BLASTX nr result

ID: Glycyrrhiza24_contig00013350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013350
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242477.1| uncharacterized protein LOC100808083 [Glycin...   149   8e-34
ref|NP_001235662.1| MYB transcription factor MYB56 [Glycine max]...   146   5e-33
gb|ACU23165.1| unknown [Glycine max]                                  142   5e-32
ref|XP_002513249.1| r2r3-myb transcription factor, putative [Ric...    67   3e-09
ref|XP_002325733.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07

>ref|NP_001242477.1| uncharacterized protein LOC100808083 [Glycine max]
           gi|255642080|gb|ACU21306.1| unknown [Glycine max]
          Length = 303

 Score =  149 bits (375), Expect = 8e-34
 Identities = 95/209 (45%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
 Frame = +2

Query: 2   HIKRKLYSRGIDPQTHRPLXXXXXXXXXXXXXXXXXXXXXXVSQITXXXXXXXXXXXXXX 181
           HIKRKLYSRGIDP+THRPL                       +                 
Sbjct: 111 HIKRKLYSRGIDPRTHRPLNASATPATT-------------ATATAVPSANSSKKINNNN 157

Query: 182 XXXXXXXXXXXGGFQLASGYA-----IGTDLVCEDSSNSSSGVTTEETYPHQQLNLDLSI 346
                       GFQL S  A     IGT+LV  + SNSSSGVTTEE+ PH QLNLDLSI
Sbjct: 158 NNIDNDINNNNNGFQLVSNSAYANAKIGTNLVAAEDSNSSSGVTTEESVPHHQLNLDLSI 217

Query: 347 GLPSLQPAQVSPVNPDKLKXXXXXXXXXXXPKVMYQWYGNVSSGQGVCLCYGLGFQSNQP 526
           GLPS QP Q S +NP+KLK           P+V+Y+WYGN++S QGVCLCY LG QSNQ 
Sbjct: 218 GLPS-QP-QGSSLNPEKLKPEPQEHDDQK-PQVLYKWYGNITSQQGVCLCYNLGLQSNQT 274

Query: 527 CCCKA---------------YRFYRPMNI 568
           C CK                YRFY PMNI
Sbjct: 275 CYCKTMGTATTTTTATDSNLYRFYTPMNI 303


>ref|NP_001235662.1| MYB transcription factor MYB56 [Glycine max]
           gi|110931656|gb|ABH02827.1| MYB transcription factor
           MYB56 [Glycine max]
          Length = 300

 Score =  146 bits (368), Expect = 5e-33
 Identities = 96/213 (45%), Positives = 107/213 (50%), Gaps = 24/213 (11%)
 Frame = +2

Query: 2   HIKRKLYSRGIDPQTHRPLXXXXXXXXXXXXXXXXXXXXXXVSQITXXXXXXXXXXXXXX 181
           HIKRKLYSRGIDPQTHRPL                       S                 
Sbjct: 110 HIKRKLYSRGIDPQTHRPLNA--------------------ASATPATTVTATAVPSSNS 149

Query: 182 XXXXXXXXXXXGGFQLA--SGYA---IGTDLVCEDSSNSSSGVTTEETYPHQQLNLDLSI 346
                       GFQL   S YA   IGTD++  + SNSSSGVTTEE++PH QLNLDLSI
Sbjct: 150 KKKIKNNNNNNNGFQLVNNSAYANTKIGTDMIAAEDSNSSSGVTTEESFPHHQLNLDLSI 209

Query: 347 GLPSLQPAQVSPVNPDKLKXXXXXXXXXXXPKVMYQWYG-NVSSGQGVCLCYGLGFQSNQ 523
           GLPS QP   S +NP+KLK           P+V+YQ YG N++  QGVCLCY LG QSNQ
Sbjct: 210 GLPS-QPQVSSSLNPEKLK-PEPQEHDDQKPQVLYQLYGKNITGQQGVCLCYNLGLQSNQ 267

Query: 524 PCCCKA------------------YRFYRPMNI 568
            C CK                   YRFYRPMNI
Sbjct: 268 ACYCKTMGTSTTTVTTTTATDRNLYRFYRPMNI 300


>gb|ACU23165.1| unknown [Glycine max]
          Length = 302

 Score =  142 bits (359), Expect = 5e-32
 Identities = 95/213 (44%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
 Frame = +2

Query: 2   HIKRKLYSRGIDPQTHRPLXXXXXXXXXXXXXXXXXXXXXXVSQITXXXXXXXXXXXXXX 181
           HIKRKLYSRGIDPQTHRPL                       + +T              
Sbjct: 111 HIKRKLYSRGIDPQTHRPLNAASATP---------------ATTVTATAVPSSNSKKKIK 155

Query: 182 XXXXXXXXXXXGGFQLA--SGYA---IGTDLVCEDSSNSSSGVTTEETYPHQQLNLDLSI 346
                       GFQL   S YA   IGTD++  + SNSSSGVTTEE++PH QLNLDLSI
Sbjct: 156 NNNNNNN----NGFQLVNNSAYANTKIGTDMIAAEDSNSSSGVTTEESFPHHQLNLDLSI 211

Query: 347 GLPSLQPAQVSPVNPDKLKXXXXXXXXXXXPKVMYQWYG-NVSSGQGVCLCYGLGFQSNQ 523
           GLPS QP     +NP+KLK           P+V+YQ YG N++  QGVCLCY LG QSNQ
Sbjct: 212 GLPS-QPQVFFSLNPEKLK-PEPQEHDDQKPQVLYQLYGKNITGQQGVCLCYNLGLQSNQ 269

Query: 524 PCCCKA------------------YRFYRPMNI 568
            C CK                   YRFYRPMNI
Sbjct: 270 ACYCKTMGTSTTTVTTTTATDRNLYRFYRPMNI 302


>ref|XP_002513249.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223547623|gb|EEF49117.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 269

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 40/97 (41%), Positives = 56/97 (57%)
 Frame = +2

Query: 245 IGTDLVCEDSSNSSSGVTTEETYPHQQLNLDLSIGLPSLQPAQVSPVNPDKLKXXXXXXX 424
           +GTD   EDS N SSGVT EE YP  ++NL+LSIGLP  Q  Q+S ++  + K       
Sbjct: 167 VGTDTSAEDS-NCSSGVTMEEAYP--KINLELSIGLPHHQSPQISSISFTEQKQRNQQHQ 223

Query: 425 XXXXPKVMYQWYGNVSSGQGVCLCYGLGFQSNQPCCC 535
                  ++ +  + SS + +CLC  LGFQ+N+ C C
Sbjct: 224 HQ-----LFAYLFSGSSTKSICLCCSLGFQNNKICSC 255


>ref|XP_002325733.1| predicted protein [Populus trichocarpa] gi|222862608|gb|EEF00115.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 49/121 (40%), Positives = 62/121 (51%), Gaps = 22/121 (18%)
 Frame = +2

Query: 269 DSSNSSSGVTTE-ETYPHQQLNLDLSIGLPSLQPAQVSPVNPDKLKXXXXXXXXXXXPKV 445
           + SNSSSGVT E E +P+ +LNL+LSIGLP    +Q+S VN   L              V
Sbjct: 201 EDSNSSSGVTAELEVHPNHKLNLELSIGLPC--QSQLSSVN--DLNDSKQANQQHQEQVV 256

Query: 446 MYQWYGN----VSSGQGV-----CLC-YGLGFQSNQPC-CCKA----------YRFYRPM 562
            YQ +G      SS   V     CLC Y  GF+++Q C CC A          YRFYRP+
Sbjct: 257 TYQLFGTPATPTSSAPAVVHRTACLCSYNRGFKNSQACSCCNAVEKFVTADSLYRFYRPL 316

Query: 563 N 565
           +
Sbjct: 317 D 317


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