BLASTX nr result

ID: Glycyrrhiza24_contig00013627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013627
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34661.1| unknown [Lotus japonicus]                              164   5e-39
ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyra...   142   4e-32
ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis tha...   141   5e-32
gb|AAM63145.1| unknown [Arabidopsis thaliana]                         141   5e-32

>gb|AFK34661.1| unknown [Lotus japonicus]
          Length = 188

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/123 (64%), Positives = 88/123 (71%)
 Frame = -2

Query: 369 HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLGQLRHDPEVAHLLSNIKKYN 190
           HWFCANCIM+VW H S +QPCKCPLCRRPITLLVPT+      R +PEVAH+LS I+ YN
Sbjct: 29  HWFCANCIMLVWNHGSAIQPCKCPLCRRPITLLVPTEQDSASHRQEPEVAHVLSQIQTYN 88

Query: 189 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXDPHRSLPLVIRARVFIAMILSAVYVFSPIDI 10
           R FGA SSG                    DP RSLPLVIRARV+IAMI+SA+YVFSPIDI
Sbjct: 89  RFFGARSSGPLQRMLDLPFLLRRLAREFLDPQRSLPLVIRARVYIAMIISAIYVFSPIDI 148

Query: 9   IPE 1
           IPE
Sbjct: 149 IPE 151


>ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|222862841|gb|EEF00348.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/123 (56%), Positives = 85/123 (69%)
 Frame = -2

Query: 369 HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLGQLRHDPEVAHLLSNIKKYN 190
           HWFC +CIM+VW H S +QPCKCPLCRR ITLLVP + SL + R DP+VA +L  I++YN
Sbjct: 27  HWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLVPGEASLRE-RSDPDVAEVLGKIERYN 85

Query: 189 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXDPHRSLPLVIRARVFIAMILSAVYVFSPIDI 10
            +FG  +SG                    DP RSLPLVIRARV+IA++LSA+YV SPIDI
Sbjct: 86  HLFGGNTSGLIQRMQDLPFLLRRLLREIMDPQRSLPLVIRARVYIAVVLSAIYVISPIDI 145

Query: 9   IPE 1
           IPE
Sbjct: 146 IPE 148


>ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333261|gb|EFH63679.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/123 (55%), Positives = 86/123 (69%)
 Frame = -2

Query: 369 HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLGQLRHDPEVAHLLSNIKKYN 190
           HWFC NCIM VW+H S +QPCKCPLCRRPI+LLVP+++++   R+D  VA +L N++ YN
Sbjct: 27  HWFCGNCIMQVWRHGSTLQPCKCPLCRRPISLLVPSEDTIRD-RNDSTVADVLGNLETYN 85

Query: 189 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXDPHRSLPLVIRARVFIAMILSAVYVFSPIDI 10
           R+FG  S+                     DP R+LPLVIRARV+IAMILSA+Y+ SPIDI
Sbjct: 86  RLFGGRSTSLVQRMQDLPFLLRRLLREMMDPQRTLPLVIRARVYIAMILSAIYIISPIDI 145

Query: 9   IPE 1
           IPE
Sbjct: 146 IPE 148


>ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|110740529|dbj|BAE98370.1| hypothetical protein
           [Arabidopsis thaliana] gi|332192128|gb|AEE30249.1|
           C3HC4-type RING finger protein [Arabidopsis thaliana]
          Length = 185

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/123 (54%), Positives = 88/123 (71%)
 Frame = -2

Query: 369 HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLGQLRHDPEVAHLLSNIKKYN 190
           HWFC NCIM+VW+H S ++PCKCPLCRRPI+LLVP++ ++ + R+D  V+ +L +++ YN
Sbjct: 27  HWFCGNCIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETV-RSRNDATVSEVLHDVETYN 85

Query: 189 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXDPHRSLPLVIRARVFIAMILSAVYVFSPIDI 10
           RVFG  SSG                    DP R+LPLVIRARV+IA+ILSA+Y+ SPIDI
Sbjct: 86  RVFGGQSSGLIQRMQDLPFLLRRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDI 145

Query: 9   IPE 1
           IPE
Sbjct: 146 IPE 148


>gb|AAM63145.1| unknown [Arabidopsis thaliana]
          Length = 185

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/123 (54%), Positives = 88/123 (71%)
 Frame = -2

Query: 369 HWFCANCIMMVWQHASGVQPCKCPLCRRPITLLVPTDNSLGQLRHDPEVAHLLSNIKKYN 190
           HWFC NCIM+VW+H S ++PCKCPLCRRPI+LLVP++ ++ + R+D  V+ +L +++ YN
Sbjct: 27  HWFCGNCIMLVWRHGSTLRPCKCPLCRRPISLLVPSEETV-RSRNDATVSEVLHDVETYN 85

Query: 189 RVFGAGSSGXXXXXXXXXXXXXXXXXXXXDPHRSLPLVIRARVFIAMILSAVYVFSPIDI 10
           RVFG  SSG                    DP R+LPLVIRARV+IA+ILSA+Y+ SPIDI
Sbjct: 86  RVFGGQSSGLIQRMQDLPFLLRRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDI 145

Query: 9   IPE 1
           IPE
Sbjct: 146 IPE 148


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