BLASTX nr result

ID: Glycyrrhiza24_contig00013301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013301
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43260.1| unknown [Lotus japonicus]                              118   6e-25
gb|AFK39548.1| unknown [Lotus japonicus]                               97   3e-18
ref|XP_002297974.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12
ref|XP_002509965.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002305415.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>gb|AFK43260.1| unknown [Lotus japonicus]
          Length = 136

 Score =  118 bits (296), Expect = 6e-25
 Identities = 64/137 (46%), Positives = 95/137 (69%), Gaps = 3/137 (2%)
 Frame = +2

Query: 35  MIGTMFSYLKGKSPHKRRVKVEQLKETKAV-YRDDLTKKQAPIISXXXXXXXXXXXFADS 211
           MI ++F+ L GK+ HK+  +V  LKET+AV YRD+LT+ +   +            FADS
Sbjct: 1   MIQSVFACLNGKASHKKAARVAPLKETEAVVYRDELTESKKQTLRKALVKKRVR--FADS 58

Query: 212 EPTILGSEDSCENEFDQKRSCVG--NEFGDKEGIRVKVKMTREEASRFLSRCNGGVLEFK 385
           EPTILG +  C  +   ++SC G  +EF +  G RVK++MT+EEA++FL+RCNGG+L+ K
Sbjct: 59  EPTILGED--CNEKSSVEKSCDGKNDEFRENAGFRVKLRMTKEEAAQFLARCNGGILDLK 116

Query: 386 DVARELVSIPVNRVTIL 436
           DVAREL ++P+NRV+++
Sbjct: 117 DVARELGAMPLNRVSVV 133


>gb|AFK39548.1| unknown [Lotus japonicus]
          Length = 127

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 65/135 (48%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
 Frame = +2

Query: 35  MIGTMFSYLKGKSPHKRRVKVEQLKETKAVYRDDLTKKQAPIISXXXXXXXXXXXFADSE 214
           MI  MF+ L  +     ++ VE LK+ + +YRD LT+K +P+ S           FADSE
Sbjct: 1   MILAMFACLISRKTSDEKL-VELLKDREEIYRDKLTEKISPLPSQAVKKSVR---FADSE 56

Query: 215 PTILGSEDSCENEFDQKRSCVGNEFGD-KEGIRVKVKMTREEASRFLSRCN-GGVLEFKD 388
             IL        E D K      E G+ K GIRVKVKMT+EEA+R LS+C  GG+LEFKD
Sbjct: 57  HAIL-------REKDDKDLVKSTESGEIKGGIRVKVKMTKEEAARLLSKCKEGGILEFKD 109

Query: 389 VARELVSIPVNRVTI 433
           VARELV IP+NRVT+
Sbjct: 110 VARELVDIPLNRVTV 124


>ref|XP_002297974.1| predicted protein [Populus trichocarpa] gi|222845232|gb|EEE82779.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
 Frame = +2

Query: 95  VEQLKETKAVYRDDLTKKQAPIISXXXXXXXXXXXFADSEPTILGSEDSCENEFDQKRSC 274
           + + K    +YRD+L KK +                       L S++  E +  +KR C
Sbjct: 20  IRRRKGANLIYRDELMKKTS------------VPKKIKKGGDCLASQEDNEKKKLEKRGC 67

Query: 275 VGNEFGDKEGIRVKVKMTREEASRFLSRC-NGGVLEFKDVARELVSIPVNRVTIL 436
            G+   +K  +RVKV+MT++EASR +S+C  GGVLEFKDVA EL  +PV+RV+++
Sbjct: 68  AGSAVEEKGVVRVKVRMTKQEASRLMSKCKEGGVLEFKDVAHELAQLPVDRVSVI 122


>ref|XP_002509965.1| conserved hypothetical protein [Ricinus communis]
           gi|223549864|gb|EEF51352.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
 Frame = +2

Query: 107 KETKAVYRDDLTKKQAPIISXXXXXXXXXXXFADSEPTILGSEDSCENEFDQKRSCVGNE 286
           K T  + RD+L+K  +               F  S    L +++   N    KRSC  + 
Sbjct: 20  KGTNFIQRDELSKNTSA-------KKVKKGDFLGSRELSLSTDEGDAN----KRSCGTSG 68

Query: 287 FGDKEGIRVKVKMTREEASRFLSRCN-GGVLEFKDVARELVSIPVNRVTI 433
             +K  IRVKVKMT++EA+R +S+C  GG+LEF+DVARELV IP+NRVT+
Sbjct: 69  VEEKGVIRVKVKMTKQEAARLMSKCKEGGILEFRDVARELVHIPLNRVTV 118


>ref|XP_002305415.1| predicted protein [Populus trichocarpa] gi|222848379|gb|EEE85926.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
 Frame = +2

Query: 113 TKAVYRDDLTKKQAPIISXXXXXXXXXXXFADSEPTILGSEDSCENEFDQKRSCVGNEFG 292
           T  +YRD+L+KK +P                      L S++  E +  +KR    +   
Sbjct: 26  TNLIYRDELSKKISP-------------KKIKKGGNCLASKEEDERKNFEKRG-YASSVQ 71

Query: 293 DKEGIRVKVKMTREEASRFLSRCN-GGVLEFKDVARELVSIPVNRVTIL 436
           +K+ IRVKV+MT+EEA+R +++C  GG+LEFKDVA ELV +PVNRVT++
Sbjct: 72  EKDVIRVKVRMTKEEAARLMAKCKEGGLLEFKDVAHELVQLPVNRVTVV 120


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