BLASTX nr result

ID: Glycyrrhiza24_contig00013341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013341
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...   529   e-148
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...   528   e-147
ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform ...   514   e-143
ref|XP_003519157.1| PREDICTED: F-box protein SKIP1-like isoform ...   491   e-136
gb|ACU18806.1| unknown [Glycine max]                                  488   e-135

>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi|355511349|gb|AES92491.1|
            F-box protein SKIP1 [Medicago truncatula]
          Length = 302

 Score =  529 bits (1363), Expect = e-148
 Identities = 246/287 (85%), Positives = 271/287 (94%)
 Frame = +3

Query: 216  CLINILSRLSLEDRWRGAMLVCKSWFSAFKEEPSLHTVFNLDPYFDSPTESPRWWSPDFE 395
            CLINILSRLS ED+WRG++LVCKSWF+AFKEEPSLH+VFNLDPYFD P ESPRWW+  FE
Sbjct: 16   CLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFDKPLESPRWWTLQFE 75

Query: 396  TKIDSMLQYVVQWTHVFLTQIRLRHCSDRSLALVAQRCPNLEVLSIRSCPRVTDASISRI 575
            ++IDSML+ +VQWTH+FLTQIR+RHCSDRSLALVAQRCPNLEVLSIRSCPRVTD S+S+I
Sbjct: 76   SQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLEVLSIRSCPRVTDDSMSKI 135

Query: 576  AFSCPKLRELDISYCYDITHESLVLIGRNCPNLKILKRNLMNWLDPSQHLGIVPNEYLNA 755
            A  CP LRELDISYCY+ITHESLVLIGRNC N+K+LKRNLMNWLDPSQH+GIVP++YLNA
Sbjct: 136  ATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPSQHVGIVPDDYLNA 195

Query: 756  CPQDGESEAAAIANSMPQLEWLEIRFSKLSARGLNLICQGCPNLEFLDLSGCANLTGRDI 935
            CPQDG+SEAAAIANSMP LE LEIRFSKL+A+GLN ICQGCPNLEFLDLSGCANLT RDI
Sbjct: 196  CPQDGDSEAAAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFLDLSGCANLTSRDI 255

Query: 936  ANASSSLAHLKDIKKPNFYIPRSVFHTERYGHWNLYDERFQTDVFRI 1076
            A ASSSL+HLKDIKKPNFYIPRSVFHTERYGHW+LYDERFQTDVFRI
Sbjct: 256  AKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQTDVFRI 302


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
            [Medicago truncatula]
          Length = 302

 Score =  528 bits (1359), Expect = e-147
 Identities = 245/287 (85%), Positives = 270/287 (94%)
 Frame = +3

Query: 216  CLINILSRLSLEDRWRGAMLVCKSWFSAFKEEPSLHTVFNLDPYFDSPTESPRWWSPDFE 395
            CLINILSRLS ED+WRG++LVCKSWF+AFKEEPSLH+VFNLDPYFD P ESPRWW+  FE
Sbjct: 16   CLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFDKPLESPRWWTLQFE 75

Query: 396  TKIDSMLQYVVQWTHVFLTQIRLRHCSDRSLALVAQRCPNLEVLSIRSCPRVTDASISRI 575
            ++IDSML+ +VQWTH+FLTQIR+RHCSDRSLALVAQRCPNLEVLSIRSCPRVTD S+S+I
Sbjct: 76   SQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLEVLSIRSCPRVTDDSMSKI 135

Query: 576  AFSCPKLRELDISYCYDITHESLVLIGRNCPNLKILKRNLMNWLDPSQHLGIVPNEYLNA 755
            A  CP LRELDISYCY+ITHESLVLIGRNC N+K+LKRNLMNWLDPSQH+GIVP++YLNA
Sbjct: 136  ATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPSQHVGIVPDDYLNA 195

Query: 756  CPQDGESEAAAIANSMPQLEWLEIRFSKLSARGLNLICQGCPNLEFLDLSGCANLTGRDI 935
            CPQDG+SEA AIANSMP LE LEIRFSKL+A+GLN ICQGCPNLEFLDLSGCANLT RDI
Sbjct: 196  CPQDGDSEAVAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFLDLSGCANLTSRDI 255

Query: 936  ANASSSLAHLKDIKKPNFYIPRSVFHTERYGHWNLYDERFQTDVFRI 1076
            A ASSSL+HLKDIKKPNFYIPRSVFHTERYGHW+LYDERFQTDVFRI
Sbjct: 256  AKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQTDVFRI 302


>ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform 1 [Glycine max]
          Length = 306

 Score =  514 bits (1324), Expect = e-143
 Identities = 245/287 (85%), Positives = 263/287 (91%)
 Frame = +3

Query: 216  CLINILSRLSLEDRWRGAMLVCKSWFSAFKEEPSLHTVFNLDPYFDSPTESPRWWSPDFE 395
            CLINILSRLS+EDRWRG MLVCKSWFS FKE PSLH VFNLDP FDSPTES RWW+P+FE
Sbjct: 21   CLINILSRLSVEDRWRGTMLVCKSWFSVFKE-PSLHFVFNLDPQFDSPTESTRWWTPEFE 79

Query: 396  TKIDSMLQYVVQWTHVFLTQIRLRHCSDRSLALVAQRCPNLEVLSIRSCPRVTDASISRI 575
             KID+ML+ VV+W    LT IR+RHCSDRSLALVAQ CPNLEVL IRSCPRVTD SISRI
Sbjct: 80   AKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQSCPNLEVLFIRSCPRVTDDSISRI 139

Query: 576  AFSCPKLRELDISYCYDITHESLVLIGRNCPNLKILKRNLMNWLDPSQHLGIVPNEYLNA 755
            A SCPKLRELDISYCY+ITHESLVLIGRNCPNLK+LKRNLMNWLDPSQH GIVP++YLNA
Sbjct: 140  ALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLKRNLMNWLDPSQHRGIVPDDYLNA 199

Query: 756  CPQDGESEAAAIANSMPQLEWLEIRFSKLSARGLNLICQGCPNLEFLDLSGCANLTGRDI 935
            CPQDG+ EAAAIANSMP LE LEIRFSKL+A+GLN ICQGCPNLEFLDLSGCANLT RDI
Sbjct: 200  CPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPNLEFLDLSGCANLTSRDI 259

Query: 936  ANASSSLAHLKDIKKPNFYIPRSVFHTERYGHWNLYDERFQTDVFRI 1076
            ANASSSL HLK+IKKPNFYIPRSVFHTERYGHW+LYDERFQTD+F+I
Sbjct: 260  ANASSSLVHLKEIKKPNFYIPRSVFHTERYGHWSLYDERFQTDIFQI 306


>ref|XP_003519157.1| PREDICTED: F-box protein SKIP1-like isoform 2 [Glycine max]
          Length = 296

 Score =  491 bits (1263), Expect = e-136
 Identities = 237/287 (82%), Positives = 255/287 (88%)
 Frame = +3

Query: 216  CLINILSRLSLEDRWRGAMLVCKSWFSAFKEEPSLHTVFNLDPYFDSPTESPRWWSPDFE 395
            CLINILSRLS+EDRWRG MLVCKSWFS FKE PSLH VFNLDP FDSPTES RWW+P+FE
Sbjct: 21   CLINILSRLSVEDRWRGTMLVCKSWFSVFKE-PSLHFVFNLDPQFDSPTESTRWWTPEFE 79

Query: 396  TKIDSMLQYVVQWTHVFLTQIRLRHCSDRSLALVAQRCPNLEVLSIRSCPRVTDASISRI 575
             KID+ML+ VV+W    LT IR+RHCSDRSLALVAQR          SCPRVTD SISRI
Sbjct: 80   AKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQR----------SCPRVTDDSISRI 129

Query: 576  AFSCPKLRELDISYCYDITHESLVLIGRNCPNLKILKRNLMNWLDPSQHLGIVPNEYLNA 755
            A SCPKLRELDISYCY+ITHESLVLIGRNCPNLK+LKRNLMNWLDPSQH GIVP++YLNA
Sbjct: 130  ALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLKRNLMNWLDPSQHRGIVPDDYLNA 189

Query: 756  CPQDGESEAAAIANSMPQLEWLEIRFSKLSARGLNLICQGCPNLEFLDLSGCANLTGRDI 935
            CPQDG+ EAAAIANSMP LE LEIRFSKL+A+GLN ICQGCPNLEFLDLSGCANLT RDI
Sbjct: 190  CPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPNLEFLDLSGCANLTSRDI 249

Query: 936  ANASSSLAHLKDIKKPNFYIPRSVFHTERYGHWNLYDERFQTDVFRI 1076
            ANASSSL HLK+IKKPNFYIPRSVFHTERYGHW+LYDERFQTD+F+I
Sbjct: 250  ANASSSLVHLKEIKKPNFYIPRSVFHTERYGHWSLYDERFQTDIFQI 296


>gb|ACU18806.1| unknown [Glycine max]
          Length = 296

 Score =  488 bits (1255), Expect = e-135
 Identities = 235/287 (81%), Positives = 254/287 (88%)
 Frame = +3

Query: 216  CLINILSRLSLEDRWRGAMLVCKSWFSAFKEEPSLHTVFNLDPYFDSPTESPRWWSPDFE 395
            CLINIL RLS+EDRWRG MLVCKSWFS FKE PSLH VFNLDP FDSPTES RWW+P+FE
Sbjct: 21   CLINILPRLSVEDRWRGTMLVCKSWFSVFKE-PSLHFVFNLDPQFDSPTESTRWWTPEFE 79

Query: 396  TKIDSMLQYVVQWTHVFLTQIRLRHCSDRSLALVAQRCPNLEVLSIRSCPRVTDASISRI 575
             KID+ML+ VV+W    LT IR+RHCSDRSLALVAQR          SCPRVTD SISRI
Sbjct: 80   AKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQR----------SCPRVTDDSISRI 129

Query: 576  AFSCPKLRELDISYCYDITHESLVLIGRNCPNLKILKRNLMNWLDPSQHLGIVPNEYLNA 755
            A SCPKLRELDISYCY+ITHESLVLIGRNCPNL++LKRNLMNWLDPSQH GIVP++YLNA
Sbjct: 130  ALSCPKLRELDISYCYEITHESLVLIGRNCPNLRVLKRNLMNWLDPSQHRGIVPDDYLNA 189

Query: 756  CPQDGESEAAAIANSMPQLEWLEIRFSKLSARGLNLICQGCPNLEFLDLSGCANLTGRDI 935
            CPQDG+ EAAAIANSMP LE LEIRFSKL+A+GLN ICQGCPNLEFLDLSGCANLT RDI
Sbjct: 190  CPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPNLEFLDLSGCANLTSRDI 249

Query: 936  ANASSSLAHLKDIKKPNFYIPRSVFHTERYGHWNLYDERFQTDVFRI 1076
            ANASSSL HLK+IKKPNFYIPRSVFHTERYGHW+LYDERFQTD+F+I
Sbjct: 250  ANASSSLVHLKEIKKPNFYIPRSVFHTERYGHWSLYDERFQTDIFQI 296