BLASTX nr result

ID: Glycyrrhiza24_contig00013298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013298
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-102
gb|ACU23441.1| unknown [Glycine max]                                  376   e-102
ref|XP_003542963.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   364   3e-98
emb|CBI30774.3| unnamed protein product [Vitis vinifera]              345   2e-92
ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|2...   337   4e-90

>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
            chloroplastic-like [Glycine max]
          Length = 288

 Score =  376 bits (965), Expect = e-102
 Identities = 184/209 (88%), Positives = 197/209 (94%)
 Frame = -1

Query: 1133 HHLWKRRDSAQSGQKALALVTTVCELPNEKEAVYRALDKWTAWETEFPLIAVAKALKILR 954
            HHLWK RDSAQSGQKALALV TV +LPNEKEAVY ALDKWTAWETEFP+IAV+KALKILR
Sbjct: 80   HHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILR 139

Query: 953  KRGQWVRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDQRVDEAESFWNMIVQAHTRSVSK 774
            KRG WVRVIQVAKWMLSKGQG TMGTYDTLLLAFDMD+RVDEAES WNMI+ AH RSVSK
Sbjct: 140  KRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSK 199

Query: 773  RLFSRMITLYDHHDMPDKIIEVFADMEELRVKPDEDTVRRVANAFRKLGQEEKRKLVIKR 594
            RLFSRMI+LYDHH+MPDKII+VFADMEELR+KPDEDTVRRVA AFR+LG EEKRKLVIK+
Sbjct: 200  RLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQ 259

Query: 593  YGLKWKYIHFNGERVRVRTEAWKEDDEST 507
            YGLKWKYIHFNGERVRVRTEAW ED++ST
Sbjct: 260  YGLKWKYIHFNGERVRVRTEAW-EDNKST 287


>gb|ACU23441.1| unknown [Glycine max]
          Length = 288

 Score =  376 bits (965), Expect = e-102
 Identities = 184/209 (88%), Positives = 197/209 (94%)
 Frame = -1

Query: 1133 HHLWKRRDSAQSGQKALALVTTVCELPNEKEAVYRALDKWTAWETEFPLIAVAKALKILR 954
            HHLWK RDSAQSGQKALALV TV +LPNEKEAVY ALDKWTAWETEFP+IAV+KALKILR
Sbjct: 80   HHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILR 139

Query: 953  KRGQWVRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDQRVDEAESFWNMIVQAHTRSVSK 774
            KRG WVRVIQVAKWMLSKGQG TMGTYDTLLLAFDMD+RVDEAES WNMI+ AH RSVSK
Sbjct: 140  KRGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHLRSVSK 199

Query: 773  RLFSRMITLYDHHDMPDKIIEVFADMEELRVKPDEDTVRRVANAFRKLGQEEKRKLVIKR 594
            RLFSRMI+LYDHH+MPDKII+VFADMEELR+KPDEDTVRRVA AFR+LG EEKRKLVIK+
Sbjct: 200  RLFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQ 259

Query: 593  YGLKWKYIHFNGERVRVRTEAWKEDDEST 507
            YGLKWKYIHFNGERVRVRTEAW ED++ST
Sbjct: 260  YGLKWKYIHFNGERVRVRTEAW-EDNKST 287


>ref|XP_003542963.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g18975, chloroplastic-like [Glycine max]
          Length = 289

 Score =  364 bits (934), Expect = 3e-98
 Identities = 181/209 (86%), Positives = 192/209 (91%)
 Frame = -1

Query: 1133 HHLWKRRDSAQSGQKALALVTTVCELPNEKEAVYRALDKWTAWETEFPLIAVAKALKILR 954
            HHLWK RDSAQSGQKALALV TV +LPNEKEAVY ALDKWTAWETEFP+IAV+KALKILR
Sbjct: 81   HHLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILR 140

Query: 953  KRGQWVRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDQRVDEAESFWNMIVQAHTRSVSK 774
            KRG WVR IQVAKWM+SKGQG TMGTYDTLLLAFDMD+RVD AES WNMI+ AH RSVSK
Sbjct: 141  KRGHWVRAIQVAKWMISKGQGATMGTYDTLLLAFDMDKRVDVAESSWNMIIHAHIRSVSK 200

Query: 773  RLFSRMITLYDHHDMPDKIIEVFADMEELRVKPDEDTVRRVANAFRKLGQEEKRKLVIKR 594
            RLFSRMI+L DHH+M DKIIEVFADMEELRVKPDEDTVRRVA AFR+LG+EEK KLVIKR
Sbjct: 201  RLFSRMISLXDHHNMLDKIIEVFADMEELRVKPDEDTVRRVARAFRELGEEEKWKLVIKR 260

Query: 593  YGLKWKYIHFNGERVRVRTEAWKEDDEST 507
            YGLKWKYIHFNGERV VRTEAW ED+EST
Sbjct: 261  YGLKWKYIHFNGERVXVRTEAW-EDNEST 288


>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  345 bits (884), Expect = 2e-92
 Identities = 167/204 (81%), Positives = 181/204 (88%)
 Frame = -1

Query: 1133 HHLWKRRDSAQSGQKALALVTTVCELPNEKEAVYRALDKWTAWETEFPLIAVAKALKILR 954
            HHLW++RDS  SGQKAL LV  V ELPNEKEAVY ALDKWTAWETEFPLIA AKAL+ILR
Sbjct: 72   HHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALRILR 131

Query: 953  KRGQWVRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDQRVDEAESFWNMIVQAHTRSVSK 774
            KR QW RVIQVAKWMLSKGQG TMGTYDTLLLAFDMD RVDEAES WNMI+  HTRS+SK
Sbjct: 132  KRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWRVDEAESLWNMILHTHTRSISK 191

Query: 773  RLFSRMITLYDHHDMPDKIIEVFADMEELRVKPDEDTVRRVANAFRKLGQEEKRKLVIKR 594
            +LFSRMI+LYDHHDM DK+IEVFADMEEL VKPDEDTVRRVA AF+ LGQE+K+KLV+K+
Sbjct: 192  QLFSRMISLYDHHDMRDKVIEVFADMEELGVKPDEDTVRRVACAFQTLGQEDKQKLVLKK 251

Query: 593  YGLKWKYIHFNGERVRVRTEAWKE 522
            Y  KWKYIHFNGERVRVR +AW E
Sbjct: 252  YQCKWKYIHFNGERVRVRRDAWDE 275


>ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|222859812|gb|EEE97359.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  337 bits (864), Expect = 4e-90
 Identities = 162/205 (79%), Positives = 181/205 (88%)
 Frame = -1

Query: 1133 HHLWKRRDSAQSGQKALALVTTVCELPNEKEAVYRALDKWTAWETEFPLIAVAKALKILR 954
            HHLW++RDSA SGQKAL LV  V ELPNEKEAVY ALDKWTAWETEFPLIA AKALKIL+
Sbjct: 68   HHLWQKRDSAGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALKILQ 127

Query: 953  KRGQWVRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDQRVDEAESFWNMIVQAHTRSVSK 774
            +R QW RVIQVAKWMLSKGQG T+GTYDTLLLAFD D RVDEA+S WNMI+  HTRS+SK
Sbjct: 128  QRRQWTRVIQVAKWMLSKGQGATLGTYDTLLLAFDKDDRVDEAKSLWNMIIHVHTRSMSK 187

Query: 773  RLFSRMITLYDHHDMPDKIIEVFADMEELRVKPDEDTVRRVANAFRKLGQEEKRKLVIKR 594
            RLFSRMI+LYDHH+M D+IIEVFADMEEL V+PDEDTV RVA AF+KLGQEEKR+LV++R
Sbjct: 188  RLFSRMISLYDHHNMQDEIIEVFADMEELGVRPDEDTVWRVARAFKKLGQEEKRELVLER 247

Query: 593  YGLKWKYIHFNGERVRVRTEAWKED 519
            Y  KWKYIHFNGERVRV+ + W E+
Sbjct: 248  YLCKWKYIHFNGERVRVKRDGWNEE 272


Top