BLASTX nr result
ID: Glycyrrhiza24_contig00013586
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00013586
(1510 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helica... 833 0.0
ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica... 830 0.0
ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [M... 788 0.0
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 737 0.0
emb|CBI22072.3| unnamed protein product [Vitis vinifera] 730 0.0
>ref|XP_003545153.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1164
Score = 833 bits (2153), Expect = 0.0
Identities = 429/505 (84%), Positives = 453/505 (89%), Gaps = 2/505 (0%)
Frame = -2
Query: 1509 ENSDSSRN--AKQNKDDIFGRPSMTXXXXXXXXXXXATRMKTVSNLKQITEQRSKLPIAS 1336
ENS+ + KQ DIF RPSMT A+RM VSNLKQI E RSKLPIAS
Sbjct: 135 ENSEDTTTDGTKQRPGDIFSRPSMTKAEIARRLEALASRMNNVSNLKQINEGRSKLPIAS 194
Query: 1335 FKDVITSTVESHQVVIISGETGCGKTTQVPQFILDYVWGKGEVCKIVCTQPRRISAMSVS 1156
FKD ITSTVESHQVV+ISGETGCGKTTQVPQFILD++WGKGEVCKIVCTQPRRISA SVS
Sbjct: 195 FKDSITSTVESHQVVLISGETGCGKTTQVPQFILDHMWGKGEVCKIVCTQPRRISATSVS 254
Query: 1155 ERISSERGETIGENVGYKIRLESTGGRQSSIVLCTTGVLLRVLVSKGSHSSKRKPMKDDI 976
ERI+SERGETIGENVGYKIRLES GGRQSSIVLCTTGV+LRVLVSKGSHSSK +KD+I
Sbjct: 255 ERIASERGETIGENVGYKIRLESRGGRQSSIVLCTTGVVLRVLVSKGSHSSKTGRVKDEI 314
Query: 975 SGITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATIDDVRFSQYFGSCPIIN 796
SGITHIIMDEIHERDRYSDFMLAIIRDMLP YPHLRLILMSATID RFSQYFG CPII+
Sbjct: 315 SGITHIIMDEIHERDRYSDFMLAIIRDMLPLYPHLRLILMSATIDAARFSQYFGGCPIIH 374
Query: 795 VPGFTYPVKTFYLEDVLSFVKSSNDNNLDSATFSIPINNHELSEEEKLSIDEAINLAWSN 616
VPGFTYPVKTFYLEDVLS VKS +DN+LDS T SIP N ELSEEEKLSIDEAINLAWSN
Sbjct: 375 VPGFTYPVKTFYLEDVLSIVKSRHDNHLDSTTCSIPKNTCELSEEEKLSIDEAINLAWSN 434
Query: 615 DEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGRGRVGDMCMLLSFGADCNLRAKDG 436
DEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAG+GRVGDMCMLLS GAD LRAKDG
Sbjct: 435 DEWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGKGRVGDMCMLLSCGADFCLRAKDG 494
Query: 435 TNALEIAERENQPEAAEIIKKHMANNFSNSMEEEKLLNKYLETINPELVDVVLIEQLIRK 256
ALEIAERENQPEAAEI+KKHM ++FSNSMEE+KLL+KYL T+NPELVD VLIEQLIRK
Sbjct: 495 MAALEIAERENQPEAAEILKKHMDSDFSNSMEEKKLLDKYLATVNPELVDDVLIEQLIRK 554
Query: 255 ICIDSKDGGILVFLPGWDDINRARERLLASSFFKNSSMFMVISLHSMVPTVEQKKVFKRP 76
ICIDS DGGILVFLPGWDDINR RERLLASSFFKNSSMFM+ISLHSMVP++EQKKVF+RP
Sbjct: 555 ICIDSTDGGILVFLPGWDDINRTRERLLASSFFKNSSMFMLISLHSMVPSMEQKKVFRRP 614
Query: 75 PHGCRKIVLSTNIAETAITIDDIVY 1
PHGCRKIVLSTNIAETAITIDDIVY
Sbjct: 615 PHGCRKIVLSTNIAETAITIDDIVY 639
>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
max]
Length = 1162
Score = 830 bits (2143), Expect = 0.0
Identities = 424/504 (84%), Positives = 451/504 (89%), Gaps = 1/504 (0%)
Frame = -2
Query: 1509 ENSDSSRN-AKQNKDDIFGRPSMTXXXXXXXXXXXATRMKTVSNLKQITEQRSKLPIASF 1333
ENSD++ + KQ DDIF RPSMT +RM VSNLKQI E RSKLPI S+
Sbjct: 134 ENSDTATDRTKQRPDDIFSRPSMTKAEIARRLEALTSRMNNVSNLKQIIEGRSKLPIVSY 193
Query: 1332 KDVITSTVESHQVVIISGETGCGKTTQVPQFILDYVWGKGEVCKIVCTQPRRISAMSVSE 1153
KD ITSTVESHQVV+ISGETGCGKTTQVPQFILD++WGKGEVCKIVCTQPRRISA SVSE
Sbjct: 194 KDSITSTVESHQVVLISGETGCGKTTQVPQFILDHMWGKGEVCKIVCTQPRRISATSVSE 253
Query: 1152 RISSERGETIGENVGYKIRLESTGGRQSSIVLCTTGVLLRVLVSKGSHSSKRKPMKDDIS 973
RI+SERGETIGENVGYKIRLES GGRQSSIVLCTTGVLLRVLVSKGSHSSK +KD+IS
Sbjct: 254 RIASERGETIGENVGYKIRLESRGGRQSSIVLCTTGVLLRVLVSKGSHSSKIGRVKDEIS 313
Query: 972 GITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATIDDVRFSQYFGSCPIINV 793
GITHIIMDEIHERDRYSDFMLAIIRDMLP YPHL LILMSATID RFSQYFG CPII+V
Sbjct: 314 GITHIIMDEIHERDRYSDFMLAIIRDMLPLYPHLCLILMSATIDAARFSQYFGGCPIIHV 373
Query: 792 PGFTYPVKTFYLEDVLSFVKSSNDNNLDSATFSIPINNHELSEEEKLSIDEAINLAWSND 613
PGFTYPVKTFYLEDVLS VKS DN+LDS T SIP ELSEEEKLSIDEAINLAWSND
Sbjct: 374 PGFTYPVKTFYLEDVLSIVKSRPDNHLDSTTCSIPKTTCELSEEEKLSIDEAINLAWSND 433
Query: 612 EWDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGRGRVGDMCMLLSFGADCNLRAKDGT 433
EWDLLLELVSSEGTP+LF+YQHSLTGLTPLMVFAG+GRVGDMCMLLS GADC+LRAKDG
Sbjct: 434 EWDLLLELVSSEGTPDLFHYQHSLTGLTPLMVFAGKGRVGDMCMLLSCGADCHLRAKDGM 493
Query: 432 NALEIAERENQPEAAEIIKKHMANNFSNSMEEEKLLNKYLETINPELVDVVLIEQLIRKI 253
ALEIAERENQPEAAEI+KKHM N+FSNS+EE+KLL+KYL T+NPELVD VLIEQLIRKI
Sbjct: 494 TALEIAERENQPEAAEILKKHMDNDFSNSIEEKKLLDKYLATVNPELVDDVLIEQLIRKI 553
Query: 252 CIDSKDGGILVFLPGWDDINRARERLLASSFFKNSSMFMVISLHSMVPTVEQKKVFKRPP 73
CIDS DGGILVFLPGWDDINR RERLLAS FFKNSSMFM+ISLHSMVP++EQKKVF+ PP
Sbjct: 554 CIDSTDGGILVFLPGWDDINRTRERLLASPFFKNSSMFMLISLHSMVPSMEQKKVFRHPP 613
Query: 72 HGCRKIVLSTNIAETAITIDDIVY 1
HGCRKIVLSTNIAETAITIDDIVY
Sbjct: 614 HGCRKIVLSTNIAETAITIDDIVY 637
>ref|XP_003617330.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
gi|355518665|gb|AET00289.1| ATP-dependent RNA helicase
A-like protein [Medicago truncatula]
Length = 1190
Score = 788 bits (2035), Expect = 0.0
Identities = 399/503 (79%), Positives = 433/503 (86%)
Frame = -2
Query: 1509 ENSDSSRNAKQNKDDIFGRPSMTXXXXXXXXXXXATRMKTVSNLKQITEQRSKLPIASFK 1330
E S S NA+ DIF RP MT +R +TVS+LK IT RSKLPIAS+K
Sbjct: 134 EKSGSMVNARHRHSDIFSRPIMTKDEITRKLEAVTSRRETVSDLKVITVLRSKLPIASYK 193
Query: 1329 DVITSTVESHQVVIISGETGCGKTTQVPQFILDYVWGKGEVCKIVCTQPRRISAMSVSER 1150
D ITS VESHQVV+ISGETGCGKTTQVPQ+ILDY+WGKGE CKI+CTQPRRISAMSVSER
Sbjct: 194 DAITSAVESHQVVLISGETGCGKTTQVPQYILDYMWGKGETCKILCTQPRRISAMSVSER 253
Query: 1149 ISSERGETIGENVGYKIRLESTGGRQSSIVLCTTGVLLRVLVSKGSHSSKRKPMKDDISG 970
IS ERGE GENVGYKIRL+S GG+QSSIVLCTTGVLLRVLVSKGS S + P KD+IS
Sbjct: 254 ISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTTGVLLRVLVSKGSRRSMKNPAKDEISD 313
Query: 969 ITHIIMDEIHERDRYSDFMLAIIRDMLPSYPHLRLILMSATIDDVRFSQYFGSCPIINVP 790
ITHIIMDEIHERDRYSDFMLAI+RDMLP YPHLRL+LMSATID RFSQYFG CP+I VP
Sbjct: 314 ITHIIMDEIHERDRYSDFMLAIMRDMLPLYPHLRLVLMSATIDTARFSQYFGGCPVIQVP 373
Query: 789 GFTYPVKTFYLEDVLSFVKSSNDNNLDSATFSIPINNHELSEEEKLSIDEAINLAWSNDE 610
GFTYPVKT+YLEDVLS VKSSND D +TFSIP NNH +SEE KLS DEAINLAWSNDE
Sbjct: 374 GFTYPVKTYYLEDVLSAVKSSND---DGSTFSIPTNNHMISEEHKLSFDEAINLAWSNDE 430
Query: 609 WDLLLELVSSEGTPELFNYQHSLTGLTPLMVFAGRGRVGDMCMLLSFGADCNLRAKDGTN 430
WDLL ELVSSE TPELFNYQHSLTGLTPLMVFAG+GR+G+MCMLLSFGADCNLR+KDGT
Sbjct: 431 WDLLSELVSSEETPELFNYQHSLTGLTPLMVFAGKGRIGEMCMLLSFGADCNLRSKDGTT 490
Query: 429 ALEIAERENQPEAAEIIKKHMANNFSNSMEEEKLLNKYLETINPELVDVVLIEQLIRKIC 250
ALEIAERENQPEAAEIIKKHM + S+S EE+ +LNKYLE + PE+VDVVLIEQLIRKIC
Sbjct: 491 ALEIAERENQPEAAEIIKKHM--DGSSSTEEQSILNKYLERVRPEIVDVVLIEQLIRKIC 548
Query: 249 IDSKDGGILVFLPGWDDINRARERLLASSFFKNSSMFMVISLHSMVPTVEQKKVFKRPPH 70
DSKDGGILVF GWDDINRARE+LLASSFF N S F+VISLHSMVPT+EQKKVFKRPP
Sbjct: 549 TDSKDGGILVFFSGWDDINRAREKLLASSFFNNPSKFVVISLHSMVPTLEQKKVFKRPPP 608
Query: 69 GCRKIVLSTNIAETAITIDDIVY 1
GCRKIVLSTN+AETA+TIDDIVY
Sbjct: 609 GCRKIVLSTNLAETAVTIDDIVY 631
>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 737 bits (1902), Expect = 0.0
Identities = 366/495 (73%), Positives = 425/495 (85%), Gaps = 4/495 (0%)
Frame = -2
Query: 1473 KDDIFGRPSMTXXXXXXXXXXXATRMKTVSNLKQITEQRSKLPIASFKDVITSTVESHQV 1294
KDDIFGRPSM A+R++ +L+QITE RSKLPIASFKDVITST+ESHQV
Sbjct: 141 KDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGRSKLPIASFKDVITSTIESHQV 200
Query: 1293 VIISGETGCGKTTQVPQFILDYVWGKGEVCKIVCTQPRRISAMSVSERISSERGETIGEN 1114
V+ISGETGCGKTTQVPQF+LDY+WGKGE CKIVCTQPRRISA SV+ERIS E+GE +G++
Sbjct: 201 VLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPRRISATSVAERISFEKGENVGDS 260
Query: 1113 VGYKIRLESTGGRQSSIVLCTTGVLLRVLVSKGSHSSK----RKPMKDDISGITHIIMDE 946
VGYKIRLES GGR SSI+ CT G+LLRVLVSKG+ K RK K DIS ITHII+DE
Sbjct: 261 VGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGTDRLKPEALRKAAKRDISDITHIIVDE 320
Query: 945 IHERDRYSDFMLAIIRDMLPSYPHLRLILMSATIDDVRFSQYFGSCPIINVPGFTYPVKT 766
IHERDRYSDFMLAI+RDML SYPHLRLILMSATID RFSQYFG CPII VPGFTYPVKT
Sbjct: 321 IHERDRYSDFMLAILRDMLASYPHLRLILMSATIDAERFSQYFGGCPIIRVPGFTYPVKT 380
Query: 765 FYLEDVLSFVKSSNDNNLDSATFSIPINNHELSEEEKLSIDEAINLAWSNDEWDLLLELV 586
FYLEDVLS +KS+ +NNLDS S+P+ + +L E+ +++DEAINLAWSNDE+D LL+ V
Sbjct: 381 FYLEDVLSILKSTGNNNLDSTLLSLPVEDPKLIEDYGVALDEAINLAWSNDEFDPLLDFV 440
Query: 585 SSEGTPELFNYQHSLTGLTPLMVFAGRGRVGDMCMLLSFGADCNLRAKDGTNALEIAERE 406
SSEGTP++FNYQHS TGLTPLMVFAG+GRV D+CM+LSFGADC+L+A D T AL++AERE
Sbjct: 441 SSEGTPQVFNYQHSSTGLTPLMVFAGKGRVADVCMMLSFGADCHLKANDDTTALDLAERE 500
Query: 405 NQPEAAEIIKKHMANNFSNSMEEEKLLNKYLETINPELVDVVLIEQLIRKICIDSKDGGI 226
N EAAE+IK+HM N SNS+EE++LL+KYL T NPE++DV L+EQL+RKIC DSKDG I
Sbjct: 501 NHREAAEMIKQHMENLLSNSVEEQQLLDKYLATNNPEIIDVALVEQLLRKICNDSKDGAI 560
Query: 225 LVFLPGWDDINRARERLLASSFFKNSSMFMVISLHSMVPTVEQKKVFKRPPHGCRKIVLS 46
LVFLPGWDDINR RE+LL++SFFK+SS F+VISLHSMVP+VEQKKVFKRPP GCRKIVLS
Sbjct: 561 LVFLPGWDDINRTREKLLSASFFKDSSKFVVISLHSMVPSVEQKKVFKRPPPGCRKIVLS 620
Query: 45 TNIAETAITIDDIVY 1
TNI+ETAITIDD+VY
Sbjct: 621 TNISETAITIDDVVY 635
>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 730 bits (1884), Expect = 0.0
Identities = 362/491 (73%), Positives = 421/491 (85%)
Frame = -2
Query: 1473 KDDIFGRPSMTXXXXXXXXXXXATRMKTVSNLKQITEQRSKLPIASFKDVITSTVESHQV 1294
KDDIFGRPSM A+R++ +L+QITE RSKLPIASFKDVITST+ESHQV
Sbjct: 141 KDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITEGRSKLPIASFKDVITSTIESHQV 200
Query: 1293 VIISGETGCGKTTQVPQFILDYVWGKGEVCKIVCTQPRRISAMSVSERISSERGETIGEN 1114
V+ISGETGCGKTTQVPQF+LDY+WGKGE CKIVCTQPRRISA SV+ERIS E+GE +G++
Sbjct: 201 VLISGETGCGKTTQVPQFVLDYMWGKGEACKIVCTQPRRISATSVAERISFEKGENVGDS 260
Query: 1113 VGYKIRLESTGGRQSSIVLCTTGVLLRVLVSKGSHSSKRKPMKDDISGITHIIMDEIHER 934
VGYKIRLES GGR SSI+ CT G+LLRVLVSKG+ DIS ITHII+DEIHER
Sbjct: 261 VGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGTDR--------DISDITHIIVDEIHER 312
Query: 933 DRYSDFMLAIIRDMLPSYPHLRLILMSATIDDVRFSQYFGSCPIINVPGFTYPVKTFYLE 754
DRYSDFMLAI+RDML SYPHLRLILMSATID RFSQYFG CPII VPGFTYPVKTFYLE
Sbjct: 313 DRYSDFMLAILRDMLASYPHLRLILMSATIDAERFSQYFGGCPIIRVPGFTYPVKTFYLE 372
Query: 753 DVLSFVKSSNDNNLDSATFSIPINNHELSEEEKLSIDEAINLAWSNDEWDLLLELVSSEG 574
DVLS +KS+ +NNLDS S+P+ + +L E+ +++DEAINLAWSNDE+D LL+ VSSEG
Sbjct: 373 DVLSILKSTGNNNLDSTLLSLPVEDPKLIEDYGVALDEAINLAWSNDEFDPLLDFVSSEG 432
Query: 573 TPELFNYQHSLTGLTPLMVFAGRGRVGDMCMLLSFGADCNLRAKDGTNALEIAERENQPE 394
TP++FNYQHS TGLTPLMVFAG+GRV D+CM+LSFGADC+L+A D T AL++AEREN E
Sbjct: 433 TPQVFNYQHSSTGLTPLMVFAGKGRVADVCMMLSFGADCHLKANDDTTALDLAERENHRE 492
Query: 393 AAEIIKKHMANNFSNSMEEEKLLNKYLETINPELVDVVLIEQLIRKICIDSKDGGILVFL 214
AAE+IK+HM N SNS+EE++LL+KYL T NPE++DV L+EQL+RKIC DSKDG ILVFL
Sbjct: 493 AAEMIKQHMENLLSNSVEEQQLLDKYLATNNPEIIDVALVEQLLRKICNDSKDGAILVFL 552
Query: 213 PGWDDINRARERLLASSFFKNSSMFMVISLHSMVPTVEQKKVFKRPPHGCRKIVLSTNIA 34
PGWDDINR RE+LL++SFFK+SS F+VISLHSMVP+VEQKKVFKRPP GCRKIVLSTNI+
Sbjct: 553 PGWDDINRTREKLLSASFFKDSSKFVVISLHSMVPSVEQKKVFKRPPPGCRKIVLSTNIS 612
Query: 33 ETAITIDDIVY 1
ETAITIDD+VY
Sbjct: 613 ETAITIDDVVY 623