BLASTX nr result

ID: Glycyrrhiza24_contig00013193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013193
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804...   292   1e-76
ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792...   284   4e-74
ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [M...   274   4e-71
emb|CBI31687.3| unnamed protein product [Vitis vinifera]              228   3e-57
ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258...   228   3e-57

>ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
          Length = 276

 Score =  292 bits (748), Expect = 1e-76
 Identities = 160/248 (64%), Positives = 169/248 (68%)
 Frame = +1

Query: 217 NSQGSLLVRNIPLDCRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASE 396
           +S GSLLVRNIPLDCR EELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASE
Sbjct: 44  DSNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASE 103

Query: 397 AQYHMNRQIFAGREISVVVASETRKRPEEMRQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 576
           AQYHMNRQIFAGREISVVVA ETRKRPEEMR                             
Sbjct: 104 AQYHMNRQIFAGREISVVVAEETRKRPEEMRH---RTSRLRGPAGYGGQRSSRYGRSRSR 160

Query: 577 XXXXXXXXXXHSGSRNRYRSRSFSPAPRRQSDYSVSPRRQAEXXXXXXXXXXXXXLGDRN 756
                     HSGSRNRYRSRS+SPAPRRQSDYSVSPRRQAE               +R+
Sbjct: 161 SVTRSRSPPYHSGSRNRYRSRSYSPAPRRQSDYSVSPRRQAEHPRSPRGPPR-----ERD 215

Query: 757 VDHKRRSYSPAYDNGADQNQNNGYAEKSVYKSEGDRGQWKSSLXXXXXXXXXXXXXXXXA 936
            + KRRSYSPAY NG +QNQ+NGYAEKS+YKS+ DRGQWKSS                 A
Sbjct: 216 GEQKRRSYSPAYGNGIEQNQSNGYAEKSMYKSDADRGQWKSS-------RSPPGSRSRSA 268

Query: 937 ELSPRRGR 960
           ELSPRRGR
Sbjct: 269 ELSPRRGR 276


>ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
          Length = 271

 Score =  284 bits (726), Expect = 4e-74
 Identities = 159/250 (63%), Positives = 167/250 (66%), Gaps = 2/250 (0%)
 Frame = +1

Query: 217 NSQGSLLVRNIPLDCRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASE 396
           +S GSLLVRNIPLDCR EELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASE
Sbjct: 37  DSNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASE 96

Query: 397 AQYHMNRQIFAGREISVVVASETRKRPEEMRQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 576
           AQYHMNRQIFAGREISVVVA ETRKRPEEMR                             
Sbjct: 97  AQYHMNRQIFAGREISVVVAEETRKRPEEMRH---RTSRFRGPASYGGRRSSHYGRSRSR 153

Query: 577 XXXXXXXXXXHSGSRNRYRSRSFSPAPRRQSDYSVSPRRQAEXXXXXXXXXXXXXLGDRN 756
                     HSGSRNRYRSRS+SPAPRRQSDYSVSP RQAE               +++
Sbjct: 154 SITRSRSPPYHSGSRNRYRSRSYSPAPRRQSDYSVSPGRQAEHPRSPRGPPR-----EKD 208

Query: 757 VDHKRRSYSPAYDNGADQNQNNGYAEKSVYKSE--GDRGQWKSSLXXXXXXXXXXXXXXX 930
            D KRRSYSPAY NG +QNQ+NGYAEKS+YKSE   DR QWKSS                
Sbjct: 209 GDQKRRSYSPAYGNGIEQNQSNGYAEKSMYKSEADADRSQWKSS-------RSPPGSRSR 261

Query: 931 XAELSPRRGR 960
            AELSPRRGR
Sbjct: 262 SAELSPRRGR 271


>ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355517741|gb|AES99364.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 286

 Score =  274 bits (700), Expect = 4e-71
 Identities = 154/252 (61%), Positives = 165/252 (65%), Gaps = 3/252 (1%)
 Frame = +1

Query: 214 ENSQGSLLVRNIPLDCRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDAS 393
           E++ GSLLVRNIPLDCR EELR PFERFGPVRDVYIPKDYYSG+PRGFAFVQFVD Y+AS
Sbjct: 43  ESNNGSLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEAS 102

Query: 394 EAQYHMNRQIFAGREISVVVASETRKRPEEMRQXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           EAQYHM+RQIFAGREISVVVA+ETRKRPEEMR                            
Sbjct: 103 EAQYHMDRQIFAGREISVVVAAETRKRPEEMRH--RTSRSRGPGGSYGGQRSSYHGRSRS 160

Query: 574 XXXXXXXXXXXHSGSRNRY--RSRSFSPAPRRQSDYSVSPRRQAEXXXXXXXXXXXXXLG 747
                      HSGSRNRY  RSRSFSPAPRRQ DYSVSPRR AE             + 
Sbjct: 161 RSISRSRSPPYHSGSRNRYRSRSRSFSPAPRRQGDYSVSPRRHAERPRSPRSPPRSPPV- 219

Query: 748 DRNVDHKRRSYSP-AYDNGADQNQNNGYAEKSVYKSEGDRGQWKSSLXXXXXXXXXXXXX 924
           +R+ DHKRRSYSP  Y N  DQNQ+NGYAEKSVYKSE DRG WKSS              
Sbjct: 220 ERDADHKRRSYSPLGYGNDVDQNQSNGYAEKSVYKSEADRGPWKSS-----RSPPGSRSR 274

Query: 925 XXXAELSPRRGR 960
               +LSPRRGR
Sbjct: 275 SRSVDLSPRRGR 286


>emb|CBI31687.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  228 bits (581), Expect = 3e-57
 Identities = 128/224 (57%), Positives = 146/224 (65%), Gaps = 2/224 (0%)
 Frame = +1

Query: 214 ENSQGSLLVRNIPLDCRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDAS 393
           E + GSLLVRNIPL+CR E+LRVPFERFG VRDVY+PKDYY+GEPRGFAFVQFVDPY+AS
Sbjct: 113 EQNHGSLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEAS 172

Query: 394 EAQYHMNRQIFAGREISVVVASETRKRPEEMRQXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           EAQYHMN QIFAGREISVVVA+ETRKRPEEMR                            
Sbjct: 173 EAQYHMNGQIFAGREISVVVAAETRKRPEEMRTRARVRGPSSYGGRRSSYYGGSRSRSVS 232

Query: 574 XXXXXXXXXXXHSGSRNRYRSRSFSPAPRRQSDYSVSPRRQAEXXXXXXXXXXXXXLGDR 753
                       SGSR RYRSRS+SP PRR+ DYSVSPRR+ E               +R
Sbjct: 233 RSRSPPRLL---SGSR-RYRSRSYSPVPRRRGDYSVSPRRRVEHPRSPRDHPP-----ER 283

Query: 754 NVDHKRRSYSPAYDNGADQNQN--NGYAEKSVYKSEGDRGQWKS 879
           + DH RRSYSP YD+ ADQN +  NGY EKS Y+ +  R + +S
Sbjct: 284 DGDHIRRSYSPGYDDAADQNHHTGNGYLEKSAYEPDEARDRRRS 327


>ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
          Length = 276

 Score =  228 bits (581), Expect = 3e-57
 Identities = 128/224 (57%), Positives = 146/224 (65%), Gaps = 2/224 (0%)
 Frame = +1

Query: 214 ENSQGSLLVRNIPLDCRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDAS 393
           E + GSLLVRNIPL+CR E+LRVPFERFG VRDVY+PKDYY+GEPRGFAFVQFVDPY+AS
Sbjct: 36  EQNHGSLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEAS 95

Query: 394 EAQYHMNRQIFAGREISVVVASETRKRPEEMRQXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           EAQYHMN QIFAGREISVVVA+ETRKRPEEMR                            
Sbjct: 96  EAQYHMNGQIFAGREISVVVAAETRKRPEEMRTRARVRGPSSYGGRRSSYYGGSRSRSVS 155

Query: 574 XXXXXXXXXXXHSGSRNRYRSRSFSPAPRRQSDYSVSPRRQAEXXXXXXXXXXXXXLGDR 753
                       SGSR RYRSRS+SP PRR+ DYSVSPRR+ E               +R
Sbjct: 156 RSRSPPRLL---SGSR-RYRSRSYSPVPRRRGDYSVSPRRRVEHPRSPRDHPP-----ER 206

Query: 754 NVDHKRRSYSPAYDNGADQNQN--NGYAEKSVYKSEGDRGQWKS 879
           + DH RRSYSP YD+ ADQN +  NGY EKS Y+ +  R + +S
Sbjct: 207 DGDHIRRSYSPGYDDAADQNHHTGNGYLEKSAYEPDEARDRRRS 250


Top