BLASTX nr result

ID: Glycyrrhiza24_contig00013475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013475
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531346.1| PREDICTED: tubulin-specific chaperone C-like...   318   1e-84
gb|ACU23700.1| unknown [Glycine max]                                  316   5e-84
ref|XP_003525053.1| PREDICTED: tubulin-specific chaperone C-like...   298   1e-78
ref|XP_002307082.1| tubulin folding cofactor [Populus trichocarp...   266   3e-69
ref|XP_002532835.1| tubulin folding cofactor C, putative [Ricinu...   260   3e-67

>ref|XP_003531346.1| PREDICTED: tubulin-specific chaperone C-like [Glycine max]
          Length = 336

 Score =  318 bits (815), Expect = 1e-84
 Identities = 170/264 (64%), Positives = 199/264 (75%)
 Frame = +1

Query: 73  EAEAAALQKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQ 252
           E E A  QKKHL+M+ERLSKR  +RS N +S+ S  ST S LSRF+ LKSSIESQL  SQ
Sbjct: 3   EEEEAEKQKKHLAMLERLSKRTQSRSQNPDSSSSESSTSSILSRFTHLKSSIESQLAQSQ 62

Query: 253 SLSSDPSQLKPHFRKISESISDLEKLVAESSYFLPPYDVRSSLKTVSDLKRNLEDLTSEL 432
           S+SSDPS LK HF +ISESISDLEK VAE+SY LP YDVR+SLKTVSDLK +L+DLTS+L
Sbjct: 63  SISSDPSNLKLHFNQISESISDLEKFVAENSYSLPSYDVRTSLKTVSDLKHSLDDLTSQL 122

Query: 433 IPXXXXXXXXXXXXXXQDRDTVIPEPKQRPIPDRDSFKPSFAARESPGFRNRTGEVLVGE 612
           +P              + +D+ IP P Q P           A R+SPGFRN+T E+L+ +
Sbjct: 123 LPKKKFSFKNKPTTKKEYKDSAIPLPTQPP-----QLSTRLAPRDSPGFRNKTAELLISD 177

Query: 613 FKESEVGEFTLSDLDSCEVRITGCVRALFVHRLKDCRVYVGAVTGSVLIEGVEGCVFVMA 792
           F+ SEVGEFT+SDLDSC+VRI G VRALFVHRLK+ RVYVG VTGSVLIE  EGCVFV+A
Sbjct: 178 FRGSEVGEFTVSDLDSCQVRIIGSVRALFVHRLKNSRVYVGPVTGSVLIEEAEGCVFVLA 237

Query: 793 AHQIRIHGARGCDFYLRVRSRPII 864
           +HQIRIHGA+  DFYLRVRSRPII
Sbjct: 238 SHQIRIHGAKRSDFYLRVRSRPII 261


>gb|ACU23700.1| unknown [Glycine max]
          Length = 337

 Score =  316 bits (809), Expect = 5e-84
 Identities = 169/264 (64%), Positives = 198/264 (75%)
 Frame = +1

Query: 73  EAEAAALQKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQ 252
           E E A  QKKHL+M+ERLSKR  +RS N +S+ S  ST S LSRF+ LKSSIESQL  SQ
Sbjct: 4   EEEEAEKQKKHLAMLERLSKRTQSRSQNPDSSSSESSTSSILSRFTHLKSSIESQLAQSQ 63

Query: 253 SLSSDPSQLKPHFRKISESISDLEKLVAESSYFLPPYDVRSSLKTVSDLKRNLEDLTSEL 432
           S+SSDPS LK HF +ISESISDLEK VAE+SY LP YDVR+SLKTVSDLK +L+DLTS+L
Sbjct: 64  SISSDPSNLKLHFNQISESISDLEKFVAENSYSLPSYDVRTSLKTVSDLKHSLDDLTSQL 123

Query: 433 IPXXXXXXXXXXXXXXQDRDTVIPEPKQRPIPDRDSFKPSFAARESPGFRNRTGEVLVGE 612
           +P              + +D+ IP P Q P           A R+SPGFRN+T E+L+ +
Sbjct: 124 LPKKKFSFKNKPTTKKEYKDSAIPLPTQPP-----QLSTRLAPRDSPGFRNKTAELLISD 178

Query: 613 FKESEVGEFTLSDLDSCEVRITGCVRALFVHRLKDCRVYVGAVTGSVLIEGVEGCVFVMA 792
           F+  EVGEFT+SDLDSC+VRI G VRALFVHRLK+ RVYVG VTGSVLIE  EGCVFV+A
Sbjct: 179 FRGPEVGEFTVSDLDSCQVRIIGSVRALFVHRLKNFRVYVGPVTGSVLIEEAEGCVFVLA 238

Query: 793 AHQIRIHGARGCDFYLRVRSRPII 864
           +HQIRIHGA+  DFYLRVRSRPII
Sbjct: 239 SHQIRIHGAKRSDFYLRVRSRPII 262


>ref|XP_003525053.1| PREDICTED: tubulin-specific chaperone C-like [Glycine max]
          Length = 329

 Score =  298 bits (762), Expect = 1e-78
 Identities = 164/262 (62%), Positives = 191/262 (72%), Gaps = 5/262 (1%)
 Frame = +1

Query: 94  QKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQSLSSDPS 273
           QKKHL+M+ERLSKR   RS N ES+       S LSRFS LK+SIESQL  SQS+SSDPS
Sbjct: 5   QKKHLAMLERLSKRTQIRSQNPESS-------SILSRFSHLKTSIESQLAQSQSISSDPS 57

Query: 274 QLKPHFRKISESISDLEKLVAESSYFLPPYDVRSSLKTVSDLKRNLEDLTSELIPXXXXX 453
            LK H  +IS+SISDLEKLVAE+SY LP YDVR+SLKTVSDLK +L+DLTS+L+P     
Sbjct: 58  NLKLHINQISQSISDLEKLVAENSYSLPSYDVRTSLKTVSDLKHSLDDLTSQLLPKKKFS 117

Query: 454 XXXXXXXXX-----QDRDTVIPEPKQRPIPDRDSFKPSFAARESPGFRNRTGEVLVGEFK 618
                         +D+D  IP PKQ P           A R+SPGFRN+TGE+L+ +F 
Sbjct: 118 FKNKPPTTTTKKDDKDKDCAIPLPKQPP-----QLSTLLAPRDSPGFRNKTGELLIADFS 172

Query: 619 ESEVGEFTLSDLDSCEVRITGCVRALFVHRLKDCRVYVGAVTGSVLIEGVEGCVFVMAAH 798
           +SEVGEFT+SDLDSC+VRI G VRALFVH LK+ RVYVG VTGSVLIE   GCVF +A+H
Sbjct: 173 DSEVGEFTVSDLDSCQVRIIGSVRALFVHGLKNSRVYVGPVTGSVLIEEAVGCVFALASH 232

Query: 799 QIRIHGARGCDFYLRVRSRPII 864
           QIRIHGA+  DFYLRVRSRPII
Sbjct: 233 QIRIHGAKRSDFYLRVRSRPII 254


>ref|XP_002307082.1| tubulin folding cofactor [Populus trichocarpa]
           gi|222856531|gb|EEE94078.1| tubulin folding cofactor
           [Populus trichocarpa]
          Length = 324

 Score =  266 bits (681), Expect = 3e-69
 Identities = 142/264 (53%), Positives = 187/264 (70%), Gaps = 4/264 (1%)
 Frame = +1

Query: 85  AALQKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQSLSS 264
           A LQKKH +M++RLS RH +R   + ++ +++ST SFLS F++ K SIESQL +S + + 
Sbjct: 6   ATLQKKHQAMLDRLSNRHQSRQKTATTSTTIDSTASFLSTFTESKRSIESQLNNSPN-TP 64

Query: 265 DPSQLKPHFRKISESISDLEKLVAESSYFLPPYDVRSSLKTVSDLKRNLEDLTSELIPXX 444
           DP+ LK H   IS SIS LEKLVAESSYFLP Y++RSSLK + +LK++LE+L S+L+P  
Sbjct: 65  DPTLLKSHLANISSSISSLEKLVAESSYFLPSYELRSSLKCIENLKQSLENLNSQLLPKK 124

Query: 445 XXXXXXXXXXXXQDRDTVIPEP---KQRPIPDRDSFKPSFAARESPGFRNRTGEVLVGEF 615
                       +++ T  P P      PIP   S  P  + R+SPG RN+  ++L  +F
Sbjct: 125 KFSF--------KNKSTSKPNPGNSNTNPIPPNPSHIPQ-SIRDSPGIRNKENQILSKKF 175

Query: 616 KE-SEVGEFTLSDLDSCEVRITGCVRALFVHRLKDCRVYVGAVTGSVLIEGVEGCVFVMA 792
           K   E+GEFTLSDLDSCEVR+ GC+ ALFV+RL++CRVY G V GS+L+E VE CVFV+A
Sbjct: 176 KNFKEIGEFTLSDLDSCEVRLIGCINALFVNRLRNCRVYTGPVIGSILLEEVENCVFVLA 235

Query: 793 AHQIRIHGARGCDFYLRVRSRPII 864
           +HQIRIH A+ CDFYLRVRSRPII
Sbjct: 236 SHQIRIHNAKSCDFYLRVRSRPII 259


>ref|XP_002532835.1| tubulin folding cofactor C, putative [Ricinus communis]
           gi|223527402|gb|EEF29542.1| tubulin folding cofactor C,
           putative [Ricinus communis]
          Length = 351

 Score =  260 bits (664), Expect = 3e-67
 Identities = 137/263 (52%), Positives = 182/263 (69%), Gaps = 3/263 (1%)
 Frame = +1

Query: 85  AALQKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQSLSS 264
           +AL KKH +M++RLS RH  R   S +  +  +T SFLS+F+  K SIESQL+HS +L++
Sbjct: 23  SALNKKHQAMLDRLSNRHQNRINKSTTATATAATASFLSKFTDAKQSIESQLSHSSTLAA 82

Query: 265 -DPSQLKPHFRKISESISDLEKLVAESSYFLPPYDVRSSLKTVSDLKRNLEDLTSELIPX 441
            DP+ LK H   IS SIS LE+L+AE+SY LP Y++RSSLKTVSDLK++L++L S+L+P 
Sbjct: 83  TDPTLLKSHLVNISASISSLEQLIAENSYLLPSYELRSSLKTVSDLKQSLDNLNSDLVPK 142

Query: 442 XXXXXXXXXXXXXQDRDTVIPEPKQRPIPDRDSFKPS--FAARESPGFRNRTGEVLVGEF 615
                            +   +PK       +  K +  F  R+SPG RN+  ++L   F
Sbjct: 143 KKFSFK---------NKSTSSKPKDTETAKTELAKQATTFIIRDSPGIRNKENDILTKNF 193

Query: 616 KESEVGEFTLSDLDSCEVRITGCVRALFVHRLKDCRVYVGAVTGSVLIEGVEGCVFVMAA 795
           K S++GEFTL +LDSCEVR+ GCV ALF++RLKDCRVY G VTGS+LI+ VE C+FV+A+
Sbjct: 194 KCSQIGEFTLENLDSCEVRLIGCVNALFINRLKDCRVYAGPVTGSILIDQVENCLFVLAS 253

Query: 796 HQIRIHGARGCDFYLRVRSRPII 864
           HQIRIH A+  DFYLRVRSRPII
Sbjct: 254 HQIRIHNAKVSDFYLRVRSRPII 276


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