BLASTX nr result

ID: Glycyrrhiza24_contig00013090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013090
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|2...   323   3e-86
ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein lig...   309   7e-82
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   301   2e-79
emb|CBI25234.3| unnamed protein product [Vitis vinifera]              277   3e-72

>ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|222846424|gb|EEE83971.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  323 bits (829), Expect = 3e-86
 Identities = 146/273 (53%), Positives = 190/273 (69%)
 Frame = +1

Query: 1   LQFQETLMASVITXXXXXXXXXXXXXXXXXXXXCVASSSKAVDVSLVVPKIELVGEEEAI 180
           LQFQETLM SVI                      ++     V++      I+L    EA 
Sbjct: 46  LQFQETLMGSVIVSQMKSIGPSPMMIEGIPVVLPISDQPMRVEI------IDL----EAG 95

Query: 181 ESLLIICEICVEPKESEEMFRSQRCDHSFCSECVTKHVATKIQESITVVSCPGLYCEGVL 360
           ES L  CEIC E KE+++MF+++ C HSFC++C+++HVATK+Q++I +V+CPGL C  VL
Sbjct: 96  ESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLSCRAVL 155

Query: 361 ELDACRPMLPNDLIERWDDALCEALFLSAPKFYCPFRDCSAMMLLXXXXXXXXXXIRESE 540
           E+D CRP+L   +I+RW++ALCE +  ++ +FYCPF+DCSA+++           IRESE
Sbjct: 156 EMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSALLV----DDNEGETIRESE 211

Query: 541 CPFCHRLFCARCHVPWHPGVCCEEFQTLNEDERGREDLLVRELANSKKWSRCPKCKFYVE 720
           CPFCHRLFCA+C VPWHPGV C+E+Q LNEDERGREDL+VRELA +K+W RCPKCKFYVE
Sbjct: 212 CPFCHRLFCAQCSVPWHPGVDCDEYQRLNEDERGREDLMVRELAKNKQWGRCPKCKFYVE 271

Query: 721 KAEGCLHITCRCRFEFCYACGNQWTSSHGGCQR 819
           + EGC H+ CRCRFEFCY C  QW  +HGGC R
Sbjct: 272 RTEGCPHMVCRCRFEFCYGCEEQWGPTHGGCTR 304


>ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|222874330|gb|EEF11461.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  323 bits (828), Expect = 4e-86
 Identities = 146/273 (53%), Positives = 189/273 (69%)
 Frame = +1

Query: 1   LQFQETLMASVITXXXXXXXXXXXXXXXXXXXXCVASSSKAVDVSLVVPKIELVGEEEAI 180
           LQFQETLM SVI                      ++     V++      I+L    EA 
Sbjct: 46  LQFQETLMGSVIVSQMKSIGPSPMMIEGIPVVLPISDQPMRVEI------IDL----EAG 95

Query: 181 ESLLIICEICVEPKESEEMFRSQRCDHSFCSECVTKHVATKIQESITVVSCPGLYCEGVL 360
           ES L  CEIC E KE+++MF+++ C HSFC++C+++HVATK+Q++I +V+CPGL C  VL
Sbjct: 96  ESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLSCRAVL 155

Query: 361 ELDACRPMLPNDLIERWDDALCEALFLSAPKFYCPFRDCSAMMLLXXXXXXXXXXIRESE 540
           E+D CRP+L   +I+RW++ALCE +  ++ +FYCPF+DCSA+++           IRESE
Sbjct: 156 EMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSALLV----DDNEGETIRESE 211

Query: 541 CPFCHRLFCARCHVPWHPGVCCEEFQTLNEDERGREDLLVRELANSKKWSRCPKCKFYVE 720
           CPFCHRLFCA+C VPWHPGV C+E+Q LNEDERGREDL+VRELA  K+W RCPKCKFYVE
Sbjct: 212 CPFCHRLFCAQCSVPWHPGVDCDEYQRLNEDERGREDLMVRELAKDKQWGRCPKCKFYVE 271

Query: 721 KAEGCLHITCRCRFEFCYACGNQWTSSHGGCQR 819
           + EGC H+ CRCRFEFCY C  QW  +HGGC R
Sbjct: 272 RTEGCPHMVCRCRFEFCYGCEEQWGPTHGGCTR 304


>ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Vitis
           vinifera] gi|298204735|emb|CBI25233.3| unnamed protein
           product [Vitis vinifera]
          Length = 301

 Score =  309 bits (791), Expect = 7e-82
 Identities = 144/272 (52%), Positives = 185/272 (68%)
 Frame = +1

Query: 1   LQFQETLMASVITXXXXXXXXXXXXXXXXXXXXCVASSSKAVDVSLVVPKIELVGEEEAI 180
           LQFQE LMASV                        + SS A D ++ +  +E   E +  
Sbjct: 41  LQFQEALMASVEAASNTAVQETAPSIKEIGSS---SGSSSAADAAVDMAVVE---EGQTS 94

Query: 181 ESLLIICEICVEPKESEEMFRSQRCDHSFCSECVTKHVATKIQESITVVSCPGLYCEGVL 360
           E+    CEIC E +  +EMFRS +C H+FCS C++KHVA KIQES+ +V+CP L CEGVL
Sbjct: 95  ENF---CEICAERRGLDEMFRSGKCCHTFCSYCISKHVAVKIQESVRMVTCPALSCEGVL 151

Query: 361 ELDACRPMLPNDLIERWDDALCEALFLSAPKFYCPFRDCSAMMLLXXXXXXXXXXIRESE 540
           E+D CR ++  +++E+W++  CE++  ++ +FYCPFRDCSAM++           IRESE
Sbjct: 152 EVDDCRGIVAREVMEKWEEVSCESIIAASQRFYCPFRDCSAMLV----DDNGGEVIRESE 207

Query: 541 CPFCHRLFCARCHVPWHPGVCCEEFQTLNEDERGREDLLVRELANSKKWSRCPKCKFYVE 720
           CP C RLFCA C+VPWH GV CEE+Q +NEDE+GREDL++RELA  KKW RCP+CKFYVE
Sbjct: 208 CPVCRRLFCAACYVPWHSGVGCEEYQMMNEDEKGREDLMLRELAQEKKWRRCPQCKFYVE 267

Query: 721 KAEGCLHITCRCRFEFCYACGNQWTSSHGGCQ 816
           K EGCLHITCRC ++FCYACG QWT  HGGCQ
Sbjct: 268 KIEGCLHITCRCTYQFCYACGAQWTQHHGGCQ 299


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
           gi|223547790|gb|EEF49282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 308

 Score =  301 bits (770), Expect = 2e-79
 Identities = 142/274 (51%), Positives = 177/274 (64%)
 Frame = +1

Query: 1   LQFQETLMASVITXXXXXXXXXXXXXXXXXXXXCVASSSKAVDVSLVVPKIELVGEEEAI 180
           LQFQE LM SV+                        SS   ++   VVP        E  
Sbjct: 45  LQFQEALMGSVMISQMKNSITTATIINTCKISN--PSSLLMIEPPPVVPN----SPTETG 98

Query: 181 ESLLIICEICVEPKESEEMFRSQRCDHSFCSECVTKHVATKIQESITVVSCPGLYCEGVL 360
           +S  I CEICVE KE+++MF +  C HSFC +CV K+V TKIQES T+V+CPG+ C  VL
Sbjct: 99  QSSQIFCEICVEKKETDQMFATDSCIHSFCLDCVGKYVGTKIQESQTIVTCPGMNCRAVL 158

Query: 361 ELDACRPMLPNDLIERWDDALCEALFLSAPKFYCPFRDCSAMMLLXXXXXXXXXXIRESE 540
           ELD CR  L   +I+ W++ALC+ +  +   FYCPFRDCSA+++           IRESE
Sbjct: 159 ELDICRTKLAKGVIDSWEEALCKEMISTLQSFYCPFRDCSALLV----NDNEGEVIRESE 214

Query: 541 CPFCHRLFCARCHVPWHPGVCCEEFQTLNEDERGREDLLVRELANSKKWSRCPKCKFYVE 720
           CPFCHRLFCA+C+VPWH G+ CE FQ LNEDERGREDL+V ELA  KKWSRCPKC+FYVE
Sbjct: 215 CPFCHRLFCAQCYVPWHSGIECEAFQRLNEDERGREDLMVIELAKEKKWSRCPKCRFYVE 274

Query: 721 KAEGCLHITCRCRFEFCYACGNQWTSSHGGCQRN 822
           + +GC H+ CRC F+FCY C  +WT +HGGC +N
Sbjct: 275 RTQGCPHMVCRCGFQFCYGCELEWTGNHGGCHKN 308


>emb|CBI25234.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  277 bits (708), Expect = 3e-72
 Identities = 116/207 (56%), Positives = 150/207 (72%)
 Frame = +1

Query: 196 ICEICVEPKESEEMFRSQRCDHSFCSECVTKHVATKIQESITVVSCPGLYCEGVLELDAC 375
           +CEIC E KES  MFR++ C HS C++C++KHV  KI+ +  ++ CPG+ C GVL+ + C
Sbjct: 108 MCEICCERKESTGMFRNEGCRHSVCTDCISKHVEVKIESNSGMILCPGMDCRGVLDPERC 167

Query: 376 RPMLPNDLIERWDDALCEALFLSAPKFYCPFRDCSAMMLLXXXXXXXXXXIRESECPFCH 555
           R  LP  ++ERW+ A+ E L L + KFYCPF+DCSAM+L           +RESECP C 
Sbjct: 168 RGFLPKTVVERWEKAIIETLILDSEKFYCPFKDCSAMLL--NDNAEAVMMMRESECPHCR 225

Query: 556 RLFCARCHVPWHPGVCCEEFQTLNEDERGREDLLVRELANSKKWSRCPKCKFYVEKAEGC 735
           RLFC +C VPWH G+ C E Q LN DERGRED+L+++LA  KKW RCP+CKFYVEK EGC
Sbjct: 226 RLFCVQCRVPWHSGMECREVQRLNADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGC 285

Query: 736 LHITCRCRFEFCYACGNQWTSSHGGCQ 816
           +H+TCRC FEFCY CG +W+ +HG CQ
Sbjct: 286 VHLTCRCGFEFCYRCGGKWSVNHGTCQ 312


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