BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013274
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   284   3e-74
ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-...   284   3e-74
ref|XP_002510553.1| zinc finger protein, putative [Ricinus commu...   229   1e-57
ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arab...   190   5e-46
ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis t...   187   4e-45

>ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform 1 [Glycine
           max] gi|356536437|ref|XP_003536744.1| PREDICTED: E3
           ubiquitin-protein ligase CIP8-like isoform 2 [Glycine
           max]
          Length = 333

 Score =  284 bits (727), Expect = 3e-74
 Identities = 165/271 (60%), Positives = 174/271 (64%), Gaps = 3/271 (1%)
 Frame = +1

Query: 10  NSNSDDPYFGSQFLQVLRLIAQXXXXXXXXXXXXXXXXXXXENDFLRIELGGWXXXXXXX 189
           +++SDDPYFGSQFLQVLRLIAQ                   ENDFLRIELGGW       
Sbjct: 64  SASSDDPYFGSQFLQVLRLIAQSARDDDASPPPPPSRSP--ENDFLRIELGGWDNDEEND 121

Query: 190 XXXXXXXXGVEFHNIGEEHEGAVEEQLDRSGNXXXXXXXXXXXXXXXXXXXXXXXXX-AT 366
                     EF    EEHE    E  DRSGN                          AT
Sbjct: 122 NDNNDDE---EF----EEHE----EAEDRSGNEDPHGRDDEDLRRRRRELLRLRIRDLAT 170

Query: 367 RTRSMRNRILDWAEILMGLEDNSIEFRLQVPESDRYVGNPEDYVDAAEYEALLQTLAESD 546
           RTRSMRNRILDWAEILMGLEDNSIEFRLQ+PESDRYVGNPEDYVDAAEYEALL TLAESD
Sbjct: 171 RTRSMRNRILDWAEILMGLEDNSIEFRLQLPESDRYVGNPEDYVDAAEYEALLHTLAESD 230

Query: 547 XXXXXXXXXXXXXXXVEALPTVKIVSE--AVVCAVCKDSVGVGEFAKRLPCGHEYHGDCI 720
                          VEALPTVKI SE  AV CA+CKD +GVG+ AKRLPCGH YHGDCI
Sbjct: 231 GGGRRGAPPASKAA-VEALPTVKIASESEAVACAICKDLLGVGDLAKRLPCGHGYHGDCI 289

Query: 721 VPWLSTRNSCPVCRFELPTDDKSYEEERFVN 813
           VPWLS+RNSCPVCR+ELPTDDK YEEER VN
Sbjct: 290 VPWLSSRNSCPVCRYELPTDDKEYEEERVVN 320


>ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Glycine max]
          Length = 337

 Score =  284 bits (726), Expect = 3e-74
 Identities = 162/270 (60%), Positives = 171/270 (63%), Gaps = 3/270 (1%)
 Frame = +1

Query: 10  NSNSDDPYFGSQFLQVLRLIAQXXXXXXXXXXXXXXXXXXXENDFLRIELGGWXXXXXXX 189
           +++SDDPYFGSQFLQVLRLIAQ                   ENDFLRIELGGW       
Sbjct: 60  SASSDDPYFGSQFLQVLRLIAQSARDDDASPPPPPSRSP--ENDFLRIELGGWDNDEENE 117

Query: 190 XXXXXXXXGVEFHNIGEEHEGAVEEQLDRSGNXXXXXXXXXXXXXXXXXXXXXXXXX-AT 366
                     E H          EE  DRSGN                          AT
Sbjct: 118 NDDDNGDEEFEEH----------EEAEDRSGNEDPHGGDDEDLRRRRRELLRLRIRDLAT 167

Query: 367 RTRSMRNRILDWAEILMGLEDNSIEFRLQVPESDRYVGNPEDYVDAAEYEALLQTLAESD 546
           RTRSMRNRILDWAEILMGLEDNSIEFRLQ+PESDRYVGNPEDYVDAAEYEALLQTLAESD
Sbjct: 168 RTRSMRNRILDWAEILMGLEDNSIEFRLQLPESDRYVGNPEDYVDAAEYEALLQTLAESD 227

Query: 547 XXXXXXXXXXXXXXXVEALPTVKIV--SEAVVCAVCKDSVGVGEFAKRLPCGHEYHGDCI 720
                          +EALPTVKI   SEAV CA+CKD +GVG+ AKRLPCGH YHGDCI
Sbjct: 228 -GGGRRGAPPASKAALEALPTVKIASESEAVACAICKDLLGVGDAAKRLPCGHRYHGDCI 286

Query: 721 VPWLSTRNSCPVCRFELPTDDKSYEEERFV 810
           VPWLS+RNSCPVCRFELPTDDK YEEER V
Sbjct: 287 VPWLSSRNSCPVCRFELPTDDKEYEEERVV 316


>ref|XP_002510553.1| zinc finger protein, putative [Ricinus communis]
           gi|223551254|gb|EEF52740.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 358

 Score =  229 bits (584), Expect = 1e-57
 Identities = 133/270 (49%), Positives = 150/270 (55%), Gaps = 2/270 (0%)
 Frame = +1

Query: 1   SNSNSNSDDPYFGSQFLQVLRLIAQXXXXXXXXXXXXXXXXXXXENDFLRIELGGWXXXX 180
           S ++  +DD  FGSQFLQ+LR+IAQ                   E+DFLRIEL GW    
Sbjct: 67  SLTSDQADDSTFGSQFLQMLRIIAQAAREEDTPPPLPQDPYS--EDDFLRIELNGWDNDE 124

Query: 181 XXXXXXXXXXXGVEFHNIGEEHEGAVEEQLDRSGNXXXXXXXXXXXXXXXXXXXXXXXXX 360
                        E +    EH+   +   + +                           
Sbjct: 125 DEEDDKDSNKNENEENRDEGEHDDGEDISDNETEEENREDEEEDMRRRRRDFLRLRIREF 184

Query: 361 ATRTRSMRNRILDWAEILMGLEDNSIEFRLQVPESDRYVGNPEDYVDAAEYEALLQTLAE 540
           ATR RS RNRILDWAEILMGLEDNSIEF L+VPE+DRY+GNPEDYVDAA YEALLQ LAE
Sbjct: 185 ATRARSGRNRILDWAEILMGLEDNSIEFLLEVPETDRYIGNPEDYVDAAGYEALLQNLAE 244

Query: 541 SDXXXXXXXXXXXXXXXVEALPTVKIVSE--AVVCAVCKDSVGVGEFAKRLPCGHEYHGD 714
           SD               V ALPT  I  E    VCA+CKD V VGE   +LPC H YHGD
Sbjct: 245 SD--DGRRGAPPASKSSVSALPTAVITLEEQTRVCAICKDMVNVGETETKLPCDHGYHGD 302

Query: 715 CIVPWLSTRNSCPVCRFELPTDDKSYEEER 804
           CIVPWL +RNSCPVCRFELPTDD  YEEER
Sbjct: 303 CIVPWLGSRNSCPVCRFELPTDDTEYEEER 332


>ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arabidopsis lyrata subsp.
           lyrata] gi|297312476|gb|EFH42900.1| hypothetical protein
           ARALYDRAFT_496711 [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  190 bits (483), Expect = 5e-46
 Identities = 116/267 (43%), Positives = 141/267 (52%), Gaps = 6/267 (2%)
 Frame = +1

Query: 22  DDPYFGSQFLQVLRLIAQXXXXXXXXXXXXXXXXXXXENDFLRIELGGWXXXXXXXXXXX 201
           +D   GS FLQ+LRL+A                    E+DF R+EL              
Sbjct: 69  EDSSIGSHFLQMLRLLAHAPSQRSPPRHLDVLSY---EDDFFRLELNS------------ 113

Query: 202 XXXXGVEFHNIGEEHEGAVEEQLDRSGNXXXXXXXXXXXXXXXXXXXXXXXXXATRTRSM 381
                 E   + +E +G  EE+ D   N                          TR+R+ 
Sbjct: 114 ----RTEIDEVEDEEDGDEEEEEDEEENLTVNDEEEEEDDLRRRNRFPLT---TTRSRTG 166

Query: 382 RNRILDWAEILMGLEDNSIEFRLQVPESDRYVGNPEDYVD-AAEYEALLQTLAESDXXXX 558
           RNRILDWAEILMG+EDNSIEFR+   ES+RY GNP DY+D +A YEALLQ LAE D    
Sbjct: 167 RNRILDWAEILMGIEDNSIEFRM---ESERYTGNPADYIDDSAGYEALLQNLAEGDGGGG 223

Query: 559 XXXXXXXXXXX-VEALPTVKIVSE----AVVCAVCKDSVGVGEFAKRLPCGHEYHGDCIV 723
                       +EAL T ++ S      +VCAVCKD + +GE  K+LPCGH YHGDCI+
Sbjct: 224 GRRGAPPAAKSAIEALETFQVTSSEGETVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIM 283

Query: 724 PWLSTRNSCPVCRFELPTDDKSYEEER 804
           PWL TRNSCPVCRF+L TDD  YEEER
Sbjct: 284 PWLGTRNSCPVCRFQLQTDDAEYEEER 310


>ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana]
           gi|61211690|sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3
           ubiquitin-protein ligase CIP8; AltName:
           Full=COP1-interacting protein 8
           gi|5929906|gb|AAD56636.1|AF162150_1 COP1-interacting
           protein CIP8 [Arabidopsis thaliana]
           gi|8843756|dbj|BAA97304.1| COP1-interacting protein CIP8
           [Arabidopsis thaliana] gi|19698865|gb|AAL91168.1|
           COP1-interacting protein CIP8 [Arabidopsis thaliana]
           gi|30984560|gb|AAP42743.1| At5g64920 [Arabidopsis
           thaliana] gi|111146876|gb|ABH07378.1| COP1-interacting
           protein 8 [Arabidopsis thaliana]
           gi|332010587|gb|AED97970.1| E3 ubiquitin-protein ligase
           CIP8 [Arabidopsis thaliana]
          Length = 334

 Score =  187 bits (475), Expect = 4e-45
 Identities = 119/270 (44%), Positives = 141/270 (52%), Gaps = 7/270 (2%)
 Frame = +1

Query: 16  NSDDPYFGSQFLQVLRLIAQXXXXXXXXXXXXXXXXXXXENDFLRIELGGWXXXXXXXXX 195
           N +D   GS FLQ+LRL+A                    E+DF R+EL            
Sbjct: 67  NVEDSSIGSHFLQMLRLLAHAPSQRSPPRHLDVLSY---EDDFFRLELNSRNEIDDDED- 122

Query: 196 XXXXXXGVEFHNIGEEHEGAVEEQLDRSGNXXXXXXXXXXXXXXXXXXXXXXXXXATRTR 375
                   E  + G+E E   EE L  +                            T++R
Sbjct: 123 --------EDEDDGDEEEEDEEENLTVNDEEDEEDDLRRRNRFPLT---------TTQSR 165

Query: 376 SMRNRILDWAEILMGLEDNSIEFRLQVPESDRYVGNPEDYVD-AAEYEALLQTLAESDXX 552
           + RNRILDWAEILMG+EDNSIEFR+   ESDRY GNP DY+D AA YEALLQ LAE D  
Sbjct: 166 TGRNRILDWAEILMGIEDNSIEFRM---ESDRYAGNPADYIDDAAGYEALLQNLAEGDGG 222

Query: 553 XXXXXXXXXXXXX--VEALPTVKIVSE----AVVCAVCKDSVGVGEFAKRLPCGHEYHGD 714
                          +EAL T ++ S      +VCAVCKD + +GE  K+LPCGH YHGD
Sbjct: 223 GGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGD 282

Query: 715 CIVPWLSTRNSCPVCRFELPTDDKSYEEER 804
           CIVPWL TRNSCPVCRF+L TDD  YEEER
Sbjct: 283 CIVPWLGTRNSCPVCRFQLETDDAEYEEER 312