BLASTX nr result

ID: Glycyrrhiza24_contig00013558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013558
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX33301.1| putative endo-1,4-beta-xylanase [Populus tremula ...    62   6e-08
ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Gl...    58   9e-07
ref|XP_003549366.1| PREDICTED: endo-1,4-beta-xylanase A-like [Gl...    57   2e-06

>gb|AAX33301.1| putative endo-1,4-beta-xylanase [Populus tremula x Populus
           tremuloides]
          Length = 915

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/51 (56%), Positives = 33/51 (64%)
 Frame = +3

Query: 90  MENLQKVNAGNHSEIMKGNISGPSRSEATNIILNHDFSGGLNSWCLNCCNG 242
           ME  Q  N  +HSE +  N+   S S A NIILNHDFS GLNSW  NCC+G
Sbjct: 1   METQQNNNGNDHSETVSQNMIDSSNSNAPNIILNHDFSRGLNSWHPNCCDG 51


>ref|XP_003545364.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max]
          Length = 930

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +3

Query: 120 NHSEIMKGNISGPSRSEATNIILNHDFSGGLNSWCLNCCNG 242
           + S+IM G ISGPS SE  NI+LNHDFS  LNSW LN C G
Sbjct: 25  SRSQIMAGIISGPSGSEGVNILLNHDFSSELNSWHLNNCTG 65


>ref|XP_003549366.1| PREDICTED: endo-1,4-beta-xylanase A-like [Glycine max]
          Length = 902

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/36 (69%), Positives = 27/36 (75%)
 Frame = +3

Query: 135 MKGNISGPSRSEATNIILNHDFSGGLNSWCLNCCNG 242
           M GNISGPS S+  NI+LNHDFS GL SW LN C G
Sbjct: 1   MAGNISGPSGSKGANILLNHDFSSGLTSWHLNSCTG 36


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