BLASTX nr result

ID: Glycyrrhiza24_contig00013049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013049
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like ...   571   e-160
ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like ...   571   e-160
ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...   551   e-155
ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...   546   e-153
ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein...   441   e-121

>ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
            truncatula] gi|355503531|gb|AES84734.1| Sister chromatid
            cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 992

 Score =  571 bits (1471), Expect = e-160
 Identities = 296/409 (72%), Positives = 333/409 (81%), Gaps = 2/409 (0%)
 Frame = +3

Query: 3    DANSLTIYPEYILPYLVHALAHNSCPNVEECKDVGAYDTIYRQLHLILSMLLQRDEGPKS 182
            DANS  IYPEYILPYLVHALAHNSCPNVEECKDVGAYD IYRQLHLILS+LLQRDEG KS
Sbjct: 297  DANSFPIYPEYILPYLVHALAHNSCPNVEECKDVGAYDNIYRQLHLILSILLQRDEGAKS 356

Query: 183  EVTTDKEKEVISTVNSIFRNIKLSEDMVDTSKTQNSHAICDLGLAITKRLVQKDVDLQEL 362
            E TT+KEKE++ST+ SIF++IKLSED +DTSKT+NSHA+CDLGLAITK+LVQKDVD+QEL
Sbjct: 357  EETTNKEKEILSTIISIFQSIKLSEDTIDTSKTKNSHAMCDLGLAITKKLVQKDVDVQEL 416

Query: 363  SHLVSLPPMLYKASEKKEGDDTMVSDVKSWLADDTTLTHFESLELEVVQSQLA--EASKD 536
            SHL+SLPPMLYKA EKKEG+ T+VS+VKSWL DD +L H ESLELE+VQSQL   EASKD
Sbjct: 417  SHLLSLPPMLYKAFEKKEGNGTVVSEVKSWLVDDISLAHLESLELEMVQSQLVEDEASKD 476

Query: 537  NEDGNEIPLGKMLKHXXXXXXXXXXXXXXXXXPAETKMIENDFDILNMVRQINSDNLGTS 716
            NE+   + LG MLK                  P+ET+ +ENDF ILNMVRQ + DN+G+S
Sbjct: 477  NEE--NVTLGVMLKQIKSQGICGKKVKKIKPVPSETEKVENDFAILNMVRQADLDNVGSS 534

Query: 717  TNVEPSNGHEHSLSKKTLNDPEHATGQKRKTGETTPVPVPKRRRSSSAYGKLRLSTSTLK 896
            TNVE  NGHEHSLS KT   PEHATG+KRKT ETTP PV KR  SSSA+GK RLST+TL 
Sbjct: 535  TNVETCNGHEHSLSTKTPKVPEHATGRKRKTDETTPAPVSKRSSSSSAHGKPRLSTTTLN 594

Query: 897  ASRRVSGENSPGAKSLLDAEINSDTDSKTMERIMAKDLLVSSLKQKVKGSESFHNDESNK 1076
            ASRRVSGENSP     LDAEIN DTDS+TMERIM KDLLVSSLKQK KGSES HNDESNK
Sbjct: 595  ASRRVSGENSPEENLRLDAEINPDTDSETMERIMVKDLLVSSLKQKFKGSESHHNDESNK 654

Query: 1077 HDEHDMKSPDDLEQSDKTAYDNSKSSIRSTKKWKRKSIAGLTKCTTKEG 1223
            HD++DMKSPDDLEQ++KT  +NSKS    +KK KRK +AGLTKC  K G
Sbjct: 655  HDDYDMKSPDDLEQNEKTLSNNSKSPTCFSKKTKRKRVAGLTKCAMKRG 703


>ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
            truncatula] gi|355503530|gb|AES84733.1| Sister chromatid
            cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 995

 Score =  571 bits (1471), Expect = e-160
 Identities = 296/409 (72%), Positives = 333/409 (81%), Gaps = 2/409 (0%)
 Frame = +3

Query: 3    DANSLTIYPEYILPYLVHALAHNSCPNVEECKDVGAYDTIYRQLHLILSMLLQRDEGPKS 182
            DANS  IYPEYILPYLVHALAHNSCPNVEECKDVGAYD IYRQLHLILS+LLQRDEG KS
Sbjct: 297  DANSFPIYPEYILPYLVHALAHNSCPNVEECKDVGAYDNIYRQLHLILSILLQRDEGAKS 356

Query: 183  EVTTDKEKEVISTVNSIFRNIKLSEDMVDTSKTQNSHAICDLGLAITKRLVQKDVDLQEL 362
            E TT+KEKE++ST+ SIF++IKLSED +DTSKT+NSHA+CDLGLAITK+LVQKDVD+QEL
Sbjct: 357  EETTNKEKEILSTIISIFQSIKLSEDTIDTSKTKNSHAMCDLGLAITKKLVQKDVDVQEL 416

Query: 363  SHLVSLPPMLYKASEKKEGDDTMVSDVKSWLADDTTLTHFESLELEVVQSQLA--EASKD 536
            SHL+SLPPMLYKA EKKEG+ T+VS+VKSWL DD +L H ESLELE+VQSQL   EASKD
Sbjct: 417  SHLLSLPPMLYKAFEKKEGNGTVVSEVKSWLVDDISLAHLESLELEMVQSQLVEDEASKD 476

Query: 537  NEDGNEIPLGKMLKHXXXXXXXXXXXXXXXXXPAETKMIENDFDILNMVRQINSDNLGTS 716
            NE+   + LG MLK                  P+ET+ +ENDF ILNMVRQ + DN+G+S
Sbjct: 477  NEE--NVTLGVMLKQIKSQGICGKKVKKIKPVPSETEKVENDFAILNMVRQADLDNVGSS 534

Query: 717  TNVEPSNGHEHSLSKKTLNDPEHATGQKRKTGETTPVPVPKRRRSSSAYGKLRLSTSTLK 896
            TNVE  NGHEHSLS KT   PEHATG+KRKT ETTP PV KR  SSSA+GK RLST+TL 
Sbjct: 535  TNVETCNGHEHSLSTKTPKVPEHATGRKRKTDETTPAPVSKRSSSSSAHGKPRLSTTTLN 594

Query: 897  ASRRVSGENSPGAKSLLDAEINSDTDSKTMERIMAKDLLVSSLKQKVKGSESFHNDESNK 1076
            ASRRVSGENSP     LDAEIN DTDS+TMERIM KDLLVSSLKQK KGSES HNDESNK
Sbjct: 595  ASRRVSGENSPEENLRLDAEINPDTDSETMERIMVKDLLVSSLKQKFKGSESHHNDESNK 654

Query: 1077 HDEHDMKSPDDLEQSDKTAYDNSKSSIRSTKKWKRKSIAGLTKCTTKEG 1223
            HD++DMKSPDDLEQ++KT  +NSKS    +KK KRK +AGLTKC  K G
Sbjct: 655  HDDYDMKSPDDLEQNEKTLSNNSKSPTCFSKKTKRKRVAGLTKCAMKRG 703


>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1641

 Score =  551 bits (1421), Expect = e-155
 Identities = 298/414 (71%), Positives = 329/414 (79%), Gaps = 7/414 (1%)
 Frame = +3

Query: 3    DANSLTIYPEYILPYLVHALAHNSCPNVEECKDVGAYDTIYRQLHLILSMLLQRDEGPKS 182
            DANSLT YPEYILPYLVHALAHNSCPNV+ CKDVGAYD IYRQLHLILSMLLQRDE  KS
Sbjct: 950  DANSLTTYPEYILPYLVHALAHNSCPNVDYCKDVGAYDDIYRQLHLILSMLLQRDEDAKS 1009

Query: 183  EVTTDKEKEVISTVNSIFRNIKLSEDMVDTSKTQNSHAICDLGLAITKRLVQKDVDLQEL 362
            EVTTDKEKEVIST+ SIF  IK SED+VDTSK++NSHA+C+LGLAITKRLVQKDVD Q L
Sbjct: 1010 EVTTDKEKEVISTITSIFLRIKHSEDVVDTSKSKNSHALCELGLAITKRLVQKDVDFQGL 1069

Query: 363  SHLVSLPPMLYKASEKKEGDDTMVSDVKSWLADDTTLTHFESLELEVVQSQLA--EASKD 536
            SHLVSLPP+LYKASE KEGDDT+V++VKSWLAD++ LTHFESLELE VQSQ A  EASKD
Sbjct: 1070 SHLVSLPPLLYKASE-KEGDDTLVTEVKSWLADESALTHFESLELETVQSQSAEDEASKD 1128

Query: 537  NE-DGNEIPLGKMLKHXXXXXXXXXXXXXXXXXPAETKMIENDFDILNMVRQINSDNLGT 713
            +E DGNEIPL KMLK+                 PAETK   NDFDILNMVR+IN DNLGT
Sbjct: 1129 DEKDGNEIPLRKMLKNIKSQGTSGKKVKRNKSVPAETKKTGNDFDILNMVREINVDNLGT 1188

Query: 714  STNVEPSNGHEHSLSKKTLNDPEHATGQKRKTGETTPVPVPKRRRSSSAYGKLRLSTSTL 893
             TN EPSNGH+HSL KK L DPE+ATG+KRK  +TTPVPVPKRRRSSSA+GKLRLSTS  
Sbjct: 1189 PTNFEPSNGHDHSLIKKELKDPEYATGKKRKASKTTPVPVPKRRRSSSAHGKLRLSTSIS 1248

Query: 894  KASRRVSGENSPGAKSLLDAEINSDTDSKTMERIMA----KDLLVSSLKQKVKGSESFHN 1061
            KASRRVSG +SP  K  LD E+N D DSKTM+R M     KDLL+SSLK+KVKGS+S+HN
Sbjct: 1249 KASRRVSGVDSPQPKLPLDEEVNPDADSKTMQRKMVKGSEKDLLLSSLKRKVKGSDSYHN 1308

Query: 1062 DESNKHDEHDMKSPDDLEQSDKTAYDNSKSSIRSTKKWKRKSIAGLTKCTTKEG 1223
                          DD +QSDKT   N+KSS  STKK KRKSI+GL KCTTKEG
Sbjct: 1309 --------------DDTQQSDKTVGKNNKSSTGSTKKGKRKSISGLAKCTTKEG 1348


>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1642

 Score =  546 bits (1407), Expect = e-153
 Identities = 294/414 (71%), Positives = 331/414 (79%), Gaps = 7/414 (1%)
 Frame = +3

Query: 3    DANSLTIYPEYILPYLVHALAHNSCPNVEECKDVGAYDTIYRQLHLILSMLLQRDEGPKS 182
            DANSL  YPEYILPYLVHALAHNSCPNV++C+DVGAYD IYRQLHLILSMLLQR+E  KS
Sbjct: 950  DANSLITYPEYILPYLVHALAHNSCPNVDDCEDVGAYDDIYRQLHLILSMLLQREEDAKS 1009

Query: 183  EVTTDKEKEVISTVNSIFRNIKLSEDMVDTSKTQNSHAICDLGLAITKRLVQKDVDLQEL 362
            EVTTDKEKE+IST+ SIF +IK SEDMVDTSK++NSHA+C+LGLAITKRLVQKDVDLQ L
Sbjct: 1010 EVTTDKEKELISTITSIFLSIKHSEDMVDTSKSKNSHALCELGLAITKRLVQKDVDLQGL 1069

Query: 363  SHLVSLPPMLYKASEKKEGDDTMVSDVKSWLADDTTLTHFESLELEVVQSQLA--EASKD 536
            SHLVSLPP+LYKASE KEGDDT+V++VKSWLAD+++LTHFESLELE+VQSQ A  EASK+
Sbjct: 1070 SHLVSLPPLLYKASE-KEGDDTLVTEVKSWLADESSLTHFESLELEMVQSQSAEDEASKE 1128

Query: 537  NE-DGNEIPLGKMLKHXXXXXXXXXXXXXXXXXPAETKMIENDFDILNMVRQINSDNLGT 713
            +E DGNEIPL KMLK+                 PAETK  ENDFDILNMVR+IN DNL T
Sbjct: 1129 DEKDGNEIPLRKMLKNIKSQGTSGKKVKRNKSVPAETKKAENDFDILNMVREINVDNLET 1188

Query: 714  STNVEPSNGHEHSLSKKTLNDPEHATGQKRKTGETTPVPVPKRRRSSSAYGKLRLSTSTL 893
             TN EPSNGH+HSLSKK L DPE ATG+KRK  ETTP PVPKRRRSSSA+GKLRLSTS  
Sbjct: 1189 PTNFEPSNGHDHSLSKKELKDPESATGKKRKARETTPAPVPKRRRSSSAHGKLRLSTSIS 1248

Query: 894  KASRRVSGENSPGAKSLLDAEINSDTDSKTMERIMA----KDLLVSSLKQKVKGSESFHN 1061
            KASRRVSGE+SP  K LLD E+N D DSKTM+R M     KDL +SSLK+KVKGS+S+HN
Sbjct: 1249 KASRRVSGEDSPQPKLLLDEEVNPDADSKTMQRKMVKGSEKDLSLSSLKRKVKGSDSYHN 1308

Query: 1062 DESNKHDEHDMKSPDDLEQSDKTAYDNSKSSIRSTKKWKRKSIAGLTKCTTKEG 1223
                          DD + SDKT  +N+KSS  S KK KRKSI+GL KC TKEG
Sbjct: 1309 --------------DDTQLSDKTVGNNNKSSTGSAKKGKRKSISGLAKCMTKEG 1348


>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1656

 Score =  441 bits (1133), Expect = e-121
 Identities = 255/415 (61%), Positives = 296/415 (71%), Gaps = 8/415 (1%)
 Frame = +3

Query: 3    DANSLTIYPEYILPYLVHALAHNSCPNVEECKDVGAYDTIYRQLHLILSMLLQRDEGPKS 182
            DANSLT YPEYILPYLVHALA+ SCP ++ECKDVGAY+ IYRQLHLILSML+QRDE  KS
Sbjct: 956  DANSLTTYPEYILPYLVHALANISCPKIDECKDVGAYEKIYRQLHLILSMLMQRDEDDKS 1015

Query: 183  EVTTDKEKEVISTVNSIFRNIKLSEDMVDTSKTQNSHAICDLGLAITKRLVQKDVDLQEL 362
            EV  +KEKE+IST+ SIF +IK S+D+VD SK++NSHAICDLGLAITKRLVQKDVDLQ L
Sbjct: 1016 EVALNKEKEIISTIASIFWSIKQSDDVVDASKSKNSHAICDLGLAITKRLVQKDVDLQGL 1075

Query: 363  SHLVSLPPMLYKASEKKEGDDTMVSDVKSWLADDTTLTHFESLELEV-----VQSQLAE- 524
            S  VSLPPMLYKA EK+   D MVS+VKSWL D++ L HF+SL+ +V     V SQLAE 
Sbjct: 1076 SPSVSLPPMLYKACEKE--IDPMVSEVKSWLVDESVLAHFKSLDDKVSSICQVPSQLAED 1133

Query: 525  -ASKDNE-DGNEIPLGKMLKHXXXXXXXXXXXXXXXXXPAETKMIENDFDILNMVRQINS 698
             A K +E D NE+PLGK++K                  PAETK  END DILNMVR+IN 
Sbjct: 1134 DALKGSERDKNEMPLGKIIKDIKSQGTKGKKVKRKKAVPAETKKAENDIDILNMVREINI 1193

Query: 699  DNLGTSTNVEPSNGHEHSLSKKTLNDPEHATGQKRKTGETTPVPVPKRRRSSSAYGKLRL 878
            DNLG STN E SNGHE+SLSKK  NDPE AT +KRK  E T VPVPKR+RSS A+GK R 
Sbjct: 1194 DNLGLSTNYESSNGHENSLSKKLQNDPECATIKKRK-AEVTLVPVPKRKRSSFAHGKSRS 1252

Query: 879  STSTLKASRRVSGENSPGAKSLLDAEINSDTDSKTMERIMAKDLLVSSLKQKVKGSESFH 1058
            S++  KA  RVSGE+S G K    A+ N DT S  M+R   KD   +S+K KVK S+S H
Sbjct: 1253 SSTPPKAPPRVSGEDSSGVKLPSGAKFNPDTHSSAMQRKKVKD-NEASIKAKVKASKSNH 1311

Query: 1059 NDESNKHDEHDMKSPDDLEQSDKTAYDNSKSSIRSTKKWKRKSIAGLTKCTTKEG 1223
            +D+S+K +EHDM                 K SI STKK KRKSI GL KCTTKEG
Sbjct: 1312 DDDSDKSEEHDM-----------------KPSIGSTKKLKRKSIGGLAKCTTKEG 1349


Top