BLASTX nr result

ID: Glycyrrhiza24_contig00013399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013399
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [...    66   1e-18
ref|XP_003519490.1| PREDICTED: uncharacterized protein LOC100792...    85   5e-15
ref|XP_003545465.1| PREDICTED: uncharacterized protein LOC100783...    84   2e-14
ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258...    67   2e-09

>ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula]
           gi|355518467|gb|AET00091.1| Heterogeneous nuclear
           ribonucleoprotein D0 [Medicago truncatula]
          Length = 523

 Score = 66.2 bits (160), Expect(2) = 1e-18
 Identities = 32/41 (78%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
 Frame = -2

Query: 474 GNQAAMSYGNQQGMQPGYQNPQMGQSSGVRPHPG-AGAPYM 355
           GNQAAM YG Q G+QP YQNPQ+GQS GVRPHPG  GAPYM
Sbjct: 456 GNQAAMGYG-QPGLQPQYQNPQLGQSGGVRPHPGPGGAPYM 495



 Score = 51.6 bits (122), Expect(2) = 1e-18
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -1

Query: 349 LDTLIDASII*FWTPLILLKYQALFKCIF 263
           +DTLIDAS I FWT LILLKYQALFKCIF
Sbjct: 495 MDTLIDASNILFWTLLILLKYQALFKCIF 523


>ref|XP_003519490.1| PREDICTED: uncharacterized protein LOC100792637 [Glycine max]
          Length = 496

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = -2

Query: 471 NQAAMSYGNQQGMQPGYQNPQMGQSSGVRPHPGAGAPYMGH 349
           NQ AM YGNQ  MQPGYQNPQMGQSSGVRPHPGAGAPYMGH
Sbjct: 456 NQPAMGYGNQPAMQPGYQNPQMGQSSGVRPHPGAGAPYMGH 496


>ref|XP_003545465.1| PREDICTED: uncharacterized protein LOC100783742 [Glycine max]
          Length = 494

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/41 (87%), Positives = 36/41 (87%)
 Frame = -2

Query: 471 NQAAMSYGNQQGMQPGYQNPQMGQSSGVRPHPGAGAPYMGH 349
           NQ AM YGNQ  MQPGYQNPQMGQ SGVRPHPGAGAPYMGH
Sbjct: 454 NQPAMGYGNQPAMQPGYQNPQMGQGSGVRPHPGAGAPYMGH 494


>ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
           vinifera] gi|359479207|ref|XP_003632234.1| PREDICTED:
           uncharacterized protein LOC100258161 isoform 2 [Vitis
           vinifera] gi|147853236|emb|CAN80681.1| hypothetical
           protein VITISV_037734 [Vitis vinifera]
          Length = 478

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/42 (76%), Positives = 34/42 (80%)
 Frame = -2

Query: 474 GNQAAMSYGNQQGMQPGYQNPQMGQSSGVRPHPGAGAPYMGH 349
           GNQ A SYG+Q GMQ GYQNPQMGQ+SG RP  G GAPYMGH
Sbjct: 438 GNQGAGSYGSQPGMQGGYQNPQMGQASGGRPQQG-GAPYMGH 478


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