BLASTX nr result

ID: Glycyrrhiza24_contig00013492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013492
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32689.3| unnamed protein product [Vitis vinifera]              273   3e-71
ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [V...   273   3e-71
ref|XP_002523902.1| 40S ribosomal protein S23, putative [Ricinus...   272   4e-71
emb|CBI16256.3| unnamed protein product [Vitis vinifera]              272   6e-71
ref|XP_002326333.1| predicted protein [Populus trichocarpa] gi|2...   271   8e-71

>emb|CBI32689.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  273 bits (697), Expect = 3e-71
 Identities = 141/164 (85%), Positives = 141/164 (85%)
 Frame = +3

Query: 153 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 332
           MGKTRGMGA RKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 48  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 107

Query: 333 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 512
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV   
Sbjct: 108 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV--- 164

Query: 513 VVKXXXXXXXXXXXXXXXXRFKVVKVSGVSLLALFKEKKEKPRS 644
                              RFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 165 -------------------RFKVVKVSGVSLLALFKEKKEKPRS 189


>ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [Vitis vinifera]
          Length = 142

 Score =  273 bits (697), Expect = 3e-71
 Identities = 141/164 (85%), Positives = 141/164 (85%)
 Frame = +3

Query: 153 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 332
           MGKTRGMGA RKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 333 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 512
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV   
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV--- 117

Query: 513 VVKXXXXXXXXXXXXXXXXRFKVVKVSGVSLLALFKEKKEKPRS 644
                              RFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 118 -------------------RFKVVKVSGVSLLALFKEKKEKPRS 142


>ref|XP_002523902.1| 40S ribosomal protein S23, putative [Ricinus communis]
           gi|255568414|ref|XP_002525181.1| 40S ribosomal protein
           S23, putative [Ricinus communis]
           gi|223535478|gb|EEF37147.1| 40S ribosomal protein S23,
           putative [Ricinus communis] gi|223536832|gb|EEF38471.1|
           40S ribosomal protein S23, putative [Ricinus communis]
          Length = 142

 Score =  272 bits (696), Expect = 4e-71
 Identities = 141/164 (85%), Positives = 142/164 (86%)
 Frame = +3

Query: 153 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 332
           MGKTRGMGAARKLKSHRRRQRWADKAYKKS+LGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 333 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 512
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV   
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV--- 117

Query: 513 VVKXXXXXXXXXXXXXXXXRFKVVKVSGVSLLALFKEKKEKPRS 644
                              RFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 118 -------------------RFKVVKVSGVSLLALFKEKKEKPRS 142


>emb|CBI16256.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  272 bits (695), Expect = 6e-71
 Identities = 142/170 (83%), Positives = 143/170 (84%)
 Frame = +3

Query: 135 FSPLATMGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 314
           F+  A MGKTRGMGA RKLKSHR RQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI
Sbjct: 28  FARPANMGKTRGMGAGRKLKSHRIRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKI 87

Query: 315 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 494
           GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI
Sbjct: 88  GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 147

Query: 495 PGVRFKVVKXXXXXXXXXXXXXXXXRFKVVKVSGVSLLALFKEKKEKPRS 644
           PGV                      RFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 148 PGV----------------------RFKVVKVSGVSLLALFKEKKEKPRS 175


>ref|XP_002326333.1| predicted protein [Populus trichocarpa]
           gi|224098071|ref|XP_002311115.1| predicted protein
           [Populus trichocarpa] gi|224112945|ref|XP_002316341.1|
           predicted protein [Populus trichocarpa]
           gi|224140159|ref|XP_002323452.1| predicted protein
           [Populus trichocarpa] gi|118483731|gb|ABK93759.1|
           unknown [Populus trichocarpa]
           gi|118484067|gb|ABK93919.1| unknown [Populus
           trichocarpa] gi|118487579|gb|ABK95615.1| unknown
           [Populus trichocarpa] gi|222833526|gb|EEE72003.1|
           predicted protein [Populus trichocarpa]
           gi|222850935|gb|EEE88482.1| predicted protein [Populus
           trichocarpa] gi|222865381|gb|EEF02512.1| predicted
           protein [Populus trichocarpa]
           gi|222868082|gb|EEF05213.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  271 bits (694), Expect = 8e-71
 Identities = 140/164 (85%), Positives = 141/164 (85%)
 Frame = +3

Query: 153 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 332
           MGKTRGMGA RKLKSHRRRQRWADK+YKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 333 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 512
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV   
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV--- 117

Query: 513 VVKXXXXXXXXXXXXXXXXRFKVVKVSGVSLLALFKEKKEKPRS 644
                              RFKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 118 -------------------RFKVVKVSGVSLLALFKEKKEKPRS 142


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