BLASTX nr result

ID: Glycyrrhiza24_contig00013133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013133
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609294.1| DEAD-box ATP-dependent RNA helicase [Medicag...   367   e-127
ref|XP_003541505.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   355   e-124
ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   353   e-122
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   294   e-102
ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   291   e-102

>ref|XP_003609294.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355510349|gb|AES91491.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 671

 Score =  367 bits (942), Expect(2) = e-127
 Identities = 201/313 (64%), Positives = 221/313 (70%), Gaps = 24/313 (7%)
 Frame = -1

Query: 1174 VGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADALE 995
            VGRVGSSTELIVQKIE V D +KR+ LVDLLRR   +  +G  ALTLVFVETK+GADALE
Sbjct: 362  VGRVGSSTELIVQKIESVQDMEKRTRLVDLLRR---NVVNGKLALTLVFVETKKGADALE 418

Query: 994  NWLTRNGFPAIAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNFDL 815
            NWL R  FPAIAIHGDKVQMERERALRSFKRG TPIMVATDVASRGLDIPHVAHV+NFDL
Sbjct: 419  NWLCRINFPAIAIHGDKVQMERERALRSFKRGLTPIMVATDVASRGLDIPHVAHVINFDL 478

Query: 814  PRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYGEGS 635
            PRDIDDYVHRIGRTGRAG+SGLATAFFS KN P+AK+L+GLLQEA QEVP+WL QY E S
Sbjct: 479  PRDIDDYVHRIGRTGRAGQSGLATAFFSTKNMPMAKSLVGLLQEAKQEVPAWLVQYSECS 538

Query: 634  TSGGRSH-GSQRH-WRGNYGGRDFRNASGPPELEXXXXXXXXXXXNADH----------- 494
              GGRS  GSQR  WRGNYGGRDFRNA+ P  +E             D+           
Sbjct: 539  APGGRSSVGSQRSPWRGNYGGRDFRNATEPGMVENYNSYNSNYSNYGDNGYHNVPEQVQN 598

Query: 493  -----------HAVDSHTXXXXXXXXXXXXXSFDAPNTIFAGSYTCADADLYEGVKGKDG 347
                       HA +S+T             SFD  NT+ AG +   DA L EG  G +G
Sbjct: 599  YNYNGTYNNGDHAANSYTDASLDVTNSNNDCSFDNTNTVVAGGFNYTDAGLLEGSDGTNG 658

Query: 346  PCGFASVVATGWD 308
            PCG+ASVV TGWD
Sbjct: 659  PCGYASVVPTGWD 671



 Score =  117 bits (292), Expect(2) = e-127
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = -3

Query: 1442 DRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSATFPDDIQKLASDFLSNYIFLAVGRVG 1263
            DRMLDMGFEHQIR IV+QMHMPPPG RQTLLFSATFPD+IQKLASDFLSNY+FLAVGRVG
Sbjct: 307  DRMLDMGFEHQIRNIVQQMHMPPPGDRQTLLFSATFPDNIQKLASDFLSNYVFLAVGRVG 366


>ref|XP_003541505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine max]
          Length = 586

 Score =  355 bits (912), Expect(2) = e-124
 Identities = 198/297 (66%), Positives = 220/297 (74%), Gaps = 8/297 (2%)
 Frame = -1

Query: 1174 VGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADALE 995
            VGRVGSSTELIVQKIE V D DKR HL+  LRRQ  HG +G HALTLVFVETKRGAD LE
Sbjct: 294  VGRVGSSTELIVQKIEPVQDMDKRDHLIKHLRRQSVHGFNGKHALTLVFVETKRGADVLE 353

Query: 994  NWLTRNGFPAIAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNFDL 815
             WL R+GF A+AIHGDKVQMERERALRSFK G TPI+VATDVASRGLDIPHVAHV+NFDL
Sbjct: 354  GWLLRSGFSAVAIHGDKVQMERERALRSFKSGVTPILVATDVASRGLDIPHVAHVINFDL 413

Query: 814  PRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYGEGS 635
            PRDID+YVHRIGRTGRAGKSGLATAFFS+KN+P+AK+LIGLLQEANQEVPSWL+QY EGS
Sbjct: 414  PRDIDNYVHRIGRTGRAGKSGLATAFFSDKNSPIAKSLIGLLQEANQEVPSWLNQYAEGS 473

Query: 634  TSGGRS--HGSQRHWR-GNYGGRDFRNASGPPELEXXXXXXXXXXXNADHHAVDSH---T 473
            +SGG S  +G+QR+   G+YGGRDFRN     E E           NAD HAV+S+    
Sbjct: 474  SSGGGSQGYGAQRYSSGGSYGGRDFRNVI---EAEVENNNCYSTNVNAD-HAVESYYTAD 529

Query: 472  XXXXXXXXXXXXXSFDAPNTIFAGSYTCADADLYEGV--KGKDGPCGFASVVATGWD 308
                         SFD  N   AGSY   D     G     +DGP G+AS+VATGWD
Sbjct: 530  DASYDIQNSNIDSSFDTLNIASAGSYNHTDFCELNGAGRVEEDGPLGYASIVATGWD 586



 Score =  116 bits (291), Expect(2) = e-124
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = -3

Query: 1442 DRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSATFPDDIQKLASDFLSNYIFLAVGRVG 1263
            DRMLDMGFEHQIRKIVEQMHMPPPG RQTLLFSATFP+ IQKLASDFLSNYIFL+VGRVG
Sbjct: 239  DRMLDMGFEHQIRKIVEQMHMPPPGIRQTLLFSATFPNGIQKLASDFLSNYIFLSVGRVG 298


>ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine max]
          Length = 610

 Score =  353 bits (905), Expect(2) = e-122
 Identities = 191/298 (64%), Positives = 220/298 (73%), Gaps = 9/298 (3%)
 Frame = -1

Query: 1174 VGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADALE 995
            VGRVGSSTELIVQKIELV D DKR HL++ LRRQ  HGA+G HALTLVFVETKRGAD LE
Sbjct: 313  VGRVGSSTELIVQKIELVQDMDKRDHLINHLRRQKVHGANGKHALTLVFVETKRGADVLE 372

Query: 994  NWLTRNGFPAIAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNFDL 815
             WL R+GF A+AIHGDKVQMERERALRSFK G TPI+VATDVASRGLDIPHVAHV+NFDL
Sbjct: 373  GWLLRSGFSAVAIHGDKVQMERERALRSFKSGLTPILVATDVASRGLDIPHVAHVINFDL 432

Query: 814  PRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYG-EG 638
            PRDID+YVHRIGRTGRAGKSGLATAFFS+KN+P+AKALIGLLQEANQEVPSWL+QY  EG
Sbjct: 433  PRDIDNYVHRIGRTGRAGKSGLATAFFSDKNSPIAKALIGLLQEANQEVPSWLNQYATEG 492

Query: 637  STSGG--RSHGSQRHWRGNYGGRDFRNASGPP-ELEXXXXXXXXXXXNADHHAVD--SHT 473
            S+SGG  R + +QR+  G+YGG DFRN + P  +               + +  D  S+ 
Sbjct: 493  SSSGGGGRGYEAQRYRSGSYGGHDFRNVTEPEVQNYNCYNTNGNAVQFVESYTADDASYV 552

Query: 472  XXXXXXXXXXXXXSFDAPNTIFAGSYTCADADLYEGVKGK---DGPCGFASVVATGWD 308
                         SF+  +   +GSY   D+    G  G+   DGP G+AS+VATGWD
Sbjct: 553  DTSYDIQNSNIDCSFECLHIASSGSYNHTDSCELNGGGGRVEEDGPRGYASIVATGWD 610



 Score =  113 bits (282), Expect(2) = e-122
 Identities = 55/60 (91%), Positives = 57/60 (95%)
 Frame = -3

Query: 1442 DRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSATFPDDIQKLASDFLSNYIFLAVGRVG 1263
            DRMLDMGFEHQIRKIVEQM MP PG RQTLLFSATFP+DIQKLASDFLSNYIFL+VGRVG
Sbjct: 258  DRMLDMGFEHQIRKIVEQMQMPSPGIRQTLLFSATFPNDIQKLASDFLSNYIFLSVGRVG 317


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
            gi|147854540|emb|CAN78578.1| hypothetical protein
            VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  294 bits (752), Expect(2) = e-102
 Identities = 147/203 (72%), Positives = 168/203 (82%)
 Frame = -1

Query: 1174 VGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADALE 995
            VGRVGSST+LIVQ++E VHDTDKRSHL+DLL  Q A+G HG   LTLVFVETK+GAD+LE
Sbjct: 371  VGRVGSSTDLIVQRVEFVHDTDKRSHLMDLLHAQRANGVHGKQYLTLVFVETKKGADSLE 430

Query: 994  NWLTRNGFPAIAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNFDL 815
            +WL  NGFPA  IHGD+ Q ERE+ALRSFK G TPI+VATDVA+RGLDIPHVAHVVNFDL
Sbjct: 431  HWLCMNGFPATTIHGDRTQQEREQALRSFKSGVTPILVATDVAARGLDIPHVAHVVNFDL 490

Query: 814  PRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYGEGS 635
            P DIDDYVHRIGRTGRAGK+GLATAFF++ N+ LAKAL  L+QEANQEVP+WLS+Y   S
Sbjct: 491  PNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSLAKALSELMQEANQEVPAWLSRYAARS 550

Query: 634  TSGGRSHGSQRHWRGNYGGRDFR 566
               GR+  S     G +GGRDFR
Sbjct: 551  PYVGRNRRS--GGGGRFGGRDFR 571



 Score =  107 bits (266), Expect(2) = e-102
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = -3

Query: 1442 DRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSATFPDDIQKLASDFLSNYIFLAVGRVG 1263
            DRMLDMGFE QIRKIVEQM MPP G RQT+LFSATFP +IQKLASDFLSNY+FLAVGRVG
Sbjct: 316  DRMLDMGFEPQIRKIVEQMDMPPQGVRQTMLFSATFPKEIQKLASDFLSNYVFLAVGRVG 375


>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 622

 Score =  291 bits (745), Expect(2) = e-102
 Identities = 142/203 (69%), Positives = 169/203 (83%)
 Frame = -1

Query: 1174 VGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADALE 995
            VGRVGSST+LIVQ++E VH++DKRSHL+DLL  Q A+GAHG  +LTLVFVETK+GAD+LE
Sbjct: 380  VGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHGKQSLTLVFVETKKGADSLE 439

Query: 994  NWLTRNGFPAIAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNFDL 815
            +WL  NGFPA  IHGD+ Q ERE ALRSFK G TPI+VATDVA+RGLDIPHVAHVVNFDL
Sbjct: 440  HWLCMNGFPATTIHGDRTQQEREHALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDL 499

Query: 814  PRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYGEGS 635
            P DIDDYVHRIGRTGRAGK+GLATAFF+  N+ LA+ L  L+QEANQEVP+WL++Y   +
Sbjct: 500  PNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLADLMQEANQEVPAWLTRYASRA 559

Query: 634  TSGGRSHGSQRHWRGNYGGRDFR 566
            + GG    ++R   G +GGRDFR
Sbjct: 560  SYGGGK--NRRSGGGRFGGRDFR 580



 Score =  107 bits (267), Expect(2) = e-102
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -3

Query: 1442 DRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSATFPDDIQKLASDFLSNYIFLAVGRVG 1263
            DRMLDMGFE QIRKIVEQM MPPPG RQT+LFSATFP +IQ+LASDFLS+YIFLAVGRVG
Sbjct: 325  DRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSSYIFLAVGRVG 384