BLASTX nr result

ID: Glycyrrhiza24_contig00013211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013211
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   115   3e-24
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...   110   1e-22
ref|XP_004159882.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   104   6e-21
ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-...   104   6e-21
ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21

>ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
          Length = 1528

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/63 (88%), Positives = 59/63 (93%)
 Frame = -2

Query: 191 DDTLTKDQKAKKLKAVYEKLSCEGFTNNHIELALSALKECATFESALDWLCLNLPGNELP 12
           DDTLTK QKAKKLKAVYEKLSCEGF N+ IEL+LSAL+E ATFESALDWLCLNLPGNELP
Sbjct: 45  DDTLTKAQKAKKLKAVYEKLSCEGFGNHQIELSLSALREAATFESALDWLCLNLPGNELP 104

Query: 11  LKF 3
           LKF
Sbjct: 105 LKF 107


>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
           gi|297739540|emb|CBI29722.3| unnamed protein product
           [Vitis vinifera]
          Length = 1458

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/63 (84%), Positives = 58/63 (92%)
 Frame = -2

Query: 191 DDTLTKDQKAKKLKAVYEKLSCEGFTNNHIELALSALKECATFESALDWLCLNLPGNELP 12
           DDTL+K QKAKKL++VYEKLSCEGF+N+HIELALSALKE ATFESALDWLC NL  NELP
Sbjct: 59  DDTLSKAQKAKKLRSVYEKLSCEGFSNDHIELALSALKEGATFESALDWLCFNLSSNELP 118

Query: 11  LKF 3
           LKF
Sbjct: 119 LKF 121


>ref|XP_004159882.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226815 [Cucumis sativus]
          Length = 844

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/63 (79%), Positives = 57/63 (90%)
 Frame = -2

Query: 191 DDTLTKDQKAKKLKAVYEKLSCEGFTNNHIELALSALKECATFESALDWLCLNLPGNELP 12
           DD+L+K QK KKLKAVYEKLSCEGFTN+ IELALSA+ + ATFE+ALDWLCLNLP +ELP
Sbjct: 66  DDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLPSSELP 125

Query: 11  LKF 3
           LKF
Sbjct: 126 LKF 128


>ref|XP_004146280.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Cucumis sativus]
          Length = 1642

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/63 (79%), Positives = 57/63 (90%)
 Frame = -2

Query: 191 DDTLTKDQKAKKLKAVYEKLSCEGFTNNHIELALSALKECATFESALDWLCLNLPGNELP 12
           DD+L+K QK KKLKAVYEKLSCEGFTN+ IELALSA+ + ATFE+ALDWLCLNLP +ELP
Sbjct: 66  DDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLPSSELP 125

Query: 11  LKF 3
           LKF
Sbjct: 126 LKF 128


>ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|222838999|gb|EEE77350.1|
           predicted protein [Populus trichocarpa]
          Length = 870

 Score =  104 bits (260), Expect = 6e-21
 Identities = 49/62 (79%), Positives = 58/62 (93%)
 Frame = -2

Query: 188 DTLTKDQKAKKLKAVYEKLSCEGFTNNHIELALSALKECATFESALDWLCLNLPGNELPL 9
           ++L+K QKAKKLK +YEKLSCEGF+N+HIELALS+LK+ ATFE+ALDWLCLNL GNELPL
Sbjct: 62  NSLSKAQKAKKLKNIYEKLSCEGFSNDHIELALSSLKDNATFETALDWLCLNLAGNELPL 121

Query: 8   KF 3
           KF
Sbjct: 122 KF 123


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