BLASTX nr result

ID: Glycyrrhiza24_contig00013228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013228
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80099.1| hypothetical protein VITISV_002699 [Vitis vinifera]    67   1e-09
ref|NP_194375.4| uncharacterized protein [Arabidopsis thaliana] ...    60   2e-07
emb|CAA18225.1| putative protein [Arabidopsis thaliana] gi|72694...    60   2e-07
ref|XP_002869610.1| hypothetical protein ARALYDRAFT_492167 [Arab...    59   3e-07
ref|XP_002300593.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>emb|CAN80099.1| hypothetical protein VITISV_002699 [Vitis vinifera]
          Length = 718

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 51/111 (45%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
 Frame = -1

Query: 321 HPRQYRHRGDVGVGFGRGHSNRRXXXXXXXXXXXXXXXGDIFMEAGRLAAEYLVSQGLLP 142
           H  +YR+      GFGRG S                  GDIFMEAGRLA EYL+S GLLP
Sbjct: 38  HNSEYRN---FNRGFGRGQSK-------PYQQPHXSRKGDIFMEAGRLATEYLISTGLLP 87

Query: 141 PNVLSLKWHNQNHNGGSFKKH----XXXXXXXXXXXGRTSALARLGSAVLD 1
           P+ L +KW N     GS KK                GRTSALARLG+AV D
Sbjct: 88  PSALPVKWQN-----GSLKKQVGDFQDGENLQLPAEGRTSALARLGNAVSD 133


>ref|NP_194375.4| uncharacterized protein [Arabidopsis thaliana]
           gi|257096929|sp|P0CB21.1|Y4645_ARATH RecName:
           Full=Uncharacterized protein At4g26450
           gi|332659800|gb|AEE85200.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 708

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
 Frame = -1

Query: 312 QYRHRG-DVGVGFGRGHS----NRRXXXXXXXXXXXXXXXGDIFMEAGRLAAEYLVSQGL 148
           +++HRG + G G GRG S    N+                GD+FMEAGRLA EYLVSQG+
Sbjct: 41  EHQHRGFNRGYGRGRGRSKSYHNQLPPPLPPPPVQRRSSGGDVFMEAGRLATEYLVSQGV 100

Query: 147 LPPNVLSLKWHNQN 106
           LP  VLS KW N N
Sbjct: 101 LPQTVLSSKWQNGN 114


>emb|CAA18225.1| putative protein [Arabidopsis thaliana] gi|7269497|emb|CAB79500.1|
           putative protein [Arabidopsis thaliana]
          Length = 1248

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
 Frame = -1

Query: 312 QYRHRG-DVGVGFGRGHS----NRRXXXXXXXXXXXXXXXGDIFMEAGRLAAEYLVSQGL 148
           +++HRG + G G GRG S    N+                GD+FMEAGRLA EYLVSQG+
Sbjct: 41  EHQHRGFNRGYGRGRGRSKSYHNQLPPPLPPPPVQRRSSGGDVFMEAGRLATEYLVSQGV 100

Query: 147 LPPNVLSLKWHNQN 106
           LP  VLS KW N N
Sbjct: 101 LPQTVLSSKWQNGN 114


>ref|XP_002869610.1| hypothetical protein ARALYDRAFT_492167 [Arabidopsis lyrata subsp.
           lyrata] gi|297315446|gb|EFH45869.1| hypothetical protein
           ARALYDRAFT_492167 [Arabidopsis lyrata subsp. lyrata]
          Length = 1256

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
 Frame = -1

Query: 312 QYRHRG-DVGVGFGRGHSNRRXXXXXXXXXXXXXXXG------DIFMEAGRLAAEYLVSQ 154
           +++HRG + G G GRG S                         D+FMEAGRLA EYLVSQ
Sbjct: 39  EHQHRGFNRGYGRGRGRSKSYHNQLPPPLPPPPVQRRSSGGGGDVFMEAGRLATEYLVSQ 98

Query: 153 GLLPPNVLSLKWHNQN 106
           G+LPP VLS KW N N
Sbjct: 99  GVLPPTVLSSKWQNAN 114


>ref|XP_002300593.1| predicted protein [Populus trichocarpa] gi|222847851|gb|EEE85398.1|
           predicted protein [Populus trichocarpa]
          Length = 732

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/101 (40%), Positives = 47/101 (46%)
 Frame = -1

Query: 303 HRGDVGVGFGRGHSNRRXXXXXXXXXXXXXXXGDIFMEAGRLAAEYLVSQGLLPPNVLSL 124
           HR     GFGRG  + R                D+ MEAGRLAAEYLVS+GLLP + LS 
Sbjct: 42  HRSFNNRGFGRGQGHPRSIRQPPQPPTQKG---DVLMEAGRLAAEYLVSKGLLPQSALSG 98

Query: 123 KWHNQNHNGGSFKKHXXXXXXXXXXXGRTSALARLGSAVLD 1
           KW N      +               GRTSA +RLGS   D
Sbjct: 99  KWQNGGFKMQAGDYQDFRQQEDLMHEGRTSAHSRLGSGASD 139


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