct: 757 --------------AFAHPFSCS 765



 Score = 25.4 bits (54), Expect(2) = 9e-15
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 269 VRHAPFSLFRSR 234
           +RHAPF LFRSR
Sbjct: 698 LRHAPFCLFRSR 709


>ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp. mays]
           gi|40795104|gb|AAR91148.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 111

 Score = 55.5 bits (132), Expect(2) = 1e-08
 Identities = 27/37 (72%), Positives = 30/37 (81%), Gaps = 3/37 (8%)
 Frame = +3

Query: 213 GLVRPAKT---APKQTKRCMPHSRGTASEILEEGGDD 314
           G+VR   +   APKQ KRC+PHSRGTASEILEEGGDD
Sbjct: 28  GVVRSGNSTRPAPKQRKRCVPHSRGTASEILEEGGDD 64



 Score = 28.9 bits (63), Expect(2) = 1e-08
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 182 GEPPGGVVRSGFST 223
           G+PPGGVVRSG ST
Sbjct: 23  GQPPGGVVRSGNST 36


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +3

Query: 225 PAKTAPKQTKRCMPHSRGTASEILEEGGDD 314
           P +TAPKQTKRCMPHSRGTAS+ILEEGGDD
Sbjct: 391 PKQTAPKQTKRCMPHSRGTASDILEEGGDD 420


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