BLASTX nr result

ID: Glycyrrhiza24_contig00013093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013093
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   259   5e-67
ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   257   2e-66
ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi...   256   3e-66
ref|XP_002307793.1| cholesterol transport protein [Populus trich...   252   5e-65
ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   248   7e-64

>ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1257

 Score =  259 bits (661), Expect = 5e-67
 Identities = 137/167 (82%), Positives = 144/167 (86%)
 Frame = -2

Query: 721  ALVNLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLI 542
            ALVNLAIAIGAVFIVCLVIT SLWSS+IILLVLAMIVVDLMGVMAILNIQLNA+SVVNL+
Sbjct: 1086 ALVNLAIAIGAVFIVCLVITSSLWSSSIILLVLAMIVVDLMGVMAILNIQLNALSVVNLV 1145

Query: 541  MSVGIAVEFCVHMTHSFTVTSGDKDQRVKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 362
            MSVGIAVEFCVHMTHSFTV SGD+DQR KEALGTMGASVFSGITLTKLVGVIVLCFSRTE
Sbjct: 1146 MSVGIAVEFCVHMTHSFTVASGDRDQRAKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 1205

Query: 361  VFVIYYFQMYXXXXXXXXXXXXXXXXXXLSIFGPPSRCTVTEQGEDR 221
            VFVIYYF+MY                  LSIFGPPSRC++ EQ EDR
Sbjct: 1206 VFVIYYFRMYLSLVLLGFLHGLVFLPVVLSIFGPPSRCSIIEQEEDR 1252


>ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1283

 Score =  257 bits (656), Expect = 2e-66
 Identities = 132/167 (79%), Positives = 144/167 (86%)
 Frame = -2

Query: 721  ALVNLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLI 542
            AL+NLAIAIGAVFIVCL+ T SLWSS+IILLVLAMIVVDLMG+MAILNIQLNA+SVVNL+
Sbjct: 1112 ALINLAIAIGAVFIVCLIFTSSLWSSSIILLVLAMIVVDLMGLMAILNIQLNALSVVNLV 1171

Query: 541  MSVGIAVEFCVHMTHSFTVTSGDKDQRVKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 362
            MSVGIAVEFCVHMTHSFTV SGD+DQR KEALGTMGASVFSGITLTKLVGVIVLCFS+TE
Sbjct: 1172 MSVGIAVEFCVHMTHSFTVASGDRDQRAKEALGTMGASVFSGITLTKLVGVIVLCFSKTE 1231

Query: 361  VFVIYYFQMYXXXXXXXXXXXXXXXXXXLSIFGPPSRCTVTEQGEDR 221
            VFVIYYF+MY                  LS+FGPPSRC++ EQGEDR
Sbjct: 1232 VFVIYYFRMYLSLVLLGFLHGLVFLPVLLSVFGPPSRCSIIEQGEDR 1278


>ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
            gi|223551381|gb|EEF52867.1| hedgehog receptor, putative
            [Ricinus communis]
          Length = 1235

 Score =  256 bits (655), Expect = 3e-66
 Identities = 131/167 (78%), Positives = 146/167 (87%)
 Frame = -2

Query: 721  ALVNLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLI 542
            AL+NLAIAIGAVF+VCLVITCSLWSSAIILLVLAMIV+DLMGVMAILNIQLNAVSVVNL+
Sbjct: 1062 ALINLAIAIGAVFLVCLVITCSLWSSAIILLVLAMIVIDLMGVMAILNIQLNAVSVVNLV 1121

Query: 541  MSVGIAVEFCVHMTHSFTVTSGDKDQRVKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 362
            M+VGIAVEFCVH+TH+F+V+SGD+DQRVKEALGTMGASVFSGITLTKLVGV+VLCFSRTE
Sbjct: 1122 MAVGIAVEFCVHITHAFSVSSGDRDQRVKEALGTMGASVFSGITLTKLVGVLVLCFSRTE 1181

Query: 361  VFVIYYFQMYXXXXXXXXXXXXXXXXXXLSIFGPPSRCTVTEQGEDR 221
            VFV+YYFQMY                  LS+FGPPSRC + E+ EDR
Sbjct: 1182 VFVVYYFQMYLALVLLGFLHGLVFLPVVLSMFGPPSRCKLVEKPEDR 1228


>ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa]
            gi|222857242|gb|EEE94789.1| cholesterol transport protein
            [Populus trichocarpa]
          Length = 1274

 Score =  252 bits (644), Expect = 5e-65
 Identities = 129/167 (77%), Positives = 144/167 (86%)
 Frame = -2

Query: 721  ALVNLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLI 542
            AL+NLAIAIGAVF+VCLVITCSLW+SAIILLVLAMIVVDLMGVMAILNIQLNAVSVVNL+
Sbjct: 1101 ALINLAIAIGAVFVVCLVITCSLWNSAIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLV 1160

Query: 541  MSVGIAVEFCVHMTHSFTVTSGDKDQRVKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 362
            MSVGI VEFCVH+TH+F+V+ GD+DQRV++ALGTMGASVFSGITLTKLVGVIVLCFSRTE
Sbjct: 1161 MSVGIGVEFCVHITHAFSVSCGDRDQRVRDALGTMGASVFSGITLTKLVGVIVLCFSRTE 1220

Query: 361  VFVIYYFQMYXXXXXXXXXXXXXXXXXXLSIFGPPSRCTVTEQGEDR 221
            VFV+YYFQMY                  LS+FGPPSRC + E+ EDR
Sbjct: 1221 VFVVYYFQMYLALVLLGFLHGLVFLPVVLSMFGPPSRCKLVEKQEDR 1267


>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  248 bits (634), Expect = 7e-64
 Identities = 128/167 (76%), Positives = 145/167 (86%)
 Frame = -2

Query: 721  ALVNLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVMAILNIQLNAVSVVNLI 542
            AL+NLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVMAILNIQLNA+SVVNL+
Sbjct: 1136 ALINLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVMAILNIQLNALSVVNLV 1195

Query: 541  MSVGIAVEFCVHMTHSFTVTSGDKDQRVKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 362
            M+VGIAVEFCVH+TH+F+V+SGD++QR+KEALGTMGASVFSGITLTKLVGVIVLCFSRTE
Sbjct: 1196 MAVGIAVEFCVHITHAFSVSSGDRNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTE 1255

Query: 361  VFVIYYFQMYXXXXXXXXXXXXXXXXXXLSIFGPPSRCTVTEQGEDR 221
            VFV+YYFQMY                  LS+ GPPSRC + ++ ED+
Sbjct: 1256 VFVVYYFQMYLALVLLGFLHGLVFLPVVLSMCGPPSRCVLIDKREDQ 1302


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