BLASTX nr result

ID: Glycyrrhiza24_contig00013317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013317
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like ...   166   2e-39
ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like ...   160   1e-37
ref|XP_004172144.1| PREDICTED: condensin complex subunit 3-like ...   137   7e-31
ref|XP_004153102.1| PREDICTED: condensin complex subunit 3-like,...   137   7e-31
ref|XP_002868528.1| EMB2656 [Arabidopsis lyrata subsp. lyrata] g...   119   3e-25

>ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1033

 Score =  166 bits (420), Expect = 2e-39
 Identities = 97/156 (62%), Positives = 104/156 (66%)
 Frame = -1

Query: 468 KRLTQKIASILDDARTSHATHNRKLKELTLLRSKSPSPSHFFCAFSKALIPLFHFQRRLX 289
           KRL  KIA+ILD+ARTS+ATHNRKLKEL+LLRSKS S SHFF AFSK L PLF FQRRL 
Sbjct: 10  KRLMLKIAAILDEARTSYATHNRKLKELSLLRSKSSSHSHFFSAFSKTLTPLFDFQRRL- 68

Query: 288 XXXXXXXXXXXXXXXXXXXXXXXSDEFLDHXXXXXXXXXXXXXXXXXXXACQIVSEIILR 109
                                  SDEFLDH                   ACQIVSEIILR
Sbjct: 69  --ASADRVVFFVSAFAVATTAAASDEFLDHFLKFLLAAATASNKTARFRACQIVSEIILR 126

Query: 108 LPDDAEVTNDLWDEVIECMKVRVRDKIPVVRTFAVR 1
           LPDDAEV+N++WDEVIE MKVRVRDKIPVVRTFAVR
Sbjct: 127 LPDDAEVSNEIWDEVIEWMKVRVRDKIPVVRTFAVR 162


>ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1096

 Score =  160 bits (404), Expect = 1e-37
 Identities = 93/156 (59%), Positives = 102/156 (65%)
 Frame = -1

Query: 468 KRLTQKIASILDDARTSHATHNRKLKELTLLRSKSPSPSHFFCAFSKALIPLFHFQRRLX 289
           KRL  KIA+ILD+ARTS+ATHNRKLKEL+LLRSKS S SHFF  FSK + PLF FQRRL 
Sbjct: 75  KRLMLKIAAILDEARTSYATHNRKLKELSLLRSKSSSHSHFFSGFSKTITPLFDFQRRL- 133

Query: 288 XXXXXXXXXXXXXXXXXXXXXXXSDEFLDHXXXXXXXXXXXXXXXXXXXACQIVSEIILR 109
                                  S +FLDH                   ACQIVSEIILR
Sbjct: 134 ----ASADRIVSFVSAFAATAAASGDFLDHFLKFLLAAAAASNKTARFRACQIVSEIILR 189

Query: 108 LPDDAEVTNDLWDEVIECMKVRVRDKIPVVRTFAVR 1
           LPDDAEV+N++WDEVIE MKVRVRDKIPVVRTFAVR
Sbjct: 190 LPDDAEVSNEIWDEVIEWMKVRVRDKIPVVRTFAVR 225


>ref|XP_004172144.1| PREDICTED: condensin complex subunit 3-like [Cucumis sativus]
          Length = 271

 Score =  137 bits (346), Expect = 7e-31
 Identities = 77/154 (50%), Positives = 94/154 (61%)
 Frame = -1

Query: 462 LTQKIASILDDARTSHATHNRKLKELTLLRSKSPSPSHFFCAFSKALIPLFHFQRRLXXX 283
           L QKIA ILD+AR+S+ATHNRKLKEL  LR KS SP  F  AFSK L PLF+F RR+   
Sbjct: 22  LPQKIAKILDEARSSNATHNRKLKELCALRIKSKSPLDFLTAFSKTLTPLFNFHRRISSV 81

Query: 282 XXXXXXXXXXXXXXXXXXXXXSDEFLDHXXXXXXXXXXXXXXXXXXXACQIVSEIILRLP 103
                                +D+FL+                    ACQIVSEII+RLP
Sbjct: 82  ERLIRFISLFSTSRDPNFASHADDFLEEFLKFLLVASCAANKSARFRACQIVSEIIMRLP 141

Query: 102 DDAEVTNDLWDEVIECMKVRVRDKIPVVRTFAVR 1
           DDAEV+++ WD+VI+ MKVRV+DK+P+VR FAVR
Sbjct: 142 DDAEVSSEFWDKVIDHMKVRVQDKVPLVRMFAVR 175


>ref|XP_004153102.1| PREDICTED: condensin complex subunit 3-like, partial [Cucumis
           sativus]
          Length = 251

 Score =  137 bits (346), Expect = 7e-31
 Identities = 77/154 (50%), Positives = 94/154 (61%)
 Frame = -1

Query: 462 LTQKIASILDDARTSHATHNRKLKELTLLRSKSPSPSHFFCAFSKALIPLFHFQRRLXXX 283
           L QKIA ILD+AR+S+ATHNRKLKEL  LR KS SP  F  AFSK L PLF+F RR+   
Sbjct: 22  LPQKIAKILDEARSSNATHNRKLKELCALRLKSKSPLDFLTAFSKTLTPLFNFHRRISSV 81

Query: 282 XXXXXXXXXXXXXXXXXXXXXSDEFLDHXXXXXXXXXXXXXXXXXXXACQIVSEIILRLP 103
                                +D+FL+                    ACQIVSEII+RLP
Sbjct: 82  ERLIRFISLFSTSRDPNFASHADDFLEEFLKFLLVASCAANKSARFRACQIVSEIIMRLP 141

Query: 102 DDAEVTNDLWDEVIECMKVRVRDKIPVVRTFAVR 1
           DDAEV+++ WD+VI+ MKVRV+DK+P+VR FAVR
Sbjct: 142 DDAEVSSEFWDKVIDHMKVRVQDKVPLVRMFAVR 175


>ref|XP_002868528.1| EMB2656 [Arabidopsis lyrata subsp. lyrata]
           gi|297314364|gb|EFH44787.1| EMB2656 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1050

 Score =  119 bits (298), Expect = 3e-25
 Identities = 73/166 (43%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
 Frame = -1

Query: 468 KRLTQKIASILDDARTSHATHNRKLKELTLLRSK--------SPSPSHFFCAFSKALIPL 313
           + LTQKIA IL++ RTS+ATHNRKLKEL  +RSK        S S   F   F K L PL
Sbjct: 14  RNLTQKIAKILNETRTSYATHNRKLKELATIRSKLSSSESESSSSIRQFSSVFFKTLTPL 73

Query: 312 F--HFQRRLXXXXXXXXXXXXXXXXXXXXXXXXSDEFLDHXXXXXXXXXXXXXXXXXXXA 139
           F    +R                           DEFL+                    A
Sbjct: 74  FIAAQRRTAAAERVVRFAAEFACLRSNSDDDSDCDEFLEEFLRFLVVGSVAANRNARFRA 133

Query: 138 CQIVSEIILRLPDDAEVTNDLWDEVIECMKVRVRDKIPVVRTFAVR 1
           CQI+SEIILRLPD+ EV ++LWD+VI+CM +RVRDK+PV+RTFAVR
Sbjct: 134 CQIISEIILRLPDEVEVADELWDDVIDCMMLRVRDKVPVIRTFAVR 179


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