BLASTX nr result

ID: Glycyrrhiza24_contig00013215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013215
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45150.1| unknown [Lotus japonicus]                              161   1e-37
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo...   161   1e-37
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo...   161   1e-37
gb|ACU13643.1| unknown [Glycine max]                                  161   1e-37
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ...   158   6e-37

>gb|AFK45150.1| unknown [Lotus japonicus]
          Length = 88

 Score =  161 bits (407), Expect = 1e-37
 Identities = 77/77 (100%), Positives = 77/77 (100%)
 Frame = +2

Query: 140 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 319
           MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 320 GEILIRCNNVLYLRGVP 370
           GEILIRCNNVLYLRGVP
Sbjct: 61  GEILIRCNNVLYLRGVP 77


>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
          Length = 88

 Score =  161 bits (407), Expect = 1e-37
 Identities = 77/77 (100%), Positives = 77/77 (100%)
 Frame = +2

Query: 140 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 319
           MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 320 GEILIRCNNVLYLRGVP 370
           GEILIRCNNVLYLRGVP
Sbjct: 61  GEILIRCNNVLYLRGVP 77


>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
           gi|255628071|gb|ACU14380.1| unknown [Glycine max]
          Length = 88

 Score =  161 bits (407), Expect = 1e-37
 Identities = 77/77 (100%), Positives = 77/77 (100%)
 Frame = +2

Query: 140 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 319
           MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 320 GEILIRCNNVLYLRGVP 370
           GEILIRCNNVLYLRGVP
Sbjct: 61  GEILIRCNNVLYLRGVP 77


>gb|ACU13643.1| unknown [Glycine max]
          Length = 88

 Score =  161 bits (407), Expect = 1e-37
 Identities = 77/77 (100%), Positives = 77/77 (100%)
 Frame = +2

Query: 140 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 319
           MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 320 GEILIRCNNVLYLRGVP 370
           GEILIRCNNVLYLRGVP
Sbjct: 61  GEILIRCNNVLYLRGVP 77


>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
           gi|355511167|gb|AES92309.1| Small nuclear
           ribonucleoprotein F [Medicago truncatula]
           gi|388505566|gb|AFK40849.1| unknown [Medicago
           truncatula]
          Length = 88

 Score =  158 bits (400), Expect = 6e-37
 Identities = 75/77 (97%), Positives = 76/77 (98%)
 Frame = +2

Query: 140 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 319
           MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEG FTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNL 60

Query: 320 GEILIRCNNVLYLRGVP 370
           GEILIRCNNVLY+RGVP
Sbjct: 61  GEILIRCNNVLYMRGVP 77


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