BLASTX nr result

ID: Glycyrrhiza24_contig00013414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013414
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo...   223   3e-56
gb|ACU20255.1| unknown [Glycine max]                                  184   2e-44
ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]   179   7e-43
ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]   164   1e-38
ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula] g...   159   5e-37

>ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6,
           chloroplastic-like [Glycine max]
          Length = 952

 Score =  223 bits (569), Expect = 3e-56
 Identities = 129/209 (61%), Positives = 137/209 (65%), Gaps = 35/209 (16%)
 Frame = +2

Query: 233 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 412
           MATESPIRISEAG KWPSLKEAAT  SPS +MATEDL I L GHRFH SGKD  PNRSGS
Sbjct: 1   MATESPIRISEAGSKWPSLKEAATFGSPSRHMATEDLGIFLNGHRFHGSGKDAVPNRSGS 60

Query: 413 APPSMEGSFLATENLLSQKTTRNVSLVTLNRAMQK------------------------- 517
           APPSMEGSFLA ENLLSQ TTRN SL + NRAMQK                         
Sbjct: 61  APPSMEGSFLAIENLLSQNTTRNASLGSRNRAMQKCESEDQLLLYLAYLTCNVNLNAKYP 120

Query: 518 -------YDTGKDYLHLSRGTLAIPNGESEDDSPQQLYDNELDKTSGIWHRREQDAASMT 676
                   D+GK   HLS+GTLA    ESEDD  Q+LY+N LDK SG WHR  QDAAS +
Sbjct: 121 PPLVSWENDSGKGSFHLSQGTLATHKEESEDDLTQKLYNNLLDKASGKWHR--QDAASTS 178

Query: 677 SQHKN---EDLPHTTSPVYKKTLGVVDEL 754
           SQ  N   ED PH  SPVY K+LGVVDEL
Sbjct: 179 SQDTNLVLEDFPHIMSPVYNKSLGVVDEL 207


>gb|ACU20255.1| unknown [Glycine max]
          Length = 246

 Score =  184 bits (466), Expect = 2e-44
 Identities = 95/124 (76%), Positives = 100/124 (80%)
 Frame = +2

Query: 233 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 412
           MATESPIRISEAG KWPSLKEAAT  SPS +MATEDL I L GHRFH SGKD  PNRSGS
Sbjct: 1   MATESPIRISEAGSKWPSLKEAATFGSPSRHMATEDLGIFLNGHRFHGSGKDAVPNRSGS 60

Query: 413 APPSMEGSFLATENLLSQKTTRNVSLVTLNRAMQKYDTGKDYLHLSRGTLAIPNGESEDD 592
           APPSMEGSFLA ENLLSQ TTRN SL + NRAMQKYD+GK   HLS+GTLA    ESEDD
Sbjct: 61  APPSMEGSFLAIENLLSQNTTRNASLGSRNRAMQKYDSGKGSFHLSQGTLATHKEESEDD 120

Query: 593 SPQQ 604
             Q+
Sbjct: 121 LTQK 124


>ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
          Length = 982

 Score =  179 bits (453), Expect = 7e-43
 Identities = 115/232 (49%), Positives = 126/232 (54%), Gaps = 62/232 (26%)
 Frame = +2

Query: 233 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 412
           MATESPIRISEAGGKWPS KEAA   S S NMATEDL ILLKGHR+   GKDV PNRSGS
Sbjct: 1   MATESPIRISEAGGKWPSHKEAAAFGSLSRNMATEDLGILLKGHRYQGGGKDVAPNRSGS 60

Query: 413 APPSMEGSFLATENLLSQ-KTTRNVSLVTLNRAMQKYD---------------------- 523
           APPS+EGSFLA ENLL Q  TT+N S   L+ AMQ  +                      
Sbjct: 61  APPSIEGSFLAIENLLPQHNTTQNASFANLSSAMQNCESEEQLRADPAYLAYYNSNVNLN 120

Query: 524 -------TGKDYLHLSRGTLAIPNG--------------------------ESEDDSPQQ 604
                  T  +  HL R  ++  N                           ESEDDSPQQ
Sbjct: 121 PRLPPPLTSWENRHLGRHIISFRNNWRMSTTDDSGKSSLHLPQRTLSTHKEESEDDSPQQ 180

Query: 605 LYDNELDKTSGIWHRREQDAASMTSQHKN------EDLPHTTSPVYKKTLGV 742
            YD+EL K SGIW  R  DAAS+ SQHKN      ED P T SPVY K+L V
Sbjct: 181 PYDHELVKASGIW--RSPDAASLASQHKNMVDLIQEDFPRTMSPVYNKSLSV 230


>ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
          Length = 985

 Score =  164 bits (416), Expect = 1e-38
 Identities = 110/232 (47%), Positives = 119/232 (51%), Gaps = 62/232 (26%)
 Frame = +2

Query: 233 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 412
           MATES IRISEAGGKWPS KEAA   S S NMATEDL ILLKGHRF   GKD  PNRSGS
Sbjct: 1   MATESLIRISEAGGKWPSHKEAAAFGSSSRNMATEDLGILLKGHRFQGGGKDAAPNRSGS 60

Query: 413 APPSMEGSFLATENLLSQ-KTTRNVSLVTLNRAMQKYD---------------------- 523
           APPS+EGSFLA ENLL Q  T +N S   L+   Q  +                      
Sbjct: 61  APPSIEGSFLAIENLLPQHNTAQNASFANLSSTTQNCESEEQLRADPAYLAYYNSNVNLN 120

Query: 524 -------TGKDYLHLSR--------------------------GTLAIPNGESEDDSPQQ 604
                  T  +  HL R                           TL+    ESEDDS QQ
Sbjct: 121 PRLSPPLTSWENRHLGRHIGSFRNNWRMSSADDSGKSSVHLTQRTLSTHKEESEDDSAQQ 180

Query: 605 LYDNELDKTSGIWHRREQDAASMTSQHKN------EDLPHTTSPVYKKTLGV 742
            YD+EL K SGIW  R  DA S+ SQHKN      ED P T SPVY K+L V
Sbjct: 181 PYDDELVKASGIW--RRPDATSLASQHKNMVDLIQEDFPRTMSPVYNKSLSV 230


>ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula]
           gi|355484026|gb|AES65229.1| Pumilio-like protein
           [Medicago truncatula]
          Length = 984

 Score =  159 bits (403), Expect = 5e-37
 Identities = 104/236 (44%), Positives = 125/236 (52%), Gaps = 62/236 (26%)
 Frame = +2

Query: 233 MATESPIRISEAGGKWPSLKEAATLRSPSCNMATEDLSILLKGHRFHRSGKDVEPNRSGS 412
           MATESPIRISEAGGKWPS  EA+   +P  NM  EDL +LLKGHRF  SGKD  P+RSGS
Sbjct: 1   MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS 60

Query: 413 APPSMEGSFLATENLLSQKTTRNVSLVTLNRAMQKYDTGKD------YL----------- 541
           APPSMEGSFLA ENLL  + T++ SL  L+RA++  ++ +       YL           
Sbjct: 61  APPSMEGSFLAIENLLPLQNTQDASLTGLSRAVKNCESEEQLRADPAYLAYYNSNVNLNP 120

Query: 542 -------------------------------HLSRGTLAIPNG-------ESEDDSP-QQ 604
                                          H S+ +L +P         ESEDDSP QQ
Sbjct: 121 RLPPPLTSWENRHTGHRVGSSGNNWGLSSIDHRSKSSLHLPQATLSTHKEESEDDSPQQQ 180

Query: 605 LYDNELDKTSGIWHRREQDAASMTSQHKN------EDLPHTTSPVYKKTLGVVDEL 754
            ++NEL  TSG+W  R QDAAS+  Q KN      ED P T SPVY  +L     L
Sbjct: 181 AHENELVNTSGVW--RRQDAASLAPQPKNMVDLIQEDFPRTMSPVYNMSLSASHRL 234


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