BLASTX nr result

ID: Glycyrrhiza24_contig00013376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013376
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798...   281   2e-73
ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago ...   238   2e-60
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   226   1e-56
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-53
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   192   2e-46

>ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798730 [Glycine max]
          Length = 434

 Score =  281 bits (719), Expect = 2e-73
 Identities = 158/296 (53%), Positives = 200/296 (67%), Gaps = 5/296 (1%)
 Frame = +1

Query: 268  MHKNQLQEFAQKSNIALPMYQTVNEGHTHAPKFRATVWVDGMSYTSLLTFPQRRPAEQEA 447
            M+KN+LQEF  KS I  P+YQT+NEG  H+PKFR+TVWV  M YTS  TF  ++ AE EA
Sbjct: 1    MYKNRLQEFTSKSGINFPVYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEHEA 60

Query: 448  AKLALECLATKIREEGHSLVCEITTFCKAIMNEYAVKLSLPRPTFNTVPQE--GSIPGFI 621
            A+LALE +  + R+EG SLV +I+ F K+IMNEYA KL + +PT+NT  Q+  G +P FI
Sbjct: 61   ARLALESILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPIFI 120

Query: 622  SSLVFNGTSYTGDAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSKLYDAMKVQ 801
            +SLVFNGTSYTGD A++KK+AEQ AA+AAILS++G+S SG +L +IIKSKS  YDA+K +
Sbjct: 121  TSLVFNGTSYTGDPARTKKEAEQSAAKAAILSIMGDSSSGTVLVEIIKSKSIFYDAIKGK 180

Query: 802  G---LQPSGVSPVANTAHTSVMMDHKDKEVADPVGDNKNEDGTKVEFPESHGMLSPCQQA 972
            G    QPS V    N    S+ +DHKD EVA  V DN N + TKVEFPE   MLS CQ+ 
Sbjct: 181  GRSLSQPSAVLSTTNAGQISITLDHKDTEVAACVADNNNNE-TKVEFPEFPKMLSTCQEL 239

Query: 973  QVPKQESTLEATQSANESLQPGIEHPIVDGSSSXXXXXXXXXXXXXARMEAQLSAV 1140
            Q+  QES+LEA    N SLQPG EH I + S+S              R +  LS +
Sbjct: 240  QMIHQESSLEAN---NVSLQPGSEHSIDNDSTSKKRKKNKKKSNKKLRSQTPLSPI 292


>ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago truncatula]
            gi|355517709|gb|AES99332.1| hypothetical protein
            MTR_5g079490 [Medicago truncatula]
          Length = 357

 Score =  238 bits (608), Expect = 2e-60
 Identities = 143/337 (42%), Positives = 200/337 (59%), Gaps = 32/337 (9%)
 Frame = +1

Query: 226  SAGPAAQPSATQPVMHKNQLQEFAQKSNIALPMYQTVNEGHTHAPKFRATVWVDGMSYTS 405
            S  P   P      M KN L +FA KSN+  P + + NEG   AP +R++V VDG+ +TS
Sbjct: 13   SVSPELPPQLPPVPMFKNNLIQFALKSNMKHPEFFSRNEGSIQAPAYRSSVMVDGLVFTS 72

Query: 406  LLTFPQRRPAEQEAAKLALECLATKIREEGHSLVCEITTFCKAIMNEYAVKLSLPRPTFN 585
             LTF  R+ AEQE A+ ALE L  K+++E +S++ E  TFCK ++NEYA KLS+  PT+ 
Sbjct: 73   QLTFFHRKAAEQEVARFALEYLTKKVKDEAYSIMSEAVTFCKTVLNEYASKLSIQLPTYK 132

Query: 586  TVPQEGSIPGFISSLVFNGTSYTGDAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIK 765
            +V  +  IP F+ +L  NGTSYTGDAA+ KKDA +LAARAAILS+LGNS+SG++L QIIK
Sbjct: 133  SVEYKEVIPYFVCTLDLNGTSYTGDAARRKKDAVELAARAAILSILGNSNSGVLLAQIIK 192

Query: 766  SKSKLYDAMKVQGLQPSG----VSPVANTAHTSVMMD---HKDKEVADPVGDNKNED--- 915
            +K+KL+D+ K + LQP+     V P  ++  +S+++     KDK+VADP+ D+K +D   
Sbjct: 193  TKAKLFDSTKPKALQPTCDSVLVLPEESSERSSLLLQLFGAKDKDVADPLLDDKEKDKGV 252

Query: 916  -----GTK-----------------VEFPESHGMLSPCQQAQVPKQESTLEATQSANESL 1029
                 G K                 +  PES  ++S  QQ ++   E T EA +S+NE  
Sbjct: 253  ADPLFGAKGKVVTDPMGNDNINEIEMACPESGPIISTSQQPEMQTHEPTPEAAKSSNEPE 312

Query: 1030 QPGIEHPIVDGSSSXXXXXXXXXXXXXARMEAQLSAV 1140
            QP +  PI  G S              ARMEA+L A+
Sbjct: 313  QPSVALPIDTGVSVKRRRRLKYKANKKARMEAELKAL 349


>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
            vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
            product [Vitis vinifera]
          Length = 333

 Score =  226 bits (575), Expect = 1e-56
 Identities = 132/282 (46%), Positives = 178/282 (63%), Gaps = 12/282 (4%)
 Frame = +1

Query: 247  PSAT---QPVMHKNQLQEFAQKSNIALPMYQTVNEGHTHAPKFRATVWVDGMSYTSLLTF 417
            PS+T   + +MHKN+LQE+ Q+S I LP+YQTVNEG  HAPKFR+TV VDG +YTS  TF
Sbjct: 12   PSSTRLPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPNTF 71

Query: 418  PQRRPAEQEAAKLALECLATKIREEGHSLVCEITTFCKAIMNEYAVKLSLPRPTFNTVPQ 597
              R+ AEQ+ A+LALE ++ KI++EG  L+ E T FCK+I+NE+AVK++L +PT+ TV  
Sbjct: 72   SHRKAAEQDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQP 131

Query: 598  EGSIPGFISSLVFNGTSYTGDAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSK 777
            EG +P F+SSLVFNG +YTGDA ++KK+AEQLAAR  ILS+LGNS SG +L +IIKSK K
Sbjct: 132  EGLLPVFVSSLVFNGVTYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVK 191

Query: 778  LYDAM---KVQGLQPSGVSPVANTAHTSVMMDHKDKEVAD------PVGDNKNEDGTKVE 930
            LY A+   K      +G+ P+  T+        K+ EVA       P   +    G  V 
Sbjct: 192  LYAALHRVKDPSYIHTGILPIGLTSGIPPCKG-KEVEVAPGTDQLLPTAVSVPLSGQLVH 250

Query: 931  FPESHGMLSPCQQAQVPKQESTLEATQSANESLQPGIEHPIV 1056
             P +H    P  + + PK   + E        +    E P+V
Sbjct: 251  VPVTH---PPVHELEKPKPNVSSEVIAPPISFVPSVFEQPLV 289


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  214 bits (544), Expect = 4e-53
 Identities = 110/214 (51%), Positives = 151/214 (70%), Gaps = 4/214 (1%)
 Frame = +1

Query: 265 VMHKNQLQEFAQKSNIALPMYQTVNEGHTHAPKFRATVWVDGMSYTSLLTFPQRRPAEQE 444
           +M+KN+LQE+ QKS++ LP+YQT+NEG  H P+FR+TVWVDG  Y S  TF  R+ AEQ+
Sbjct: 138 LMYKNRLQEYTQKSSLQLPVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKAAEQD 197

Query: 445 AAKLALECLATKIREEGHSLVCEITTFCKAIMNEYAVKLSLPRPTFNTVPQEGSIPGFIS 624
            A LALE +  ++++EG  L+   T FCK+I+NE+AVK++  +PT+NTV   G +P FIS
Sbjct: 198 VANLALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVFIS 257

Query: 625 SLVFNGTSYTGDAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSKLYDAM---- 792
           +LVF+G SYTGDA ++KK+AEQLAARA ILSL+GNS S  +L++IIKSKSKLY A+    
Sbjct: 258 TLVFDGVSYTGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAALDRVK 317

Query: 793 KVQGLQPSGVSPVANTAHTSVMMDHKDKEVADPV 894
                QP+ V       H S     +++EV+  V
Sbjct: 318 DPSHSQPNIVPVAVKVGHCSETTVDQEQEVSTAV 351


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score =  192 bits (487), Expect = 2e-46
 Identities = 104/209 (49%), Positives = 137/209 (65%), Gaps = 5/209 (2%)
 Frame = +1

Query: 250 SATQPVMHKNQLQEFAQKSNIALPMYQTVNEGHTHAPKFRATVWVDGMSYTSLLTFPQRR 429
           +A + +M+KN+LQE+ Q+ ++ LP+YQTVNEG+ H PKFR+TV VDG  YTS  TF  R+
Sbjct: 7   AAPEHLMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRK 66

Query: 430 PAEQEAAKLALECLATKIREE--GHSLVCEITTFCKAIMNEYAVKLSLPRPTFNTVPQEG 603
            AEQ+ AKLAL  +  KI++E        E T  CK+I+NEYAVK+ L  PT+NTV Q G
Sbjct: 67  EAEQDVAKLALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGG 126

Query: 604 SIPGFISSLVFNGTSYTGDAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSKLY 783
             P F+SS VFNG +Y GD  ++KK+AEQLAARAA+LSLL N +SG ++ +  KSK KLY
Sbjct: 127 LFPIFVSSSVFNGVTYNGDIGRTKKEAEQLAARAAVLSLLRNVESGEIISKFFKSKRKLY 186

Query: 784 ---DAMKVQGLQPSGVSPVANTAHTSVMM 861
                   Q  Q S +  V     T  +M
Sbjct: 187 VGFHKSDSQDAQNSNMPVVGKDIKTEALM 215


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