BLASTX nr result

ID: Glycyrrhiza24_contig00013129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013129
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   332   5e-89
gb|ACU17851.1| unknown [Glycine max]                                  332   6e-89
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc...   330   3e-88
ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   315   1e-83
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   287   2e-75

>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score =  332 bits (852), Expect = 5e-89
 Identities = 180/272 (66%), Positives = 191/272 (70%), Gaps = 2/272 (0%)
 Frame = -1

Query: 812 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 633
           MASLGNPK+WVPYMNNKDCSQGFCS YCPQWCYV+YPPPPP    FEFPDDD  S+PNFS
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPP----FEFPDDD--SSPNFS 54

Query: 632 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXNPSLLHEPW 453
           PLVIA+IG+  SAFLLVSYY IISKYCG                       NPSL HEPW
Sbjct: 55  PLVIAVIGVLVSAFLLVSYYTIISKYCGS---RESSQSENHEENVELEEDHNPSL-HEPW 110

Query: 452 HDVSTNGLDEALIKSITVCKYKKGDGLVEVTDCSVCLNEFQDGESVRLLPKCSHAFHLPC 273
           H   T GLDEALIKSITVCKYKKGDGLVEVTDCSVCL+EFQD ESVRLLPKCSHAFHLPC
Sbjct: 111 H-APTIGLDEALIKSITVCKYKKGDGLVEVTDCSVCLSEFQDDESVRLLPKCSHAFHLPC 169

Query: 272 IDTWLKSHSSCPLCRXXXXXXXXXXXXXXXXXXPVIELPSTNEVSSESSHFDENVAVVGR 93
           IDTWLKSHSSCPLCR                  PV E PS N+ SS +   DEN+  V R
Sbjct: 170 IDTWLKSHSSCPLCR---ASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVAR 226

Query: 92  DSELGVVEEEI--VHGRAVPIPKSTNALRAFS 3
           DSEL  VE E+   HG AV    S +ALRA S
Sbjct: 227 DSELDAVEGEVTLTHGGAV----SKSALRALS 254


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score =  332 bits (851), Expect = 6e-89
 Identities = 180/272 (66%), Positives = 190/272 (69%), Gaps = 2/272 (0%)
 Frame = -1

Query: 812 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 633
           MASLGNPK+WVPYMNNKDCSQGFCS YCPQWCYV+YPPPPP    FEFPDDD  S+PNFS
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPP----FEFPDDD--SSPNFS 54

Query: 632 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXNPSLLHEPW 453
           PLVIA+IG+  SAFLLVSYY IISKYCG                       NPSL HEPW
Sbjct: 55  PLVIAVIGVLVSAFLLVSYYTIISKYCGS---RESSQSENHEENVELEEDHNPSL-HEPW 110

Query: 452 HDVSTNGLDEALIKSITVCKYKKGDGLVEVTDCSVCLNEFQDGESVRLLPKCSHAFHLPC 273
           H   T GLDEALIKSITVCKYKKGDGLVEVTDCSVCL EFQD ESVRLLPKCSHAFHLPC
Sbjct: 111 H-APTIGLDEALIKSITVCKYKKGDGLVEVTDCSVCLGEFQDDESVRLLPKCSHAFHLPC 169

Query: 272 IDTWLKSHSSCPLCRXXXXXXXXXXXXXXXXXXPVIELPSTNEVSSESSHFDENVAVVGR 93
           IDTWLKSHSSCPLCR                  PV E PS N+ SS +   DEN+  V R
Sbjct: 170 IDTWLKSHSSCPLCR---ASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVAR 226

Query: 92  DSELGVVEEEI--VHGRAVPIPKSTNALRAFS 3
           DSEL  VE E+   HG AV    S +ALRA S
Sbjct: 227 DSELDAVEGEVTLTHGGAV----SKSALRALS 254


>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
           gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
           [Medicago truncatula]
          Length = 481

 Score =  330 bits (845), Expect = 3e-88
 Identities = 175/264 (66%), Positives = 189/264 (71%), Gaps = 2/264 (0%)
 Frame = -1

Query: 812 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 633
           MASLGNPKAWVPYMN+KDCSQGFCS YCPQWCY +YPPP P  S FEFPD+D  S+PNFS
Sbjct: 1   MASLGNPKAWVPYMNSKDCSQGFCSVYCPQWCYAIYPPPSP--SPFEFPDED--SSPNFS 56

Query: 632 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXNPSLLHEPW 453
           PLVIAIIGI ASAFLLV+YY IISKYCGR                      +   +HEPW
Sbjct: 57  PLVIAIIGILASAFLLVTYYTIISKYCGRRESSASESREANDEFEDDHHHHHNPSIHEPW 116

Query: 452 HDVSTNGLDEALIKSITVCKYKKGDGLVEVTDCSVCLNEFQDGESVRLLPKCSHAFHLPC 273
           H VSTNGLDE LIKSITVCKYKK DGLV+VTDCSVCLNEFQD ES+RLLPKCSHAFHLPC
Sbjct: 117 H-VSTNGLDETLIKSITVCKYKKNDGLVDVTDCSVCLNEFQDDESIRLLPKCSHAFHLPC 175

Query: 272 IDTWLKSHSSCPLCR--XXXXXXXXXXXXXXXXXXPVIELPSTNEVSSESSHFDENVAVV 99
           IDTWLKSHS+CPLCR                    PVIE PSTNEVS E+ H +E V  V
Sbjct: 176 IDTWLKSHSNCPLCRATIFAFNSSNSSAATLHLPAPVIENPSTNEVSLETQHPNE-VLDV 234

Query: 98  GRDSELGVVEEEIVHGRAVPIPKS 27
            RD+EL VVEE       VPIPK+
Sbjct: 235 ERDNELDVVEE-------VPIPKT 251


>ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 370

 Score =  315 bits (806), Expect = 1e-83
 Identities = 175/274 (63%), Positives = 185/274 (67%), Gaps = 4/274 (1%)
 Frame = -1

Query: 812 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 633
           MASLGNPK WVPYMNNKDCSQGFCS YCPQWCYV+YPPPPP    FEFP DD  S+PNFS
Sbjct: 1   MASLGNPKTWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPP--PPFEFPSDD--SSPNFS 56

Query: 632 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXNPSLLHEPW 453
           PLVIA+IG+ ASAFLLVSYY IISKYCG                       NPS  HEPW
Sbjct: 57  PLVIAVIGVLASAFLLVSYYTIISKYCGN--RESSQSEEHEENVELEEDDHNPSH-HEPW 113

Query: 452 HDVSTNGLDEALIKSITVCKYKKGDGLVEVTDCSVCLNEFQDGESVRLLPKCSHAFHLPC 273
           H  ST GLDEALIKSIT CKYKKGDGLVEVTDCSVCL+EF+D ESVRLLPKCSHAFHLPC
Sbjct: 114 H-ASTIGLDEALIKSITACKYKKGDGLVEVTDCSVCLSEFRDDESVRLLPKCSHAFHLPC 172

Query: 272 IDTWLKSHSSCPLCRXXXXXXXXXXXXXXXXXXPVIELPSTNEVSSESSHF-DENVAVVG 96
           IDTWLKSHSSCPLCR                   V E  S N+ +S + H  DENV  V 
Sbjct: 173 IDTWLKSHSSCPLCR--ASIFTFNAAAALHVAATVTEPTSRNDTTSGNRHADDENVVAVA 230

Query: 95  RDSELGVVEEEIV---HGRAVPIPKSTNALRAFS 3
            DSE   VE E V   HG AV    S +ALR  S
Sbjct: 231 GDSESDAVEGESVTLSHGGAV----SKSALRVLS 260


>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  287 bits (735), Expect = 2e-75
 Identities = 154/258 (59%), Positives = 173/258 (67%)
 Frame = -1

Query: 812 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 633
           M SLG+PK WVPY++ KDCSQGFCS YCPQWCY+  PPPP     FEFPD++  S PNFS
Sbjct: 1   MGSLGSPKIWVPYISTKDCSQGFCSLYCPQWCYIPAPPPP----YFEFPDEN--SGPNFS 54

Query: 632 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXNPSLLHEPW 453
           PLVIAIIGI ASAFLLVSYY IISKYCG                       +   LHEPW
Sbjct: 55  PLVIAIIGILASAFLLVSYYTIISKYCGN----MERERRENQDINEELEDNHNPALHEPW 110

Query: 452 HDVSTNGLDEALIKSITVCKYKKGDGLVEVTDCSVCLNEFQDGESVRLLPKCSHAFHLPC 273
           H V+T GLDEALIKSIT+CKYKKGDGLVE TDCSVCL+EF++ ES+RLLPKCSHAFH+ C
Sbjct: 111 H-VATTGLDEALIKSITLCKYKKGDGLVEGTDCSVCLSEFEEEESLRLLPKCSHAFHVQC 169

Query: 272 IDTWLKSHSSCPLCRXXXXXXXXXXXXXXXXXXPVIELPSTNEVSSESSHFDENVAVVGR 93
           IDTWLKSHS+CPLCR                  PV+E P  NE S +S    ENVA VG 
Sbjct: 170 IDTWLKSHSNCPLCR---ANIVPTTVSPTQLPPPVMESPLNNEPSQQSQLEHENVA-VGE 225

Query: 92  DSELGVVEEEIVHGRAVP 39
           D E    EEEI+    +P
Sbjct: 226 DLERVAEEEEIMRNEVIP 243


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