BLASTX nr result

ID: Glycyrrhiza24_contig00013554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013554
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547347.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   122   4e-26
ref|XP_003534800.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   119   3e-25
ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252...   108   4e-22
emb|CBI25982.3| unnamed protein product [Vitis vinifera]              108   4e-22
ref|XP_002523015.1| dead box ATP-dependent RNA helicase, putativ...   108   4e-22

>ref|XP_003547347.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Glycine
           max]
          Length = 1188

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/63 (90%), Positives = 58/63 (92%), Gaps = 3/63 (4%)
 Frame = +1

Query: 190 MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEK---PAPSAP 360
           MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEK   P PS P
Sbjct: 1   MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPTPPVPSGP 60

Query: 361 APA 369
           AP+
Sbjct: 61  APS 63


>ref|XP_003534800.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Glycine
           max]
          Length = 936

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/57 (92%), Positives = 53/57 (92%)
 Frame = +1

Query: 190 MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPSAP 360
           MATAEAAS GLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKP P  P
Sbjct: 1   MATAEAASTGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPTPPVP 57


>ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252874 [Vitis vinifera]
          Length = 1165

 Score =  108 bits (271), Expect = 4e-22
 Identities = 50/66 (75%), Positives = 53/66 (80%), Gaps = 6/66 (9%)
 Frame = +1

Query: 190 MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPA------P 351
           MATAE A + LGPRYAPDDPTLP+PWKGLIDGSTGLLYYWNPETN+TQYEKP       P
Sbjct: 1   MATAEPAPSSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNITQYEKPTALPPPLP 60

Query: 352 SAPAPA 369
             P PA
Sbjct: 61  PGPPPA 66


>emb|CBI25982.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  108 bits (271), Expect = 4e-22
 Identities = 50/66 (75%), Positives = 53/66 (80%), Gaps = 6/66 (9%)
 Frame = +1

Query: 190 MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPA------P 351
           MATAE A + LGPRYAPDDPTLP+PWKGLIDGSTGLLYYWNPETN+TQYEKP       P
Sbjct: 1   MATAEPAPSSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNITQYEKPTALPPPLP 60

Query: 352 SAPAPA 369
             P PA
Sbjct: 61  PGPPPA 66


>ref|XP_002523015.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537737|gb|EEF39357.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 956

 Score =  108 bits (271), Expect = 4e-22
 Identities = 51/66 (77%), Positives = 54/66 (81%), Gaps = 7/66 (10%)
 Frame = +1

Query: 190 MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPA------- 348
           MATAE +SA LGPRYAP+DPTLP+PW GLIDGSTGLLYYWNPETNVTQYEKPA       
Sbjct: 1   MATAEPSSASLGPRYAPEDPTLPKPWMGLIDGSTGLLYYWNPETNVTQYEKPASVPPPLP 60

Query: 349 PSAPAP 366
           P AP P
Sbjct: 61  PGAPPP 66


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