BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013562
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containi...   850   0.0  
ref|XP_002533784.1| pentatricopeptide repeat-containing protein,...   704   0.0  
ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containi...   703   0.0  
emb|CBI31083.3| unnamed protein product [Vitis vinifera]              699   0.0  
ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containi...   673   0.0  

>ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Glycine max]
          Length = 893

 Score =  850 bits (2196), Expect = 0.0
 Identities = 423/493 (85%), Positives = 440/493 (89%)
 Frame = +1

Query: 1    VIEWLQRCERFKSHKLRHIYTAALDALGKLRRPVEALNVFHAMQQQMSSYPDLVAYHSIA 180
            VIEWLQ+ ERFKSHKLRHIYTAALDALGK RRPVEALN+FHAMQQQMSSYPDLVAYHSIA
Sbjct: 399  VIEWLQKRERFKSHKLRHIYTAALDALGKSRRPVEALNIFHAMQQQMSSYPDLVAYHSIA 458

Query: 181  VTLGQAGHMKELFDVIDIMRSPPKKKFKAGIFENWDPRLEPDIIVYNAVLNACVKWKQWE 360
            VTLGQAGHMKELFDVIDIMRSPPKKKFK GIFENWDPRLEPDI+VY+AVLNACV+ KQWE
Sbjct: 459  VTLGQAGHMKELFDVIDIMRSPPKKKFKTGIFENWDPRLEPDIVVYHAVLNACVRRKQWE 518

Query: 361  GAFWVLQQLKKQGIQPSAATYGLVMEVMFSCGKYNLVHEFFRKLQKSSIPNSLTYRVLVN 540
            GAFWVLQQLKKQG  PSA TYGLVMEVM SCGKYNLVHEFFRKLQKS  PNSLTYRVLVN
Sbjct: 519  GAFWVLQQLKKQGQPPSATTYGLVMEVMLSCGKYNLVHEFFRKLQKSFSPNSLTYRVLVN 578

Query: 541  TFWKEGKTDEAISAVQEMERRGIVGSASLYYDLARCLCAAGRSREALMQIDKICKVANKP 720
            T W+EGK DEAI AVQEMERRGIVGSASLYYDLARCL AAGRS EAL QIDKICKVANKP
Sbjct: 579  TLWQEGKPDEAILAVQEMERRGIVGSASLYYDLARCLSAAGRSHEALKQIDKICKVANKP 638

Query: 721  LVVTYTGLMQASLDSGNIQDGAYIFEKMKEICAPNLVTYNIMLKAYLEHGMFQEAKGLFE 900
            LVVTYTGLMQASLD+GNIQDGAYIFEKMKEICAPNLVT NI+LKAYLEHGMFQEAK LFE
Sbjct: 639  LVVTYTGLMQASLDAGNIQDGAYIFEKMKEICAPNLVTCNIILKAYLEHGMFQEAKVLFE 698

Query: 901  QMLENTNHLMSRKTDHKMRVIPDIYTFNTMLDACVAEKRWDYFDHVYQRMLCHGYHFNPK 1080
            QM EN N L    TD+KM V+PD Y+FNTMLDACVAEKRWDYFDHVYQRML HGYHFNPK
Sbjct: 699  QMSENANRLRG-NTDYKMLVVPDTYSFNTMLDACVAEKRWDYFDHVYQRMLYHGYHFNPK 757

Query: 1081 RHLRMILEALRAGKEEPLEITWKHLAATDRIPPVSLIKERFCMKLEKDDYVAALKCITNN 1260
            RHLRMILEA +AGKE PLEITWKHL  TDRIPP  LIKERFC KLEKDDYVAAL CI NN
Sbjct: 758  RHLRMILEASKAGKERPLEITWKHLTDTDRIPPAPLIKERFCAKLEKDDYVAALTCIINN 817

Query: 1261 PPKDMQPFSKSSWLNLFQENSQRFQKDTLVRLMDAASNIVXXXXXXXXTLVCLVQSCKEF 1440
            PPKD+QPFSKSSWL LF+ENSQRFQKDT+V LM+ ASNIV        TL  L+QSCKEF
Sbjct: 818  PPKDLQPFSKSSWLKLFKENSQRFQKDTIVGLMNEASNIVSNNSFPNPTLEYLIQSCKEF 877

Query: 1441 CFATDLSAADMDS 1479
             FAT LS ADMDS
Sbjct: 878  LFATVLSTADMDS 890


>ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526285|gb|EEF28597.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 856

 Score =  704 bits (1816), Expect = 0.0
 Identities = 338/480 (70%), Positives = 401/480 (83%)
 Frame = +1

Query: 1    VIEWLQRCERFKSHKLRHIYTAALDALGKLRRPVEALNVFHAMQQQMSSYPDLVAYHSIA 180
            VIEWLQ  ERFKSH+LR+IYT AL+ LGK +RPVEALNVFH MQQQMSSYPDLVAYH IA
Sbjct: 354  VIEWLQMRERFKSHRLRNIYTTALNVLGKAQRPVEALNVFHVMQQQMSSYPDLVAYHCIA 413

Query: 181  VTLGQAGHMKELFDVIDIMRSPPKKKFKAGIFENWDPRLEPDIIVYNAVLNACVKWKQWE 360
            VTLGQAGHM++LFDVID MRSPPKKKFK      WDPRLEPDI+VYNAVLNACV+ KQWE
Sbjct: 414  VTLGQAGHMEQLFDVIDSMRSPPKKKFKMAAVHKWDPRLEPDIVVYNAVLNACVQRKQWE 473

Query: 361  GAFWVLQQLKKQGIQPSAATYGLVMEVMFSCGKYNLVHEFFRKLQKSSIPNSLTYRVLVN 540
            GAFWVLQQLK+QG+QPS  TYGL+MEVMF+CGKYNLVHEFFRK+QKSSIPN+L Y+VLVN
Sbjct: 474  GAFWVLQQLKQQGLQPSTTTYGLIMEVMFACGKYNLVHEFFRKVQKSSIPNALVYKVLVN 533

Query: 541  TFWKEGKTDEAISAVQEMERRGIVGSASLYYDLARCLCAAGRSREALMQIDKICKVANKP 720
            T W+EGKTDEA+ AV+EMERRGIVG A+LYYDLARCLC+AGR +EAL+QI+KIC+VANKP
Sbjct: 534  TLWREGKTDEAVLAVEEMERRGIVGFAALYYDLARCLCSAGRCQEALLQIEKICRVANKP 593

Query: 721  LVVTYTGLMQASLDSGNIQDGAYIFEKMKEICAPNLVTYNIMLKAYLEHGMFQEAKGLFE 900
            LVVTYTGL+QA LDSGNI +  YIF +MK  C+PNLVT+N+MLKAY EHG+F++AK LF 
Sbjct: 594  LVVTYTGLIQACLDSGNIHNAVYIFNQMKHFCSPNLVTFNVMLKAYFEHGLFEDAKELFH 653

Query: 901  QMLENTNHLMSRKTDHKMRVIPDIYTFNTMLDACVAEKRWDYFDHVYQRMLCHGYHFNPK 1080
            +M E++NH+     D+K+RVIPDIYTFNTMLDAC++EK WD F++VY+RML HG+HFN K
Sbjct: 654  KMTEDSNHIRGNH-DYKVRVIPDIYTFNTMLDACISEKSWDDFEYVYRRMLHHGFHFNGK 712

Query: 1081 RHLRMILEALRAGKEEPLEITWKHLAATDRIPPVSLIKERFCMKLEKDDYVAALKCITNN 1260
            RHLRMIL+A RAGK EPLE+TWKHLA  DRIPP +LIKERF + LEKDD  +AL CIT N
Sbjct: 713  RHLRMILDASRAGKVEPLEMTWKHLARADRIPPPNLIKERFRIMLEKDDCKSALACITTN 772

Query: 1261 PPKDMQPFSKSSWLNLFQENSQRFQKDTLVRLMDAASNIVXXXXXXXXTLVCLVQSCKEF 1440
            P  +   F K +WLNLF+EN+++ ++DTL++L    S +V         L  L+ SC +F
Sbjct: 773  PMGESPAFHKVAWLNLFKENAEQIRRDTLIQLKHEVSMLV---NPPDPVLQNLLASCNDF 829


>ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Vitis vinifera]
          Length = 846

 Score =  703 bits (1815), Expect = 0.0
 Identities = 353/510 (69%), Positives = 413/510 (80%), Gaps = 1/510 (0%)
 Frame = +1

Query: 1    VIEWLQRCERFKSHKLRHIYTAALDALGKLRRPVEALNVFHAMQQQMSSYPDLVAYHSIA 180
            V+EWLQ  ERFKSHKLR+IYTAALD LGK RRPVEALNVF+AM QQMSSYPDLVAYH IA
Sbjct: 337  VLEWLQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIA 396

Query: 181  VTLGQAGHMKELFDVIDIMRSPPKKKFKAGIFENWDPRLEPDIIVYNAVLNACVKWKQWE 360
            VTLGQAGHMKELFDVID MRSPP+KKFK G  E WDPRLEPDI+VYNAVLNACV+ KQWE
Sbjct: 397  VTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWE 456

Query: 361  GAFWVLQQLKKQGIQPSAATYGLVMEVMFSCGKYNLVHEFFRKLQKSSIPNSLTYRVLVN 540
            GAFWVLQQLK+Q  +PS  TYGLVMEVMF CGKYNLVHEFF K+QKSSIPN+LTY+VLVN
Sbjct: 457  GAFWVLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVN 516

Query: 541  TFWKEGKTDEAISAVQEMERRGIVGSASLYYDLARCLCAAGRSREALMQIDKICKVANKP 720
            T W+EGKTDEA+ AVQ+ME+RG+VGSA+LYYDLARCLC+AGR +EALMQI+KICKVANKP
Sbjct: 517  TLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKVANKP 576

Query: 721  LVVTYTGLMQASLDSGNIQDGAYIFEKMKEICAPNLVTYNIMLKAYLEHGMFQEAKGLFE 900
            LVVTYTGL+Q  LDSGNIQ+ A+IF +M E C+PNL+T N+MLKAYLEH MF+EAKGLF 
Sbjct: 577  LVVTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFG 636

Query: 901  QMLENTNHLMSRKTDHKMRVIPDIYTFNTMLDACVAEKRWDYFDHVYQRMLCHGYHFNPK 1080
            +ML + NH+ S K+D+  RV+PDIYTFNTM+DAC AEKRW   ++VY+RML HG+HFN K
Sbjct: 637  KMLGDGNHI-SSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAK 695

Query: 1081 RHLRMILEALRAGKEEPLEITWKHLAATDRIPPVSLIKERFCMKLEKDDYVAALKCITNN 1260
            RHLR+IL+A RAGKEE LE TWK LA   R+PP  LIKERFCMKLEK D  AA+  IT +
Sbjct: 696  RHLRIILDASRAGKEELLETTWKSLAGEGRVPP-PLIKERFCMKLEKGDCAAAVSSITGH 754

Query: 1261 PPKDMQ-PFSKSSWLNLFQENSQRFQKDTLVRLMDAASNIVXXXXXXXXTLVCLVQSCKE 1437
               ++Q PFSK +WLNLF EN+ RFQ ++LV LM  AS  +         L  L+ SCKE
Sbjct: 755  HMNELQEPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARADMPNPVLQNLLASCKE 814

Query: 1438 FCFATDLSAADMDSENNNNVFALVGKQEVA 1527
            F   T ++ + + S+++    A   + EVA
Sbjct: 815  F-LRTHMTVSSVSSDSSRTETATAIQSEVA 843


>emb|CBI31083.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  699 bits (1804), Expect = 0.0
 Identities = 349/495 (70%), Positives = 406/495 (82%), Gaps = 1/495 (0%)
 Frame = +1

Query: 1    VIEWLQRCERFKSHKLRHIYTAALDALGKLRRPVEALNVFHAMQQQMSSYPDLVAYHSIA 180
            V+EWLQ  ERFKSHKLR+IYTAALD LGK RRPVEALNVF+AM QQMSSYPDLVAYH IA
Sbjct: 61   VLEWLQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIA 120

Query: 181  VTLGQAGHMKELFDVIDIMRSPPKKKFKAGIFENWDPRLEPDIIVYNAVLNACVKWKQWE 360
            VTLGQAGHMKELFDVID MRSPP+KKFK G  E WDPRLEPDI+VYNAVLNACV+ KQWE
Sbjct: 121  VTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWE 180

Query: 361  GAFWVLQQLKKQGIQPSAATYGLVMEVMFSCGKYNLVHEFFRKLQKSSIPNSLTYRVLVN 540
            GAFWVLQQLK+Q  +PS  TYGLVMEVMF CGKYNLVHEFF K+QKSSIPN+LTY+VLVN
Sbjct: 181  GAFWVLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVN 240

Query: 541  TFWKEGKTDEAISAVQEMERRGIVGSASLYYDLARCLCAAGRSREALMQIDKICKVANKP 720
            T W+EGKTDEA+ AVQ+ME+RG+VGSA+LYYDLARCLC+AGR +EALMQI+KICKVANKP
Sbjct: 241  TLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKVANKP 300

Query: 721  LVVTYTGLMQASLDSGNIQDGAYIFEKMKEICAPNLVTYNIMLKAYLEHGMFQEAKGLFE 900
            LVVTYTGL+Q  LDSGNIQ+ A+IF +M E C+PNL+T N+MLKAYLEH MF+EAKGLF 
Sbjct: 301  LVVTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFG 360

Query: 901  QMLENTNHLMSRKTDHKMRVIPDIYTFNTMLDACVAEKRWDYFDHVYQRMLCHGYHFNPK 1080
            +ML + NH+ S K+D+  RV+PDIYTFNTM+DAC AEKRW   ++VY+RML HG+HFN K
Sbjct: 361  KMLGDGNHI-SSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAK 419

Query: 1081 RHLRMILEALRAGKEEPLEITWKHLAATDRIPPVSLIKERFCMKLEKDDYVAALKCITNN 1260
            RHLR+IL+A RAGKEE LE TWK LA   R+PP  LIKERFCMKLEK D  AA+  IT +
Sbjct: 420  RHLRIILDASRAGKEELLETTWKSLAGEGRVPP-PLIKERFCMKLEKGDCAAAVSSITGH 478

Query: 1261 PPKDMQ-PFSKSSWLNLFQENSQRFQKDTLVRLMDAASNIVXXXXXXXXTLVCLVQSCKE 1437
               ++Q PFSK +WLNLF EN+ RFQ ++LV LM  AS  +         L  L+ SCKE
Sbjct: 479  HMNELQEPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARADMPNPVLQNLLASCKE 538

Query: 1438 FCFATDLSAADMDSE 1482
            F   T ++ + + S+
Sbjct: 539  F-LRTHMTVSSVSSD 552


>ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Cucumis sativus]
          Length = 902

 Score =  673 bits (1737), Expect = 0.0
 Identities = 330/490 (67%), Positives = 387/490 (78%)
 Frame = +1

Query: 1    VIEWLQRCERFKSHKLRHIYTAALDALGKLRRPVEALNVFHAMQQQMSSYPDLVAYHSIA 180
            +IEWLQ  ERFKSHKLR IYT ALD LGK RRPVEALNVFHAMQ+  SSYPDLVAYHSIA
Sbjct: 409  IIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIA 468

Query: 181  VTLGQAGHMKELFDVIDIMRSPPKKKFKAGIFENWDPRLEPDIIVYNAVLNACVKWKQWE 360
            VTLGQAG+M+ELFDVID MRSPPKKKFK G+ E WDPRL+PDI++YNAVLNACVK K  E
Sbjct: 469  VTLGQAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLE 528

Query: 361  GAFWVLQQLKKQGIQPSAATYGLVMEVMFSCGKYNLVHEFFRKLQKSSIPNSLTYRVLVN 540
            GAFWVLQ+LKKQ +QPS +TYGLVMEVM  CGKYNLVHEFFRK+QKSSIPN+LTY+VLVN
Sbjct: 529  GAFWVLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVN 588

Query: 541  TFWKEGKTDEAISAVQEMERRGIVGSASLYYDLARCLCAAGRSREALMQIDKICKVANKP 720
            T WKEGKTDEA+ A++ ME RGIVGSA+LYYD ARCLC+AGR +EALMQ++KICKVANKP
Sbjct: 589  TLWKEGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKP 648

Query: 721  LVVTYTGLMQASLDSGNIQDGAYIFEKMKEICAPNLVTYNIMLKAYLEHGMFQEAKGLFE 900
            LVVTYTGL+QA LDS ++Q   YIF  MK  C+PNLVTYNI+LK YLEHGMF+EA+ LF+
Sbjct: 649  LVVTYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQ 708

Query: 901  QMLENTNHLMSRKTDHKMRVIPDIYTFNTMLDACVAEKRWDYFDHVYQRMLCHGYHFNPK 1080
             + E   ++ S  +D++ RV+PDIY FNTMLDA  AEKRWD F + Y +M  +GYHFNPK
Sbjct: 709  NLSEQRRNI-STVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPK 767

Query: 1081 RHLRMILEALRAGKEEPLEITWKHLAATDRIPPVSLIKERFCMKLEKDDYVAALKCITNN 1260
            RHLRMILEA R GK+E LE TWKHLA  DR PP  L+KERFCMKL + DY  AL  I ++
Sbjct: 768  RHLRMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSH 827

Query: 1261 PPKDMQPFSKSSWLNLFQENSQRFQKDTLVRLMDAASNIVXXXXXXXXTLVCLVQSCKEF 1440
               D   FS+S+WLNL +E  +RF +DT++ L+     ++            L+ SCKEF
Sbjct: 828  NSGDAHHFSESAWLNLLKE--KRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEF 885

Query: 1441 CFATDLSAAD 1470
            C  T +S AD
Sbjct: 886  C-RTRISLAD 894