BLASTX nr result

ID: Glycyrrhiza24_contig00013195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013195
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626568.1| Cyclic nucleotide-gated channel C [Medicago ...   132   6e-30
ref|XP_003553784.1| PREDICTED: cyclic nucleotide-gated ion chann...   128   5e-28
ref|XP_003520870.1| PREDICTED: cyclic nucleotide-gated ion chann...   125   3e-27
ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putativ...    94   9e-18
ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion chann...    94   1e-17

>ref|XP_003626568.1| Cyclic nucleotide-gated channel C [Medicago truncatula]
           gi|355501583|gb|AES82786.1| Cyclic nucleotide-gated
           channel C [Medicago truncatula]
          Length = 718

 Score =  132 bits (332), Expect(2) = 6e-30
 Identities = 76/118 (64%), Positives = 86/118 (72%), Gaps = 6/118 (5%)
 Frame = +2

Query: 71  TIVQEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAIL-PVSNG----- 232
           +I QE+ VN    KRK R SVS VL SIGR+  SGS+KMKK RRPS+I+ PVS G     
Sbjct: 21  SIEQENTVN----KRKERPSVSAVLKSIGRRFVSGSEKMKKFRRPSSIVHPVSEGQTKKL 76

Query: 233 DGQTRKILDPQSPMLQKWNRIFVITGVMAISVDPLFFYIPEIVGINKCLDMNRGLQIT 406
           D   RKILDPQ PMLQKWN+IFVIT V+AISVDP FFYIP IVG  KCLD++  LQ T
Sbjct: 77  DSSKRKILDPQGPMLQKWNKIFVITCVLAISVDPFFFYIPVIVGKQKCLDLDGTLQTT 134



 Score = 23.5 bits (49), Expect(2) = 6e-30
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 43 WRSESSFSID 72
          WRSESSFSI+
Sbjct: 14 WRSESSFSIE 23


>ref|XP_003553784.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max]
          Length = 716

 Score =  128 bits (321), Expect = 5e-28
 Identities = 68/113 (60%), Positives = 86/113 (76%), Gaps = 3/113 (2%)
 Frame = +2

Query: 80  QEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAILPVSNGDGQT---RK 250
           QED +++G+HKR  R SV  VL SIGR++ESGS+KMK LRR SA+ PVS+G  +    +K
Sbjct: 24  QEDSIDSGNHKR--RPSVGTVLKSIGRRLESGSEKMKNLRRASAVHPVSDGQKKLPPRKK 81

Query: 251 ILDPQSPMLQKWNRIFVITGVMAISVDPLFFYIPEIVGINKCLDMNRGLQITA 409
           ILDPQ P+LQKWN+IFVIT V+A+SVDPLF YIP I    KC+ ++  LQITA
Sbjct: 82  ILDPQGPVLQKWNKIFVITCVLAVSVDPLFSYIPVINNEEKCVHLDGALQITA 134


>ref|XP_003520870.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max]
          Length = 728

 Score =  125 bits (315), Expect = 3e-27
 Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
 Frame = +2

Query: 80  QEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAILPVSNGDGQT---RK 250
           QE+ +NNG+HKR  R SV  VL SIGR++ES S+KMK L R SA+ PVS+G  +    +K
Sbjct: 24  QENSINNGNHKR--RPSVGAVLKSIGRRLESVSEKMKNLTRASAVHPVSDGKKKLPPRKK 81

Query: 251 ILDPQSPMLQKWNRIFVITGVMAISVDPLFFYIPEIVGINKCLDMNRGLQITA 409
           ILDPQ P+LQKWN+IFVIT VMA+SVDPLFFYIP I    K +D++  LQITA
Sbjct: 82  ILDPQGPILQKWNKIFVITCVMAVSVDPLFFYIPVINNARKRVDLDGVLQITA 134


>ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223547481|gb|EEF48976.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 838

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/110 (43%), Positives = 73/110 (66%), Gaps = 4/110 (3%)
 Frame = +2

Query: 92  VNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRP----SAILPVSNGDGQTRKILD 259
           V++G H RK R S++ V     R +ESGS+++K++R+     S    V+ G     KILD
Sbjct: 26  VSDGIHSRKIRMSITSVSEKFQRGLESGSERIKRIRKSLKSYSFGSAVTKGLNSGNKILD 85

Query: 260 PQSPMLQKWNRIFVITGVMAISVDPLFFYIPEIVGINKCLDMNRGLQITA 409
           PQ P LQ+WN+IFV++ ++A+S+DPLFFY+P I  I KCL ++  ++I A
Sbjct: 86  PQGPFLQRWNKIFVLSCLIAVSLDPLFFYVPVINDIEKCLGLDSRMEIVA 135


>ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion channel 1 [Vitis vinifera]
           gi|302143681|emb|CBI22542.3| unnamed protein product
           [Vitis vinifera]
          Length = 709

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
 Frame = +2

Query: 92  VNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAILPVSNG--DGQTRKILDPQ 265
           +NNG    K R +++ V     R +E GS+++  +RR             G  +KILDPQ
Sbjct: 26  INNGVRSGKIRLAINSVSGKFQRGLECGSERINSIRRSLKSFSFRRNLEKGSGKKILDPQ 85

Query: 266 SPMLQKWNRIFVITGVMAISVDPLFFYIPEIVGINKCLDMNRGLQITA 409
            P LQKWN+IFV++ ++A+S+DPLFFYIP I  + KCL ++  LQITA
Sbjct: 86  GPFLQKWNKIFVLSCIIAVSLDPLFFYIPVIDKLKKCLSLDESLQITA 133


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