BLASTX nr result

ID: Glycyrrhiza24_contig00013259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013259
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [C...   233   3e-59
emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]   228   9e-58
ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800...   226   3e-57
ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245...   225   6e-57
gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tub...   221   6e-56

>ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
           gi|449483270|ref|XP_004156540.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 1 [Cucumis sativus]
           gi|449483272|ref|XP_004156541.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  233 bits (593), Expect = 3e-59
 Identities = 122/176 (69%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
 Frame = -3

Query: 526 MGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEIKRVLESLYGFEVEKVR 347
           MGSRLGRRVVHFANLPIKLLMP SFTNI EIALKTIPSA+KIEIKRVLESLYGFEV+KV+
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 346 TLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIVEEDKRNLNKQSKSSVV 167
           TLNMEGKKKKRGG+L AKPDYKKAYVTLRNPLSI P++YPIRI+EEDKRN+NKQSKSS+V
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 166 EDEAQNNRTHWLDDNKE---KTQRSKSQNGYNXXXXXXXXXXXXXAKFPWTSMRPG 8
           E+     + HWL + +    KT +  +  G                KFPW+SMR G
Sbjct: 121 EE--GEAKKHWLHEKEPVGIKTYKGFADRG-RRRSGGGAETVEPSTKFPWSSMRSG 173


>emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
          Length = 480

 Score =  228 bits (580), Expect = 9e-58
 Identities = 120/190 (63%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
 Frame = -3

Query: 571 VVCE-REIEKC*ENRIMGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEI 395
           V C+ R+ +K  E   MGSRLGRRV++F NLPIKLLMP+SFTNI+EIALKT+PSA+KIEI
Sbjct: 294 VSCDLRDSQKQNEGSKMGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEI 353

Query: 394 KRVLESLYGFEVEKVRTLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIV 215
           KRVLESLYGFEVEKVRTLNMEGKKKKRGG+L AKPDYKKAY+TL+NPLSI P+LYPIR++
Sbjct: 354 KRVLESLYGFEVEKVRTLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLI 413

Query: 214 EEDKRNLNKQSKSSVVEDEAQNNRTHWL---DDNKEKTQRSKSQNGYNXXXXXXXXXXXX 44
           EE+K+N NKQSKSS+VE+     ++HWL   D ++ + ++S ++ G              
Sbjct: 414 EEEKKNTNKQSKSSIVEE--GEAKSHWLDGKDGDRFRPEKSSAERG----RGGRGGAAAA 467

Query: 43  XAKFPWTSMR 14
            AKFPW+ MR
Sbjct: 468 AAKFPWSGMR 477


>ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800404 [Glycine max]
          Length = 176

 Score =  226 bits (576), Expect = 3e-57
 Identities = 118/173 (68%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
 Frame = -3

Query: 526 MGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEIKRVLESLYGFEVEKVR 347
           MGSRLGRRVV FANLPIKLLMPNSFTNI EIALKTIPSATKIEIKRVL+SLYGF+V+KVR
Sbjct: 1   MGSRLGRRVVQFANLPIKLLMPNSFTNIHEIALKTIPSATKIEIKRVLQSLYGFDVDKVR 60

Query: 346 TLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIVEEDKRNLNKQSKSSVV 167
           TLNMEGKKKKRGG+L AKPDYKKAYVTL+ PLSI P+LYPIRI++EDK+ +NKQ+KSS+V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYVTLKTPLSISPDLYPIRIIDEDKKRINKQAKSSLV 120

Query: 166 EDEAQNNRT--HWLDDNKEKTQRSKSQNGYNXXXXXXXXXXXXXAKFPWTSMR 14
           +D   +     HWL D KE     + Q                 AKFPW+SMR
Sbjct: 121 QDHEAHTEAHHHWLHDRKEAQPPFRPQK----HGRLGRPEGASNAKFPWSSMR 169


>ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
           gi|296084744|emb|CBI25888.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  225 bits (573), Expect = 6e-57
 Identities = 115/174 (66%), Positives = 141/174 (81%), Gaps = 3/174 (1%)
 Frame = -3

Query: 526 MGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEIKRVLESLYGFEVEKVR 347
           MGSRLGRRV++F NLPIKLLMP+SFTNI+EIALKT+PSA+KIEIKRVLESLYGFEVEKVR
Sbjct: 1   MGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVR 60

Query: 346 TLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIVEEDKRNLNKQSKSSVV 167
           TLNMEGKKKKRGG+L AKPDYKKAY+TL+NPLSI P+LYPIR++EE+K+N NKQSKSS+V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSIV 120

Query: 166 EDEAQNNRTHWL---DDNKEKTQRSKSQNGYNXXXXXXXXXXXXXAKFPWTSMR 14
           E+     ++HWL   D ++ + ++S ++ G               AKFPW+ MR
Sbjct: 121 EE--GEAKSHWLDGKDGDRFRPEKSSAERG-----RGGRGGAAAAAKFPWSGMR 167


>gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tuberosum]
          Length = 188

 Score =  221 bits (564), Expect = 6e-56
 Identities = 115/184 (62%), Positives = 142/184 (77%), Gaps = 13/184 (7%)
 Frame = -3

Query: 526 MGSRLGRRVVHFANLPIKLLMPNSFTNIQEIALKTIPSATKIEIKRVLESLYGFEVEKVR 347
           MGSRLGRRVV+FANLPIKLLMP+SF+NI EI+LKTIPSA+KIEIKRVLESLYGFEVEKV+
Sbjct: 1   MGSRLGRRVVNFANLPIKLLMPSSFSNITEISLKTIPSASKIEIKRVLESLYGFEVEKVQ 60

Query: 346 TLNMEGKKKKRGGVLFAKPDYKKAYVTLRNPLSIDPNLYPIRIVEEDKRNLNKQSKSSVV 167
           TLNM+GKKKKRGG+L AKPDYKKAYVTLRNPLSI P+L+PI +++E+K+N++K+SKSS+V
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDLFPIGVIQEEKKNMSKKSKSSIV 120

Query: 166 EDEAQNNRTHWLDDNKEKTQRSKSQNGY-------------NXXXXXXXXXXXXXAKFPW 26
           ED+ +  + HWLD+ K+   RS+ + G                            AKFPW
Sbjct: 121 EDD-EPKKMHWLDEKKDGRNRSEMRFGRGRDHRSGQRSDVGRDRGGEHRDVGAAAAKFPW 179

Query: 25  TSMR 14
           +SMR
Sbjct: 180 SSMR 183


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