BLASTX nr result

ID: Glycyrrhiza24_contig00013574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013574
         (1915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago t...   726   0.0  
ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   721   0.0  
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   696   0.0  
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...   515   e-143
emb|CBI30553.3| unnamed protein product [Vitis vinifera]              515   e-143

>ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago truncatula]
            gi|355498141|gb|AES79344.1| E3 ubiquitin-protein ligase
            ubr1 [Medicago truncatula]
          Length = 2105

 Score =  726 bits (1875), Expect(3) = 0.0
 Identities = 355/405 (87%), Positives = 368/405 (90%), Gaps = 2/405 (0%)
 Frame = +3

Query: 3    VQLFAESICSGVSLSHANNDISGRGDMLSVLKRIEMDLSNTDICFWNRASDPVLAHDPFS 182
            VQLFAESICSGVSLSHA+N ISGRGDMLSVLK IEMD SNTDICFWN ASDPVLAHDPFS
Sbjct: 1611 VQLFAESICSGVSLSHADNVISGRGDMLSVLKHIEMDQSNTDICFWNEASDPVLAHDPFS 1670

Query: 183  TLMWVLFCLPHPFLSCEASLLSLVHVFYMVTVTQAIILYYEKSQDKSR-ESALSDCLITD 359
            TLMWVLFCLPHPFLSCE SLLSLVH FYMV VTQAIILY+EKS DKS  ES LSDC+ITD
Sbjct: 1671 TLMWVLFCLPHPFLSCEESLLSLVHAFYMVAVTQAIILYHEKSLDKSSSESTLSDCMITD 1730

Query: 360  IYKIMGESGCAWQYFVSNYFDPNVDIKDAIRRFSFPYLRRCALLWKILYSSIPAPFCDGE 539
            I KIMGESGCA QYFVSNYFD NVDIKDAIRRFS PYLRRCALLWKILYSSIPAPFCDGE
Sbjct: 1731 INKIMGESGCASQYFVSNYFDANVDIKDAIRRFSLPYLRRCALLWKILYSSIPAPFCDGE 1790

Query: 540  NMLDRSWNAPRDTM-DRVNINMFEVTKIQELENMFKIPSLDVVLKDELTRSSVSIWCRHF 716
            N  +RSW+ PRDTM   V+IN FEVTKIQELENMFKIP LDVVLKDEL+RSSVSIWCRHF
Sbjct: 1791 NTSNRSWHLPRDTMCSSVDINKFEVTKIQELENMFKIPPLDVVLKDELSRSSVSIWCRHF 1850

Query: 717  CKVFESQRIQRNMHVTPAVPFELMRLPNVYQDLLQRCIKQRCPECKSRLDEPALCLLCGR 896
            CK FES+RIQRN+HVTPAVPFELMRLPNVYQDLLQRC+KQRCPECK RLD+PALCLLCGR
Sbjct: 1851 CKEFESKRIQRNIHVTPAVPFELMRLPNVYQDLLQRCVKQRCPECKGRLDDPALCLLCGR 1910

Query: 897  LCSPSWKSCCRESGCQTHAATCGAGTGVFXXXXXXXXXXQRSARQAPWPSPYLDAFGEED 1076
            LCSPSWKSCCRESGCQTH+ TCGAGTGVF          QRSARQAPWPSPYLDAFGEED
Sbjct: 1911 LCSPSWKSCCRESGCQTHSVTCGAGTGVFLLTRRTTILLQRSARQAPWPSPYLDAFGEED 1970

Query: 1077 FEMNRGKPLYLNEERYAALTYMVASHGLDRSSKVLGQTTIGSFFL 1211
            FEMNRGKPL+LN ERYAALTYMVASHGLDRSSKVLGQTTIGSFFL
Sbjct: 1971 FEMNRGKPLFLNMERYAALTYMVASHGLDRSSKVLGQTTIGSFFL 2015



 Score = 32.7 bits (73), Expect(3) = 0.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 1328 LANQKIFSPCYISC*KCTAHSVAA 1399
            L NQK FSPCY+ C  CT   + A
Sbjct: 2041 LVNQKSFSPCYVLCGNCTVSGLHA 2064



 Score = 28.9 bits (63), Expect(3) = 0.0
 Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = +1

Query: 1261 WTD--LWRVETGSRYANISCYTL 1323
            W D  LW V  GSR ANISCYTL
Sbjct: 2018 WLDKSLW-VGIGSRCANISCYTL 2039


>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score =  721 bits (1861), Expect = 0.0
 Identities = 348/405 (85%), Positives = 372/405 (91%), Gaps = 1/405 (0%)
 Frame = +3

Query: 3    VQLFAESICSGVSLSHANNDISGRGDMLSVLKRIEMDLSNTDICFWNRASDPVLAHDPFS 182
            VQL AESICSGVSL++ANND SGRGDMLS+LK+IEMDLSNT+I FW++ASDPVL HDPFS
Sbjct: 1633 VQLLAESICSGVSLNYANNDESGRGDMLSILKQIEMDLSNTNISFWSQASDPVLLHDPFS 1692

Query: 183  TLMWVLFCLPHPFLSCEASLLSLVHVFYMVTVTQAIILYYEKSQDK-SRESALSDCLITD 359
            TLMWVLFCLPHPFLSCE SLLSLVHVFY+V VTQAIILYYEKS+DK SRESALSDCLITD
Sbjct: 1693 TLMWVLFCLPHPFLSCEESLLSLVHVFYIVAVTQAIILYYEKSKDKPSRESALSDCLITD 1752

Query: 360  IYKIMGESGCAWQYFVSNYFDPNVDIKDAIRRFSFPYLRRCALLWKILYSSIPAPFCDGE 539
            IY +M ESG A QYFVSNYFDPNVDIK+AIRRF+FPYLRRCALLWKILYSSIPAPFCD E
Sbjct: 1753 IYNVMDESGYAQQYFVSNYFDPNVDIKNAIRRFTFPYLRRCALLWKILYSSIPAPFCDEE 1812

Query: 540  NMLDRSWNAPRDTMDRVNINMFEVTKIQELENMFKIPSLDVVLKDELTRSSVSIWCRHFC 719
            N+LDRSWNAP+D MD  NI +FEV KIQELE MFKIPSLD+VLKDEL+RS+VSIWC HFC
Sbjct: 1813 NILDRSWNAPKDIMDWANIEIFEVAKIQELEKMFKIPSLDMVLKDELSRSTVSIWCHHFC 1872

Query: 720  KVFESQRIQRNMHVTPAVPFELMRLPNVYQDLLQRCIKQRCPECKSRLDEPALCLLCGRL 899
            K F+ +RIQ+NMHVTPAVPFELMRLPNVYQDLLQRCIKQRCPECKS LD+PALCLLCGRL
Sbjct: 1873 KEFDLRRIQQNMHVTPAVPFELMRLPNVYQDLLQRCIKQRCPECKSVLDDPALCLLCGRL 1932

Query: 900  CSPSWKSCCRESGCQTHAATCGAGTGVFXXXXXXXXXXQRSARQAPWPSPYLDAFGEEDF 1079
            CSPSWKSCCRESGCQTHA TCGAGTGVF          QRSARQAPWPSPYLDAFGEEDF
Sbjct: 1933 CSPSWKSCCRESGCQTHAVTCGAGTGVFLLIKRTTILLQRSARQAPWPSPYLDAFGEEDF 1992

Query: 1080 EMNRGKPLYLNEERYAALTYMVASHGLDRSSKVLGQTTIGSFFLV 1214
            EM+RGKPLYLNEERYAALTYMVASHGLDRSS+VLGQTTIGSFFLV
Sbjct: 1993 EMHRGKPLYLNEERYAALTYMVASHGLDRSSRVLGQTTIGSFFLV 2037


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score =  696 bits (1797), Expect = 0.0
 Identities = 339/405 (83%), Positives = 363/405 (89%), Gaps = 1/405 (0%)
 Frame = +3

Query: 3    VQLFAESICSGVSLSHANNDISGRGDMLSVLKRIEMDLSNTDICFWNRASDPVLAHDPFS 182
            VQLFAESICS VSL++ NN+ SG GDMLS+LK I+MDLSNT I FW++ASDPVL HDPFS
Sbjct: 1633 VQLFAESICSDVSLNYTNNE-SGTGDMLSILKHIDMDLSNTYISFWSQASDPVLFHDPFS 1691

Query: 183  TLMWVLFCLPHPFLSCEASLLSLVHVFYMVTVTQAIILYYEKSQDK-SRESALSDCLITD 359
            TLMWVLFCLPHPFLSCE SLLSLVHVFY+V VTQAIILYYEKS+DK SRESALSDCLITD
Sbjct: 1692 TLMWVLFCLPHPFLSCEESLLSLVHVFYIVAVTQAIILYYEKSKDKPSRESALSDCLITD 1751

Query: 360  IYKIMGESGCAWQYFVSNYFDPNVDIKDAIRRFSFPYLRRCALLWKILYSSIPAPFCDGE 539
            IY +M ESG   QYFVSNYFDPN DIK+AIRRF+FPYLRRCALLWKILYSSIPAPFCD E
Sbjct: 1752 IYNVMDESGYTQQYFVSNYFDPNGDIKNAIRRFTFPYLRRCALLWKILYSSIPAPFCDEE 1811

Query: 540  NMLDRSWNAPRDTMDRVNINMFEVTKIQELENMFKIPSLDVVLKDELTRSSVSIWCRHFC 719
            N+LDRSW AP+DTMDR NI +FEVTKIQELE MFKIPSLDVVLKDEL+RS+VSIWC HFC
Sbjct: 1812 NILDRSWIAPKDTMDRANIEIFEVTKIQELEKMFKIPSLDVVLKDELSRSTVSIWCHHFC 1871

Query: 720  KVFESQRIQRNMHVTPAVPFELMRLPNVYQDLLQRCIKQRCPECKSRLDEPALCLLCGRL 899
            K F+ +RIQ+NMHVTPAVPFELMRLPNVYQDLLQRCIKQRCP+CKS LDEPALCLLCGRL
Sbjct: 1872 KEFDLRRIQQNMHVTPAVPFELMRLPNVYQDLLQRCIKQRCPDCKSVLDEPALCLLCGRL 1931

Query: 900  CSPSWKSCCRESGCQTHAATCGAGTGVFXXXXXXXXXXQRSARQAPWPSPYLDAFGEEDF 1079
            C P WKSCCRE+GCQTHA  CGAGTGVF           RSARQAPWPSPYLD FGEEDF
Sbjct: 1932 CCPIWKSCCRENGCQTHAVGCGAGTGVFLLIRRTTILLLRSARQAPWPSPYLDDFGEEDF 1991

Query: 1080 EMNRGKPLYLNEERYAALTYMVASHGLDRSSKVLGQTTIGSFFLV 1214
            EMNRGKPLYLNEERYAALTYMVASHGLDRSS+VLG+TTIGSFFLV
Sbjct: 1992 EMNRGKPLYLNEERYAALTYMVASHGLDRSSRVLGRTTIGSFFLV 2036


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score =  515 bits (1326), Expect = e-143
 Identities = 253/405 (62%), Positives = 305/405 (75%), Gaps = 1/405 (0%)
 Frame = +3

Query: 3    VQLFAESICSGVSLSHANNDISGRG-DMLSVLKRIEMDLSNTDICFWNRASDPVLAHDPF 179
            +QLFA S+C G+S+    +  S +G +MLS+L+ IE ++S  DI FW RASDPVLAHDPF
Sbjct: 1644 IQLFAGSVCHGISVDEFPSTASTQGGNMLSILEHIETEVSYPDIQFWKRASDPVLAHDPF 1703

Query: 180  STLMWVLFCLPHPFLSCEASLLSLVHVFYMVTVTQAIILYYEKSQDKSRESALSDCLITD 359
            S+L+WVLFCLP+PFL C+    SLVH++Y V+V QAII Y  K Q K       DCLITD
Sbjct: 1704 SSLIWVLFCLPYPFLLCKEVFFSLVHLYYAVSVVQAIITYCGKQQCKINGLGFQDCLITD 1763

Query: 360  IYKIMGESGCAWQYFVSNYFDPNVDIKDAIRRFSFPYLRRCALLWKILYSSIPAPFCDGE 539
            I  I+G+SG A  YFVS+Y DP+ +IKD IR  SFPYLRRCALLWK+L SSI APFCD  
Sbjct: 1764 ISNIVGKSGFAPLYFVSSYIDPSCNIKDVIRSLSFPYLRRCALLWKLLNSSITAPFCDRP 1823

Query: 540  NMLDRSWNAPRDTMDRVNINMFEVTKIQELENMFKIPSLDVVLKDELTRSSVSIWCRHFC 719
             + DR +NA  D MD  N  + ++  +++LENMFKIP LD VLKDE  RS V  W  HF 
Sbjct: 1824 LVFDRPFNAIDDMMDCTNGALLDLIHVEQLENMFKIPQLDDVLKDEALRSLVQTWFHHFS 1883

Query: 720  KVFESQRIQRNMHVTPAVPFELMRLPNVYQDLLQRCIKQRCPECKSRLDEPALCLLCGRL 899
            K FE   +   ++ TPAVPF+LM+LP+VY+DLLQR IKQ+CP+CK+ L++P LCLLCGRL
Sbjct: 1884 KAFEVCSLPSVLYSTPAVPFKLMQLPHVYEDLLQRYIKQQCPDCKTVLNDPVLCLLCGRL 1943

Query: 900  CSPSWKSCCRESGCQTHAATCGAGTGVFXXXXXXXXXXQRSARQAPWPSPYLDAFGEEDF 1079
            CSPSWK CCRE+GCQ HA TCGAGTGV           QRSARQAPWPS YLDAFGEED 
Sbjct: 1944 CSPSWKPCCRENGCQAHAMTCGAGTGVSLLIKKTTILLQRSARQAPWPSLYLDAFGEEDI 2003

Query: 1080 EMNRGKPLYLNEERYAALTYMVASHGLDRSSKVLGQTTIGSFFLV 1214
            EM+RGKPLYLN+ERYAAL++MVASHGLDRSSKVLG+TTI +FFL+
Sbjct: 2004 EMHRGKPLYLNKERYAALSHMVASHGLDRSSKVLGETTIAAFFLI 2048


>emb|CBI30553.3| unnamed protein product [Vitis vinifera]
          Length = 1254

 Score =  515 bits (1326), Expect = e-143
 Identities = 253/405 (62%), Positives = 305/405 (75%), Gaps = 1/405 (0%)
 Frame = +3

Query: 3    VQLFAESICSGVSLSHANNDISGRG-DMLSVLKRIEMDLSNTDICFWNRASDPVLAHDPF 179
            +QLFA S+C G+S+    +  S +G +MLS+L+ IE ++S  DI FW RASDPVLAHDPF
Sbjct: 850  IQLFAGSVCHGISVDEFPSTASTQGGNMLSILEHIETEVSYPDIQFWKRASDPVLAHDPF 909

Query: 180  STLMWVLFCLPHPFLSCEASLLSLVHVFYMVTVTQAIILYYEKSQDKSRESALSDCLITD 359
            S+L+WVLFCLP+PFL C+    SLVH++Y V+V QAII Y  K Q K       DCLITD
Sbjct: 910  SSLIWVLFCLPYPFLLCKEVFFSLVHLYYAVSVVQAIITYCGKQQCKINGLGFQDCLITD 969

Query: 360  IYKIMGESGCAWQYFVSNYFDPNVDIKDAIRRFSFPYLRRCALLWKILYSSIPAPFCDGE 539
            I  I+G+SG A  YFVS+Y DP+ +IKD IR  SFPYLRRCALLWK+L SSI APFCD  
Sbjct: 970  ISNIVGKSGFAPLYFVSSYIDPSCNIKDVIRSLSFPYLRRCALLWKLLNSSITAPFCDRP 1029

Query: 540  NMLDRSWNAPRDTMDRVNINMFEVTKIQELENMFKIPSLDVVLKDELTRSSVSIWCRHFC 719
             + DR +NA  D MD  N  + ++  +++LENMFKIP LD VLKDE  RS V  W  HF 
Sbjct: 1030 LVFDRPFNAIDDMMDCTNGALLDLIHVEQLENMFKIPQLDDVLKDEALRSLVQTWFHHFS 1089

Query: 720  KVFESQRIQRNMHVTPAVPFELMRLPNVYQDLLQRCIKQRCPECKSRLDEPALCLLCGRL 899
            K FE   +   ++ TPAVPF+LM+LP+VY+DLLQR IKQ+CP+CK+ L++P LCLLCGRL
Sbjct: 1090 KAFEVCSLPSVLYSTPAVPFKLMQLPHVYEDLLQRYIKQQCPDCKTVLNDPVLCLLCGRL 1149

Query: 900  CSPSWKSCCRESGCQTHAATCGAGTGVFXXXXXXXXXXQRSARQAPWPSPYLDAFGEEDF 1079
            CSPSWK CCRE+GCQ HA TCGAGTGV           QRSARQAPWPS YLDAFGEED 
Sbjct: 1150 CSPSWKPCCRENGCQAHAMTCGAGTGVSLLIKKTTILLQRSARQAPWPSLYLDAFGEEDI 1209

Query: 1080 EMNRGKPLYLNEERYAALTYMVASHGLDRSSKVLGQTTIGSFFLV 1214
            EM+RGKPLYLN+ERYAAL++MVASHGLDRSSKVLG+TTI +FFL+
Sbjct: 1210 EMHRGKPLYLNKERYAALSHMVASHGLDRSSKVLGETTIAAFFLI 1254


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