BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013199
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619813.1| Pentatricopeptide repeat-containing protein ...   248   5e-64
ref|XP_003591696.1| Pentatricopeptide repeat-containing protein ...   243   1e-62
ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containi...   243   2e-62
ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containi...   243   2e-62
ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containi...   241   5e-62

>ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494828|gb|AES76031.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  248 bits (633), Expect = 5e-64
 Identities = 124/204 (60%), Positives = 158/204 (77%), Gaps = 8/204 (3%)
 Frame = +2

Query: 2   SFPSQASRATLHSHS-------LPSFIHSADDAISSFNHMLRM-HPTPPIFEFGKILGSL 157
           SFPS  +   L  HS       LPSFI + DDA+SSFNH+L M +P  PIFEF KIL SL
Sbjct: 15  SFPSTPNLFLLCRHSRLYYTQPLPSFIDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSL 74

Query: 158 VKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKMLTRSYQQDA 337
           VK+ ++ T +S  ++ME  +I+P++ T +ILINCFCHLG ++FAFSVL+K+    +  D 
Sbjct: 75  VKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDT 134

Query: 338 ITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETRAALQLLTQ 517
           +T+TTL+KGLCLNG+VR+AL FHDDVIAKGF L++VSY TLINGLC+ GETRAALQ+L +
Sbjct: 135 VTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRK 194

Query: 518 IEGQLVKLDVVMYNTIIDSLCKDK 589
           I+G LV+ +VVMYNTIIDSLCKDK
Sbjct: 195 IDGLLVQPNVVMYNTIIDSLCKDK 218



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 52/166 (31%), Positives = 87/166 (52%)
 Frame = +2

Query: 89  FNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCH 268
           FN M R   TP +  +  ++  L K K     V+L++ M    + PN VT + LI+    
Sbjct: 332 FNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK 391

Query: 269 LGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVS 448
            G++  A+ ++++M  R    D IT ++L+  LC N QV KA+     +  +G Q N  +
Sbjct: 392 YGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYT 451

Query: 449 YATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCKD 586
           Y  L++GLC+ G  + A  +   +  +   LDV MYN +++ LCK+
Sbjct: 452 YTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKE 497



 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 45/169 (26%), Positives = 84/169 (49%)
 Frame = +2

Query: 71  DDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSIL 250
           D+A++ F  M      P    +  ++  L+K         L   M       +++T S L
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSL 420

Query: 251 INCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGF 430
           ++  C   Q+  A ++++K+  +  Q +  T T L+ GLC NG+++ A   + D++ KG+
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480

Query: 431 QLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSL 577
            L+   Y  ++NGLC+ G    AL L++++E      D V Y T++ +L
Sbjct: 481 HLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRAL 529



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/171 (25%), Positives = 86/171 (50%)
 Frame = +2

Query: 74  DAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILI 253
           +A+  FN ML  +  P ++ F  ++  L K        ++   M    ++ NIVT + L+
Sbjct: 257 EAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLM 316

Query: 254 NCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQ 433
           + +  + Q + A  V + M  R    D  + + ++ GLC    V +A+    ++ +K   
Sbjct: 317 DGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMA 376

Query: 434 LNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCKD 586
            N V+Y +LI+GL + G    A  L+ ++  +    DV+ Y++++D+LCK+
Sbjct: 377 PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKN 427



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 39/171 (22%), Positives = 91/171 (53%)
 Frame = +2

Query: 59  IHSADDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVT 238
           +H  DD I+   H+ ++        +G ++  L K       + + ++++ + ++PN+V 
Sbjct: 154 LHFHDDVIAKGFHLDQV-------SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVM 206

Query: 239 LSILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVI 418
            + +I+  C    +  A  + S+M+ +    D +T TTL+ G  + G++++A+   + ++
Sbjct: 207 YNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQML 266

Query: 419 AKGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIID 571
            K  + +  ++  L++GLC+ GE + A  +L  +  Q V  ++V YN+++D
Sbjct: 267 LKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMD 317



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 41/155 (26%), Positives = 78/155 (50%)
 Frame = +2

Query: 119 PPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSV 298
           P +  +  ++   + +      V L+ +M    I+P++ T +IL++  C  G+M  A +V
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV 296

Query: 299 LSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCR 478
           L+ M+ +    + +T  +LM G  L  Q  KA    + +  +G   +  SY+ +INGLC+
Sbjct: 297 LAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCK 356

Query: 479 MGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCK 583
                 A+ L  ++  + +  + V YN++ID L K
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK 391



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 37/144 (25%), Positives = 80/144 (55%)
 Frame = +2

Query: 155 LVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKMLTRSYQQD 334
           LVK +N  T V  +  M    + P++ + SI+IN  C    +  A ++  +M ++S   +
Sbjct: 321 LVKQENKATFV--FNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPN 378

Query: 335 AITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETRAALQLLT 514
            +T  +L+ GL   G++  A    +++  +G   + ++Y++L++ LC+  +   A+ L+T
Sbjct: 379 TVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLIT 438

Query: 515 QIEGQLVKLDVVMYNTIIDSLCKD 586
           +I+ Q ++ ++  Y  ++D LCK+
Sbjct: 439 KIKDQGIQPNIYTYTILVDGLCKN 462



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 44/157 (28%), Positives = 77/157 (49%)
 Frame = +2

Query: 119 PPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSV 298
           P +  +  I+ SL K K       L   M    I P++VT + LI     +G++  A  +
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261

Query: 299 LSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCR 478
            ++ML ++ + D  T   L+ GLC  G+++KA      +I +G   N V+Y +L++G   
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFL 321

Query: 479 MGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCKDK 589
           + +   A  +   +  + V  DV  Y+ +I+ LCK K
Sbjct: 322 VKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTK 358



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/149 (24%), Positives = 67/149 (44%)
 Frame = +2

Query: 74  DAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILI 253
           DA    N M        +  +  +L +L K       ++L  +++   I+PNI T +IL+
Sbjct: 397 DAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILV 456

Query: 254 NCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQ 433
           +  C  G++  A +V   +L + Y  D      ++ GLC  G   +AL     +   G  
Sbjct: 457 DGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI 516

Query: 434 LNEVSYATLINGLCRMGETRAALQLLTQI 520
            + V+Y TL+  L    +   A++LL ++
Sbjct: 517 PDAVTYETLVRALFENDKNDKAVKLLREM 545


>ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480744|gb|AES61947.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  243 bits (621), Expect = 1e-62
 Identities = 119/194 (61%), Positives = 153/194 (78%), Gaps = 3/194 (1%)
 Frame = +2

Query: 17  ASRATLHSHSLPSF---IHSADDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVV 187
           +SR   +S+S  +F    +  DD +SSF+ ML ++P P + EFGKIL SLVK+K+YPTV+
Sbjct: 32  SSRINSNSNSNFNFNFNFNHVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVI 91

Query: 188 SLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGL 367
           SL+ ++EF  I+PNIV+LSILINC+CHLGQM FAFS+ +K+L   Y  + ITLTTL+KG 
Sbjct: 92  SLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGF 151

Query: 368 CLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDV 547
           CLN +V++AL FHD V+A GF  N+VSY TLINGLC++GETRAALQ+L QIEG+LV  DV
Sbjct: 152 CLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDV 211

Query: 548 VMYNTIIDSLCKDK 589
           VMY+TIID LCKDK
Sbjct: 212 VMYSTIIDGLCKDK 225



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
 Frame = +2

Query: 71  DDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSIL 250
           +DA   ++ M+    +P +     ++     +  +     L + M    I P++ T +IL
Sbjct: 228 NDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNIL 287

Query: 251 INCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIA--- 421
           ++  C  G++  A S ++ M+      D +T ++LM G CL  +V KA   +  VI    
Sbjct: 288 VDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFC 347

Query: 422 ------KGFQL-----------NEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVV 550
                 K   L           + V+Y +LI+GLC+ G    A +L+ ++       D++
Sbjct: 348 KIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADII 407

Query: 551 MYNTIIDSLCKD 586
            YN++ID+LCK+
Sbjct: 408 TYNSLIDALCKN 419



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
 Frame = +2

Query: 134 FGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKML 313
           +  I+  L K K       LY  M    I P +VTL+ LI  +C +GQ   AF +L +M+
Sbjct: 214 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 273

Query: 314 TRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATL----------- 460
            ++   D  T   L+  LC  G++++A      ++ +G   + V+Y++L           
Sbjct: 274 LKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVN 333

Query: 461 ---------INGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCK 583
                    ING C++     AL L  ++  + +  D V YN++ID LCK
Sbjct: 334 KAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCK 383



 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
 Frame = +2

Query: 74  DAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLS--- 244
           +A      M+  +  P ++ F  ++ +L K        S    M    + P++VT S   
Sbjct: 264 EAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 323

Query: 245 -----------------ILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCL 373
                            I+IN FC +  +  A S+  +M  R    D +T  +L+ GLC 
Sbjct: 324 DGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCK 383

Query: 374 NGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVM 553
           +G++  A +  D++   G   + ++Y +LI+ LC+      A+ L+ +I+ Q ++LD+  
Sbjct: 384 SGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYT 443

Query: 554 YNTIIDSLCK 583
           YN +ID LCK
Sbjct: 444 YNILIDGLCK 453



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 42/146 (28%), Positives = 72/146 (49%)
 Frame = +2

Query: 143 ILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKMLTRS 322
           ++    K+K     +SL+  M    I P+ VT + LI+  C  G++ +A+ ++ +M    
Sbjct: 342 VINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSG 401

Query: 323 YQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETRAAL 502
              D IT  +L+  LC N  V KA+     +  +G QL+  +Y  LI+GLC+ G  + A 
Sbjct: 402 QPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQ 461

Query: 503 QLLTQIEGQLVKLDVVMYNTIIDSLC 580
            +   +  +   L V  Y  +I+ LC
Sbjct: 462 VIFQDLLIKGYNLTVWTYTIMINGLC 487



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 48/173 (27%), Positives = 75/173 (43%)
 Frame = +2

Query: 59  IHSADDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVT 238
           I   D A+S F  M      P    +  ++  L K         L   M       +I+T
Sbjct: 349 IKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIIT 408

Query: 239 LSILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVI 418
            + LI+  C    +  A +++ K+  +  Q D  T   L+ GLC  G+++ A     D++
Sbjct: 409 YNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLL 468

Query: 419 AKGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSL 577
            KG+ L   +Y  +INGLC  G    A  LL+++E      D V   TII +L
Sbjct: 469 IKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 521



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 37/173 (21%), Positives = 87/173 (50%)
 Frame = +2

Query: 62  HSADDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTL 241
           H   +A+   +H+L +        +G ++  L K+      + + +++E   +  ++V  
Sbjct: 155 HKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMY 214

Query: 242 SILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIA 421
           S +I+  C    ++ A+ + S+M+T+      +TL +L+ G C+ GQ ++A     +++ 
Sbjct: 215 STIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVL 274

Query: 422 KGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLC 580
           K    +  ++  L++ LC+ G+ + A   +  +  + V  DVV Y++++D  C
Sbjct: 275 KNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYC 327


>ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  243 bits (620), Expect = 2e-62
 Identities = 120/184 (65%), Positives = 145/184 (78%), Gaps = 1/184 (0%)
 Frame = +2

Query: 41  HSLPSFIHSA-DDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFME 217
           HS P  IH    DA+S FN ML M  TP I EFGKILGSLVKMK++PT +SL ++ME   
Sbjct: 103 HSQPPSIHDVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKG 162

Query: 218 IEPNIVTLSILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKAL 397
           IEP++VTLSILINCFCHLGQM F+FSVL K+L   YQ + I LTTLMKGLCL G+V+K+L
Sbjct: 163 IEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSL 222

Query: 398 QFHDDVIAKGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSL 577
            FHD V+A+GFQ+N+VSY TL+NGLC++GETR A++LL  IE +  + DVVMYNTIID L
Sbjct: 223 HFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282

Query: 578 CKDK 589
           CKDK
Sbjct: 283 CKDK 286



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 1/194 (0%)
 Frame = +2

Query: 8   PSQASRATL-HSHSLPSFIHSADDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTV 184
           P+  + +TL   + L   +H+A      F+ M++    P +  +  ++  L K K+    
Sbjct: 375 PNVVTYSTLMDGYCLVGEVHNAKQI---FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEA 431

Query: 185 VSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKG 364
           ++L + M    + PN VT + LI+  C  G++  A  ++ ++  R    D IT T+L+ G
Sbjct: 432 MNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDG 491

Query: 365 LCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLD 544
           LC N  + KA+     +  +G Q N+ +Y  LI+GLC+    + A +L   I  +   +D
Sbjct: 492 LCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCID 551

Query: 545 VVMYNTIIDSLCKD 586
           V  YN +I  LCK+
Sbjct: 552 VYTYNVMIGGLCKE 565



 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 51/157 (32%), Positives = 80/157 (50%)
 Frame = +2

Query: 119 PPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSV 298
           P +  +  I+  L K K        Y  M    I P+++T S LI  FC  GQ+  AFS+
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSL 329

Query: 299 LSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCR 478
           L++M  ++   D  T T L+  LC  G++++A      +  +G + N V+Y+TL++G C 
Sbjct: 330 LNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCL 389

Query: 479 MGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCKDK 589
           +GE   A Q+   +    V   V  YN +I+ LCK K
Sbjct: 390 VGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGK 426



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/171 (26%), Positives = 87/171 (50%)
 Frame = +2

Query: 77  AISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILIN 256
           A S  N M   +  P ++ +  ++ +L K        +L   M    ++PN+VT S L++
Sbjct: 326 AFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMD 385

Query: 257 CFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQL 436
            +C +G++H A  +   M+         +   ++ GLC    V +A+    +++ K    
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445

Query: 437 NEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCKDK 589
           N V+Y +LI+GLC+ G   +AL L+ ++  +    DV+ Y +++D LCK++
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQ 496



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 42/149 (28%), Positives = 77/149 (51%)
 Frame = +2

Query: 134 FGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKML 313
           +G +L  L K+      + L + +E     P++V  + +I+  C    ++ A+   ++M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 314 TRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETR 493
           +R    D IT +TL+ G CL GQ+  A    +++  K    +  +Y  LI+ LC+ G+ +
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359

Query: 494 AALQLLTQIEGQLVKLDVVMYNTIIDSLC 580
            A  LL  +  + VK +VV Y+T++D  C
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYC 388



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = +2

Query: 218 IEPNIVTLSILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKG 364
           I PN+VTLSILINC  HLGQM F+FSVL K+L   YQ ++ITLTTLMKG
Sbjct: 7   IVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG 55



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/171 (23%), Positives = 79/171 (46%)
 Frame = +2

Query: 65  SADDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLS 244
           S D+A++    ML  +  P    +  ++  L K     + + L + +       +++T +
Sbjct: 427 SVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYT 486

Query: 245 ILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAK 424
            L++  C    +  A ++  KM  R  Q +  T T L+ GLC   +++ A +    ++ K
Sbjct: 487 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK 546

Query: 425 GFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSL 577
           G  ++  +Y  +I GLC+ G    AL + +++E      D V +  II SL
Sbjct: 547 GCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSL 597


>ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  243 bits (619), Expect = 2e-62
 Identities = 120/187 (64%), Positives = 146/187 (78%), Gaps = 1/187 (0%)
 Frame = +2

Query: 32  LHSHSLPSFIHSA-DDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRME 208
           L+ HS P  I +  DDAIS FN ML MH TPPI EFG+ILG L KMK+Y T +SL ++ME
Sbjct: 20  LYFHSQPPSIDNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQME 79

Query: 209 FMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVR 388
              IEPN+VTL+ILINCFCHLGQM F+FSVL K+L   YQ + ITLTTLMKGLCL G+V+
Sbjct: 80  VKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQ 139

Query: 389 KALQFHDDVIAKGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTII 568
           K++ FHD V+A+GFQ+N+VSY TL+NGLC++GETR A++ L  IE     L+VVMYNTII
Sbjct: 140 KSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTII 199

Query: 569 DSLCKDK 589
           D LCKDK
Sbjct: 200 DGLCKDK 206



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 49/172 (28%), Positives = 82/172 (47%)
 Frame = +2

Query: 71  DDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSIL 250
           ++A   ++ M      P +  +  ++G            SL   M    I PN+ T +IL
Sbjct: 209 NEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAIL 268

Query: 251 INCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGF 430
           I+  C  G++  A ++L++M  R    D +T T+L+ G C N  + KA      +   G 
Sbjct: 269 IDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGI 328

Query: 431 QLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCKD 586
           Q N+ +Y  LI+GLC+ G  + A +L   +  +   +DV  YN +I  LCK+
Sbjct: 329 QPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKE 380



 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 44/152 (28%), Positives = 77/152 (50%)
 Frame = +2

Query: 134 FGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKML 313
           +G +L  L K+      +   + +E      N+V  + +I+  C    ++ A+   S+M 
Sbjct: 160 YGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMN 219

Query: 314 TRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETR 493
            R    + IT TTL+ G CL GQ+  A    +++I K    N  +YA LI+ LC+ G+ +
Sbjct: 220 ARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVK 279

Query: 494 AALQLLTQIEGQLVKLDVVMYNTIIDSLCKDK 589
            A  LL ++  +    DVV Y +++D  CK++
Sbjct: 280 EAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQ 311



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 42/150 (28%), Positives = 75/150 (50%)
 Frame = +2

Query: 134 FGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKML 313
           +  I+  L K K        Y  M    I PN++T + LI  FC  GQ+  AFS+L++M+
Sbjct: 195 YNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMI 254

Query: 314 TRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETR 493
            ++   +  T   L+  LC  G+V++A     ++  +G   + V+Y +L++G C+     
Sbjct: 255 LKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLD 314

Query: 494 AALQLLTQIEGQLVKLDVVMYNTIIDSLCK 583
            A  L  +++   ++ +   Y  +ID LCK
Sbjct: 315 KATALFMKMKEWGIQPNKYTYTALIDGLCK 344



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 45/169 (26%), Positives = 82/169 (48%)
 Frame = +2

Query: 77  AISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILIN 256
           A S  N M+  +  P ++ +  ++ +L K        +L   M +     ++VT + L++
Sbjct: 246 AFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLD 305

Query: 257 CFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQL 436
            FC    +  A ++  KM     Q +  T T L+ GLC  G+++ A +   D++ KG  +
Sbjct: 306 GFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCI 365

Query: 437 NEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCK 583
           +  +Y  +I GLC+ G    AL + +++E      +VV +  II SL K
Sbjct: 366 DVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFK 414


>ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  241 bits (616), Expect = 5e-62
 Identities = 115/180 (63%), Positives = 143/180 (79%)
 Frame = +2

Query: 50  PSFIHSADDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPN 229
           PS  +  DD +S FN +L +  TPPI EFGKILG LVKMK+YPT +SL ++ME   IEPN
Sbjct: 40  PSIENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPN 99

Query: 230 IVTLSILINCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHD 409
           +VTL+ILINCFCHLGQM F+FSVL K+L   YQ D ITL TLMKGLCL G+V+++L FHD
Sbjct: 100 LVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHD 159

Query: 410 DVIAKGFQLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCKDK 589
            V+A+GFQ+N+VSY TL+NGLC++GETR A++LL  IE +  + DVVMY+TIID LCKDK
Sbjct: 160 KVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDK 219



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 47/152 (30%), Positives = 80/152 (52%)
 Frame = +2

Query: 134 FGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSVLSKML 313
           +G +L  L K+      V L + +E     P++V  S +I+  C    ++ A+   S+M 
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMN 232

Query: 314 TRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCRMGETR 493
            R    + IT +TL+ G CL GQ+  A    +++I K    N  +Y  LI+ LC+ G+ +
Sbjct: 233 ARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVK 292

Query: 494 AALQLLTQIEGQLVKLDVVMYNTIIDSLCKDK 589
            A +LL ++  +    DVV YN+++D LCK +
Sbjct: 293 EAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQ 324



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 44/155 (28%), Positives = 79/155 (50%)
 Frame = +2

Query: 119 PPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILINCFCHLGQMHFAFSV 298
           P +  +  I+  L K K        +  M    I PN++T S LI  FC  GQ+  AFS+
Sbjct: 203 PDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSL 262

Query: 299 LSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQLNEVSYATLINGLCR 478
           L++M+ ++   +  T   L+  LC  G+V++A +   ++  KG   + V+Y ++++GLC+
Sbjct: 263 LNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCK 322

Query: 479 MGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCK 583
                 A  L  +++   ++ +   Y  +ID LCK
Sbjct: 323 SQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCK 357



 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 46/172 (26%), Positives = 79/172 (45%)
 Frame = +2

Query: 71  DDAISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSIL 250
           + A   F+ M      P +  +  ++             SL   M    I PN+ T +IL
Sbjct: 222 NQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNIL 281

Query: 251 INCFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGF 430
           I+  C  G++  A  +L++M  +    D +T  +++ GLC +  + KA      +   G 
Sbjct: 282 IDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGI 341

Query: 431 QLNEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSLCKD 586
           Q N+ +Y  LI+GLC+ G  + A +L   +  +   +DV  YN +I  LCK+
Sbjct: 342 QPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKE 393



 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 40/167 (23%), Positives = 78/167 (46%)
 Frame = +2

Query: 77  AISSFNHMLRMHPTPPIFEFGKILGSLVKMKNYPTVVSLYQRMEFMEIEPNIVTLSILIN 256
           A S  N M+  +  P ++ +  ++ +L K         L   M       ++VT + +++
Sbjct: 259 AFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLD 318

Query: 257 CFCHLGQMHFAFSVLSKMLTRSYQQDAITLTTLMKGLCLNGQVRKALQFHDDVIAKGFQL 436
             C    +  A ++  KM     Q +  T T L+ GLC  G+++ A +    ++ KG  +
Sbjct: 319 GLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCI 378

Query: 437 NEVSYATLINGLCRMGETRAALQLLTQIEGQLVKLDVVMYNTIIDSL 577
           +  +Y  +I+GLC+ G    AL + +++E      + V ++ II SL
Sbjct: 379 DVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSL 425