BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013256
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    76   4e-24
ref|XP_003612606.1| Replication protein A1-like protein [Medicag...    70   7e-16
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    86   7e-15
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    79   1e-12
gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]          49   3e-12

>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 76.3 bits (186), Expect(2) = 4e-24
 Identities = 34/98 (34%), Positives = 53/98 (54%)
 Frame = +2

Query: 413 QKGVAQSASCSRCGALEENLLHCVRDCTLSRQLWEKLGMGTANFFRSQDFFSWQKEVLAG 592
           ++ +A S +C+RCG  +E  LHCVRDC  SR +W+K+G    +FF +     W K  ++ 
Sbjct: 152 RRNIAPSPTCARCGEEDETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAHDWFKIGMSS 211

Query: 593 TEVARFYAGLWSLWCGGNAKCIGGEDVLLQKLLRLSIS 706
           +    F+ GLW  W   N  C+  E + L +L    +S
Sbjct: 212 SLPDIFFGGLWWAWRHRNLMCLNNETMSLFRLCNNIVS 249



 Score = 61.6 bits (148), Expect(2) = 4e-24
 Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = +3

Query: 240 KDLKYSAKSGFQWLLSKRGGGDLTKP---WSDLWKLQAPEKIRFFLWLAWHESIPTMQVL 410
           K+  YS KSGF WLL+ R       P   WS +W LQ PEK +F +WLA    +PT+ +L
Sbjct: 91  KNGTYSTKSGFHWLLTFRVPATDIIPHPSWSWIWNLQVPEKYKFLIWLACQNVVPTLSLL 150

Query: 411 HRR 419
           HRR
Sbjct: 151 HRR 153


>ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513941|gb|AES95564.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 708

 Score = 70.1 bits (170), Expect(2) = 7e-16
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +2

Query: 422 VAQSASCSRCGALEENLLHCVRDCTLSRQLWEKLGMGTANFFRS-QDFFSWQKEVLAGTE 598
           ++ S  C+RCG   E  LHCVRDC  S+ LW + G    +FF S +D   W K  + G+ 
Sbjct: 54  ISHSTVCNRCGIHNETFLHCVRDCIHSKPLWHQSGFTHPDFFFSNEDIIDWIKNGVMGSG 113

Query: 599 VARFYAGLWSLWCGGNAKCIGGED 670
              F + +WS W   N  C+G E+
Sbjct: 114 SFSFASTIWSTWRNRNMMCLGNEN 137



 Score = 40.0 bits (92), Expect(2) = 7e-16
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = +3

Query: 318 WSDLWKLQAPEKIRFFLWLAWHESIPTMQVLH 413
           W  +WKL+  EKI+F LWLA H S+ T+ +L+
Sbjct: 19  WIWIWKLKLLEKIKFILWLACHNSVHTISLLN 50


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
 Frame = +2

Query: 395 YDAGPT-----QKGVAQSASCSRCGALEENLLHCVRDCTLSRQLWEKLGMGTANFFRSQD 559
           +D+ PT      + +  SA+C+RCG  +E++ HC+RDC  S+ +W  +G     FF   D
Sbjct: 572 HDSLPTAALLHHRQIIASATCARCGVSDESVFHCIRDCPFSKIIWHHIGFSEPYFFAVTD 631

Query: 560 FFSWQKEVLAGTEVARFYAGLWSLWCGGNAKCIGGEDVLLQKL 688
              W K  L G++   F AGLW +W   NA+C+  E +LLQ+L
Sbjct: 632 IEIWCKSGLIGSKAILFAAGLWWIWRSRNARCMSEESMLLQRL 674



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/60 (50%), Positives = 40/60 (66%)
 Frame = +3

Query: 240 KDLKYSAKSGFQWLLSKRGGGDLTKPWSDLWKLQAPEKIRFFLWLAWHESIPTMQVLHRR 419
           K+  YSAKSG+QWLLS  G  + T  WS + K +  EK +F +WLA H+S+PT  +LH R
Sbjct: 525 KNGTYSAKSGYQWLLSLSGNDNNTHSWSWILKKKISEKYKFLIWLACHDSLPTAALLHHR 584


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
 Frame = +2

Query: 395  YDAGPT-----QKGVAQSASCSRCGALEENLLHCVRDCTLSRQLWEKLGMGTANFFRSQD 559
            ++A PT      + +A +A+CSRCG  +E+ LHCVRDC  S  +W KLG  TA FF    
Sbjct: 998  HNAAPTLSLLHHRKMAPAATCSRCGENDESFLHCVRDCKHSAAIWHKLGFVTAAFFSVSS 1057

Query: 560  FFSWQKEVLAGTEVARFYAGLWSLWCGGNAKCIGGEDVLLQKL-LRLSISWNKL 718
               W +   +G+    F AGLW  W   N  C+  E   L ++  R++ S N +
Sbjct: 1058 VQDWIRNFSSGSRAITFLAGLWWSWRHRNLMCLSNETWPLTRISFRINDSINAI 1111


>gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 673

 Score = 48.5 bits (114), Expect(3) = 3e-12
 Identities = 21/78 (26%), Positives = 42/78 (53%)
 Frame = +2

Query: 413 QKGVAQSASCSRCGALEENLLHCVRDCTLSRQLWEKLGMGTANFFRSQDFFSWQKEVLAG 592
           ++G++ S  C RC + +E+++HC+RDC  ++ +W++L +          F    +E    
Sbjct: 398 RRGMSSSDRCPRCLSSQESVIHCIRDCPKAQLVWQRLDIPCHPLDLKNWFLYHSRE---- 453

Query: 593 TEVARFYAGLWSLWCGGN 646
               +F++GLW +W   N
Sbjct: 454 -HPFKFFSGLWWIWRARN 470



 Score = 46.2 bits (108), Expect(3) = 3e-12
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +3

Query: 252 YSAKSGFQWLLSKRGGGDLTKPWSDLWKLQAPEKIRFFLWLAWHESIPTMQVLHRRGWPS 431
           Y +++G+ WL  +  G +  + W  LW    PEK +F  WL   E++PT     RRG  S
Sbjct: 344 YDSRNGYLWLCKQLFGWEERENWLWLWCQLVPEKHKFLAWLCLKEALPTASFRFRRGMSS 403



 Score = 22.3 bits (46), Expect(3) = 3e-12
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 95  ISTLTNDNQWQLNLLATPLPNHIRDTIQRSN 187
           I  + +  +W L+ L +PL  +++D I   N
Sbjct: 293 IQDIWSVGRWHLDTLYSPLSQNLKDNILSYN 323