BLASTX nr result

ID: Glycyrrhiza24_contig00013255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013255
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...   200   1e-49
ref|XP_003608221.1| F-box/LRR-repeat protein [Medicago truncatul...   197   1e-48
ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...   191   5e-47
ref|XP_003606071.1| F-box family protein [Medicago truncatula] g...   174   6e-42
ref|XP_003604538.1| F-box family-9 [Medicago truncatula] gi|3555...   174   1e-41

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
           gi|357476013|ref|XP_003608292.1| F-box family protein
           [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
           family protein [Medicago truncatula]
           gi|355509347|gb|AES90489.1| F-box family protein
           [Medicago truncatula]
          Length = 489

 Score =  200 bits (508), Expect = 1e-49
 Identities = 105/160 (65%), Positives = 125/160 (78%)
 Frame = +3

Query: 3   EPFSAFNSLNTLILQCCTVMGGQTLCISSATLVNLTMHINSSKFSKIELSAPSLCSFGLT 182
           EPFS FN LN+L++  CTV   Q LCI S TLVNLTM  +SS   KIELSAPSL +F  T
Sbjct: 201 EPFSGFNKLNSLVIDNCTVKDAQILCILSETLVNLTMRNHSSDVYKIELSAPSLSTFAFT 260

Query: 183 GTPCQKLCGSSLSSVKQVIIDAETFLNFEKPALVLLSWFVKLANIKSLTVSASTLLILSV 362
           GTP QKLCGS+LSSVKQV IDAE   N+ +P LVLLSW ++LANIKSLTVSASTL +LS+
Sbjct: 261 GTPYQKLCGSNLSSVKQVNIDAEMLSNYTEPPLVLLSWLLELANIKSLTVSASTLQVLSL 320

Query: 363 VPDVLKVKLPSLCDLKSLKIELNRLSFGSSKILRAAELQK 482
           +PD+LK KL SLC+LKSL+++L  LS+G S  LR A+LQK
Sbjct: 321 IPDLLKDKLTSLCNLKSLRVQLKPLSYGLSMTLRTAKLQK 360


>ref|XP_003608221.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509276|gb|AES90418.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 597

 Score =  197 bits (500), Expect = 1e-48
 Identities = 109/183 (59%), Positives = 136/183 (74%), Gaps = 2/183 (1%)
 Frame = +3

Query: 3   EPFSAFNSLNTLILQCCTVMGGQTLCISSATLVNLTMHINSSKFSKIELSAPSLCSFGLT 182
           +PFSAF  LN+L+L  C +   Q L ISS TLV+L MH NSS FS+IELS PSLC+F +T
Sbjct: 334 DPFSAFTKLNSLVLYGCKIEDAQILKISSETLVDLAMHHNSSNFSQIELSTPSLCTFTIT 393

Query: 183 GTPCQKLCGSSLSSVKQVIIDAETFLNFEKPALVLLSWFVKLANIKSLTVSASTLLILSV 362
           G P QK+CGS LSSVKQV IDA+   NFE+  +VLLSW + LAN+KSL VS+ TL ILS+
Sbjct: 394 GIPNQKICGSGLSSVKQVNIDAKMHSNFEESPMVLLSWLLDLANVKSLIVSSITLQILSL 453

Query: 363 VPDVLKVKLPSLCDLKSLKIELNRL--SFGSSKILRAAELQKAAAKSPKEDAKLGKAFKA 536
           VPD+L+V+L SLC+LKS++I+L  L    G  +++ A  L+K AAKS KE  KL KAFKA
Sbjct: 454 VPDILEVELHSLCNLKSMEIKLEPLQTQLGLPRVVNAM-LKKVAAKSSKEATKLQKAFKA 512

Query: 537 GLE 545
           GLE
Sbjct: 513 GLE 515


>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score =  191 bits (486), Expect = 5e-47
 Identities = 105/183 (57%), Positives = 131/183 (71%), Gaps = 2/183 (1%)
 Frame = +3

Query: 3   EPFSAFNSLNTLILQCCTVMGGQTLCISSATLVNLTMHINSSKFSKIELSAPSLCSFGLT 182
           EPF AF  L +L+++ C V   Q L ISS TLVN  M   S  F+KIEL APSLC+F  T
Sbjct: 210 EPFLAFPKLTSLVIRSCRVRDAQILRISSETLVNFKMRNYSEDFAKIELCAPSLCTFTFT 269

Query: 183 GTPCQKLCGSSLSSVKQVIIDAETFLNFEKPALVLLSWFVKLANIKSLTVSASTLLILSV 362
           GTP QK+CGS LSSVKQV I AE F  +++P L+L  W + LAN+KSL VS++TL ILS+
Sbjct: 270 GTPVQKICGSGLSSVKQVKIKAEMFSRWDEPPLILFDWLLNLANVKSLMVSSTTLRILSL 329

Query: 363 VPDVLKVKLPSLCDLKSLKIELNRLS--FGSSKILRAAELQKAAAKSPKEDAKLGKAFKA 536
           VPD+L+VKLPSLC+LKS++I+L   S       +++ A L+KAAAKS KE AKL KAFKA
Sbjct: 330 VPDLLEVKLPSLCNLKSMEIKLETCSNQMALPNLVKEAMLKKAAAKSRKEAAKLRKAFKA 389

Query: 537 GLE 545
            LE
Sbjct: 390 RLE 392


>ref|XP_003606071.1| F-box family protein [Medicago truncatula]
           gi|355507126|gb|AES88268.1| F-box family protein
           [Medicago truncatula]
          Length = 428

 Score =  174 bits (442), Expect = 6e-42
 Identities = 99/180 (55%), Positives = 124/180 (68%)
 Frame = +3

Query: 6   PFSAFNSLNTLILQCCTVMGGQTLCISSATLVNLTMHINSSKFSKIELSAPSLCSFGLTG 185
           PFS F  L +LI+  CTVM  Q + ISS TLVN  M  +S K +KIELS PSLC+F   G
Sbjct: 225 PFSGFAKLKSLIIHGCTVMDTQIITISSETLVNFAMLYSSPKIAKIELSTPSLCTFTFYG 284

Query: 186 TPCQKLCGSSLSSVKQVIIDAETFLNFEKPALVLLSWFVKLANIKSLTVSASTLLILSVV 365
            P  K+C S+LSSVK+V I A    + EK  +VL +W  +L  +KSL VS+ TL ILS+V
Sbjct: 285 IPHPKICRSNLSSVKEVKIYARMDTSLEKLPMVLFNWLQELLAVKSLKVSSITLQILSLV 344

Query: 366 PDVLKVKLPSLCDLKSLKIELNRLSFGSSKILRAAELQKAAAKSPKEDAKLGKAFKAGLE 545
           PD+L+VKLPSLC+LK ++I++  LSF  S IL+ A L KAAAKSP+E A L K F AGLE
Sbjct: 345 PDLLEVKLPSLCNLKLVEIKMQPLSFALSCILKDAMLMKAAAKSPEEAADLRKTFGAGLE 404


>ref|XP_003604538.1| F-box family-9 [Medicago truncatula] gi|355505593|gb|AES86735.1|
           F-box family-9 [Medicago truncatula]
          Length = 455

 Score =  174 bits (440), Expect = 1e-41
 Identities = 98/181 (54%), Positives = 126/181 (69%)
 Frame = +3

Query: 3   EPFSAFNSLNTLILQCCTVMGGQTLCISSATLVNLTMHINSSKFSKIELSAPSLCSFGLT 182
           EPFS FN LN+L++  C V GG+TL ISS TLVNLT++ + S + +I+L  PSL  F  T
Sbjct: 188 EPFSIFNRLNSLLMCNCVVRGGKTLRISSVTLVNLTIYHDRSIYYEIDLCTPSLWKFVFT 247

Query: 183 GTPCQKLCGSSLSSVKQVIIDAETFLNFEKPALVLLSWFVKLANIKSLTVSASTLLILSV 362
           GTP   L GSS+SS+K V IDAE   +   P + LLSW V  ANIKSLTV+A+TL +LS+
Sbjct: 248 GTPYLSLSGSSISSLKHVDIDAEVESSQRAPLVFLLSWLVVFANIKSLTVTATTLQVLSL 307

Query: 363 VPDVLKVKLPSLCDLKSLKIELNRLSFGSSKILRAAELQKAAAKSPKEDAKLGKAFKAGL 542
            PDVLK++LPSL +LKSLK+ +  L +G    LR  +LQ   AKS +E A++ KAFK GL
Sbjct: 308 YPDVLKIRLPSLHNLKSLKVRMEELLYGFRMTLRDIKLQN--AKSKREAARIRKAFKEGL 365

Query: 543 E 545
           E
Sbjct: 366 E 366


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