BLASTX nr result

ID: Glycyrrhiza24_contig00013088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013088
         (1923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536622.1| PREDICTED: cyclin-D3-1-like isoform 1 [Glyci...   454   e-125
ref|NP_001237151.1| cyclin d3 [Glycine max] gi|42362319|gb|AAS13...   453   e-125
emb|CAB40540.1| cyclin D3 [Medicago sativa]                           439   e-120
emb|CAA61334.1| cyclin [Medicago sativa]                              438   e-120
gb|AFK45806.1| unknown [Lotus japonicus]                              431   e-118

>ref|XP_003536622.1| PREDICTED: cyclin-D3-1-like isoform 1 [Glycine max]
          Length = 402

 Score =  454 bits (1169), Expect = e-125
 Identities = 265/417 (63%), Positives = 283/417 (67%), Gaps = 5/417 (1%)
 Frame = -1

Query: 1716 MAIXXXXXXXXXNENVSSVLDALYCDXXXXXXXXXXXXXXXXXXXXXXSDVXXXXXXXXX 1537
            MAI         NENVSSVLDALYCD                       +          
Sbjct: 1    MAIQHHNDQLEHNENVSSVLDALYCDEGKWEEEEEEKEEEEDEG-----ENESEVTTNTA 55

Query: 1536 XXXXXXXXLEQDLFWEDEELNSLFSKENIQ-QQAYH----DXXXXXXXXXXXXXXXXXXX 1372
                    LEQDLFWEDEELNS+FSKE +Q ++AY     +                   
Sbjct: 56   TCLFPLLLLEQDLFWEDEELNSIFSKEKVQHEEAYGYNNLNSDDDNNNNNNTSNNNVHLD 115

Query: 1371 XSFSDPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCI 1192
               S PRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCI
Sbjct: 116  SCLSQPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCI 175

Query: 1191 SLAAKVEETXXXXXXXXXXXDTKYVFEAKTIQRMELVVLSTLKWKMHPVTPLSFLDHIIR 1012
            SLAAKVEET           DTKY+FEAKTIQRMEL+VLSTLKWKMHPVTPLSFLDHIIR
Sbjct: 176  SLAAKVEETQVPLLLDLQVQDTKYLFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIR 235

Query: 1011 RLGLKTNLHWEFLRRCENLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEQSSDGVEYKN 832
            RLGL+T+LHWEFLRRCE+LLLSVLLDSRFVGCLPSVLATATMLHVIDQI Q S G+EYK 
Sbjct: 236  RLGLRTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQI-QHSGGIEYKT 294

Query: 831  QLLGVLKISKEKVDECYNAILQLSXXXXXXXXXXXXNPSGKRKYEQIPGSPSGVIDAAAF 652
            QLL VLKISKEKVDECYNAILQLS              + KRKYEQIP SPSGVIDAA  
Sbjct: 295  QLLSVLKISKEKVDECYNAILQLSKANKYGHNNINN--TSKRKYEQIPSSPSGVIDAAFC 352

Query: 651  SSDDGSNDSWAVAVVGXXXXXXXXXSEPVFKKSKTQGQKLKLSPLNRVIVGIVGASP 481
            S  DGSNDSWAV              EP+FKKS+TQGQ++ LSPL R I+GIVG SP
Sbjct: 353  S--DGSNDSWAVG-----SSLLYSPPEPLFKKSRTQGQQMNLSPLKRFIIGIVGTSP 402


>ref|NP_001237151.1| cyclin d3 [Glycine max] gi|42362319|gb|AAS13371.1| cyclin d3 [Glycine
            max]
          Length = 396

 Score =  453 bits (1166), Expect = e-125
 Identities = 263/416 (63%), Positives = 280/416 (67%), Gaps = 4/416 (0%)
 Frame = -1

Query: 1716 MAIXXXXXXXXXNENVSSVLDALYCDXXXXXXXXXXXXXXXXXXXXXXSDVXXXXXXXXX 1537
            MAI         NENVSSVLDALYCD                      +           
Sbjct: 1    MAIQHHNEQLEHNENVSSVLDALYCDEGKWEDEEEEEEXYEESEVTTNTGTSLFPLLML- 59

Query: 1536 XXXXXXXXLEQDLFWEDEELNSLFSKENIQQQAYHDXXXXXXXXXXXXXXXXXXXXS--- 1366
                     EQDLFWEDEELNSLFSKE +Q +  +D                        
Sbjct: 60   ---------EQDLFWEDEELNSLFSKEKVQHEEAYDYNNLNSDDNSNDHSNNNNNVLSDS 110

Query: 1365 -FSDPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCIS 1189
              S PRREAVEW+LKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCIS
Sbjct: 111  CLSQPRREAVEWILKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCIS 170

Query: 1188 LAAKVEETXXXXXXXXXXXDTKYVFEAKTIQRMELVVLSTLKWKMHPVTPLSFLDHIIRR 1009
            LAAKVEET           DTKYVFEAKTIQRMEL+VLSTLKWKMHPVTPLSFLDHIIRR
Sbjct: 171  LAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRR 230

Query: 1008 LGLKTNLHWEFLRRCENLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEQSSDGVEYKNQ 829
            LGLKT+LHWEFLRRCE+LLLSVLLDSRFVGCLPSVLATATMLHVIDQI+ +  G+EYK Q
Sbjct: 231  LGLKTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIKHNG-GMEYKTQ 289

Query: 828  LLGVLKISKEKVDECYNAILQLSXXXXXXXXXXXXNPSGKRKYEQIPGSPSGVIDAAAFS 649
            LL VLKISKEKVDECYNAILQLS              + KRKYEQIP SPSGVIDAA  S
Sbjct: 290  LLSVLKISKEKVDECYNAILQLSKANKYGHNNINN--TSKRKYEQIPSSPSGVIDAAFCS 347

Query: 648  SDDGSNDSWAVAVVGXXXXXXXXXSEPVFKKSKTQGQKLKLSPLNRVIVGIVGASP 481
              DGSNDSWAV              EP+FKKS+TQGQ++ LSPL R I+GIVG  P
Sbjct: 348  --DGSNDSWAVG-----SSLLYSPPEPLFKKSRTQGQQMNLSPLKRFIIGIVGTPP 396


>emb|CAB40540.1| cyclin D3 [Medicago sativa]
          Length = 378

 Score =  439 bits (1129), Expect = e-120
 Identities = 243/343 (70%), Positives = 260/343 (75%), Gaps = 1/343 (0%)
 Frame = -1

Query: 1509 EQDLFWEDEELNSLFSKENIQQQAYHDXXXXXXXXXXXXXXXXXXXXSFSDPRREAVEWM 1330
            EQ+LF EDEELN+LFSKE IQQ+ Y++                      S PRREAVEWM
Sbjct: 61   EQNLFNEDEELNTLFSKEKIQQETYYEDLKNVINFDS-----------LSQPRREAVEWM 109

Query: 1329 LKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETXXXXX 1150
            LKVNAHYGFSALTATLAV YLDRFLLSFHFQ+EKPWMIQLVAVTCISLAAKVEET     
Sbjct: 110  LKVNAHYGFSALTATLAVNYLDRFLLSFHFQKEKPWMIQLVAVTCISLAAKVEETQVPLL 169

Query: 1149 XXXXXXDTKYVFEAKTIQRMELVVLSTLKWKMHPVTPLSFLDHIIRRLGLKTNLHWEFLR 970
                  DTKYVFEAKTIQRMEL++LSTLKWKMHPVT  SFLDHIIRRLGLKTNLHWEFLR
Sbjct: 170  LDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIRRLGLKTNLHWEFLR 229

Query: 969  RCENLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEQSSD-GVEYKNQLLGVLKISKEKV 793
            RCENLLLSVLLDSRFVGC+PSVLATATMLHVIDQIEQS D GV+YKNQLL VLK SKEKV
Sbjct: 230  RCENLLLSVLLDSRFVGCVPSVLATATMLHVIDQIEQSDDHGVDYKNQLLNVLKTSKEKV 289

Query: 792  DECYNAILQLSXXXXXXXXXXXXNPSGKRKYEQIPGSPSGVIDAAAFSSDDGSNDSWAVA 613
            DECYNAIL L+                KRKYE+IPGSPSGVID A FSS DGSNDSW V 
Sbjct: 290  DECYNAILHLTNANNY---------GHKRKYEEIPGSPSGVID-AVFSS-DGSNDSWTVG 338

Query: 612  VVGXXXXXXXXXSEPVFKKSKTQGQKLKLSPLNRVIVGIVGAS 484
                        SEPVFKK+K QGQ + LSP+NRVIVGI+  +
Sbjct: 339  A------SSYSTSEPVFKKTKNQGQNMNLSPINRVIVGILATA 375


>emb|CAA61334.1| cyclin [Medicago sativa]
          Length = 386

 Score =  438 bits (1126), Expect = e-120
 Identities = 243/343 (70%), Positives = 260/343 (75%), Gaps = 1/343 (0%)
 Frame = -1

Query: 1509 EQDLFWEDEELNSLFSKENIQQQAYHDXXXXXXXXXXXXXXXXXXXXSFSDPRREAVEWM 1330
            EQ+LF EDEELN+LFSKE  QQ+ Y++                      S PRREAVEWM
Sbjct: 69   EQNLFNEDEELNTLFSKEITQQETYYEDLKNVINFDS-----------LSQPRREAVEWM 117

Query: 1329 LKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETXXXXX 1150
            LKVNAHYGFSALTATLAV YLDRFLLSFHFQ+EKPWMIQLVAVTCISLAAKVEET     
Sbjct: 118  LKVNAHYGFSALTATLAVNYLDRFLLSFHFQKEKPWMIQLVAVTCISLAAKVEETQVPLL 177

Query: 1149 XXXXXXDTKYVFEAKTIQRMELVVLSTLKWKMHPVTPLSFLDHIIRRLGLKTNLHWEFLR 970
                  DTKYVFEAKTIQRMEL++LSTLKWKMHPVT  SFLDHIIRRLGLKTNLHWEFLR
Sbjct: 178  LDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIRRLGLKTNLHWEFLR 237

Query: 969  RCENLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEQSSD-GVEYKNQLLGVLKISKEKV 793
            RCENLLLSVLLDSRFVGC+PSVLATATMLHVIDQIEQS D GV+YKNQLL VLKISKEKV
Sbjct: 238  RCENLLLSVLLDSRFVGCVPSVLATATMLHVIDQIEQSDDNGVDYKNQLLNVLKISKEKV 297

Query: 792  DECYNAILQLSXXXXXXXXXXXXNPSGKRKYEQIPGSPSGVIDAAAFSSDDGSNDSWAVA 613
            DECYNAIL L+                KRKYE+IPGSPSGVID A FSS DGSNDSW V 
Sbjct: 298  DECYNAILHLTNANNY---------GHKRKYEEIPGSPSGVID-AVFSS-DGSNDSWTVG 346

Query: 612  VVGXXXXXXXXXSEPVFKKSKTQGQKLKLSPLNRVIVGIVGAS 484
                        SEPVFKK+K QGQ + LSP+NRVIVGI+  +
Sbjct: 347  A------SSYSTSEPVFKKTKNQGQNMNLSPINRVIVGILATA 383


>gb|AFK45806.1| unknown [Lotus japonicus]
          Length = 390

 Score =  431 bits (1107), Expect = e-118
 Identities = 254/400 (63%), Positives = 273/400 (68%), Gaps = 1/400 (0%)
 Frame = -1

Query: 1677 ENVSSVLDALYCDXXXXXXXXXXXXXXXXXXXXXXSDVXXXXXXXXXXXXXXXXXLEQDL 1498
            ENVSSVLDALYCD                       DV                 LEQDL
Sbjct: 19   ENVSSVLDALYCDEEKWEEEEVEQVVGELSEEETS-DVTTNNDPNNTCSLFPLLLLEQDL 77

Query: 1497 FWEDEELNSLFSKENIQQQAYHDXXXXXXXXXXXXXXXXXXXXSFSDPRREAVEWMLKVN 1318
            FWEDEELNSLFSKE IQ Q Y++                      S PR EAV+WMLKVN
Sbjct: 78   FWEDEELNSLFSKEKIQHQNYYNDVNSDPF--------------LSQPRHEAVKWMLKVN 123

Query: 1317 AHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETXXXXXXXXX 1138
            AHYGFSALTATLAVTY D FLLSFHFQ EKPWMIQL AVTCISLAAKVEET         
Sbjct: 124  AHYGFSALTATLAVTYFDNFLLSFHFQSEKPWMIQLAAVTCISLAAKVEETQVPLLLDLQ 183

Query: 1137 XXDTKYVFEAKTIQRMELVVLSTLKWKMHPVTPLSFLDHIIRRLGLKTNLHWEFLRRCEN 958
              D K+VFEAKTI +MEL+VLSTLKWKMHPVTPLSFLDHIIRRLGLKT+LHWEFLRRCE+
Sbjct: 184  VQDAKFVFEAKTILKMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEH 243

Query: 957  LLLSVLLDSRFVGCLPSVLATATMLHVIDQIEQSSDGVEYKNQLLGVLKISKEKVDECYN 778
            LLLSVLLDSRFVG LPSVLATATMLHVIDQIE+ SDGVEYK QLLGVLKI+K KVDECY+
Sbjct: 244  LLLSVLLDSRFVGVLPSVLATATMLHVIDQIEK-SDGVEYKKQLLGVLKINKGKVDECYD 302

Query: 777  AILQLSXXXXXXXXXXXXNPSGKRKYEQ-IPGSPSGVIDAAAFSSDDGSNDSWAVAVVGX 601
            A+L+L+                KRKYE+ IPGSPSGVID AAF+S DGSNDSW    VG 
Sbjct: 303  AMLELTNANDYDDNKKL----NKRKYEEIIPGSPSGVID-AAFNS-DGSNDSW---TVGS 353

Query: 600  XXXXXXXXSEPVFKKSKTQGQKLKLSPLNRVIVGIVGASP 481
                      P+FKKS+TQ   +KLSPLNRVIVGIV  SP
Sbjct: 354  SLFSSSGPESPLFKKSRTQ---MKLSPLNRVIVGIVSTSP 390


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