BLASTX nr result

ID: Glycyrrhiza24_contig00013048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013048
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like ...   208   4e-52
ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein...   182   3e-44
ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein...   179   3e-43
ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...   162   3e-38
ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...   160   8e-38

>ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
            truncatula] gi|124359430|gb|ABN05881.1| HEAT [Medicago
            truncatula] gi|355483356|gb|AES64559.1| Sister chromatid
            cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 1683

 Score =  208 bits (529), Expect = 4e-52
 Identities = 111/167 (66%), Positives = 128/167 (76%), Gaps = 1/167 (0%)
 Frame = -2

Query: 498  GHEHSLSKKVQKDPEFATIKKRKAGEETPVPVPKRRRSSFTNGKLRSGSTSKASQRVSGE 319
            GHE SLSKKVQKDPEF TIKKRK GEET  PVPKR+RS+ T+GK R  S+SKASQR+S E
Sbjct: 1201 GHESSLSKKVQKDPEFGTIKKRKVGEETLAPVPKRKRSAVTHGKSRPSSSSKASQRISEE 1260

Query: 318  DSSGVKLLLDAEINPDTGSKTKQRKMVKGKEPSSEPKVKVSESYHMDESDKSEEHDMKSP 139
              SG KLLL+A ++PDTGSK  QRK+VKGKEPSSE K+K SE++ +DESDKSE+HD+KS 
Sbjct: 1261 VPSGGKLLLNAGVSPDTGSKNMQRKLVKGKEPSSEQKIKASENHRIDESDKSEDHDIKSS 1320

Query: 138  GNL-XXXXXXXXXXXXSVGSTRKLKRKSIGRLAKCTTKEDESDFEDL 1
            G L             S GST++ KRKSIG LAKCTTKE ESD EDL
Sbjct: 1321 GKLKTPNKTKNENFKTSAGSTKRQKRKSIGGLAKCTTKEGESDAEDL 1367


>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1656

 Score =  182 bits (461), Expect = 3e-44
 Identities = 108/167 (64%), Positives = 118/167 (70%), Gaps = 1/167 (0%)
 Frame = -2

Query: 498  GHEHSLSKKVQKDPEFATIKKRKAGEETPVPVPKRRRSSFTNGKLRSGSTS-KASQRVSG 322
            GHE+SLSKK+Q DPE ATIKKRKA E T VPVPKR+RSSF +GK RS ST  KA  RVSG
Sbjct: 1207 GHENSLSKKLQNDPECATIKKRKA-EVTLVPVPKRKRSSFAHGKSRSSSTPPKAPPRVSG 1265

Query: 321  EDSSGVKLLLDAEINPDTGSKTKQRKMVKGKEPSSEPKVKVSESYHMDESDKSEEHDMKS 142
            EDSSGVKL   A+ NPDT S   QRK VK  E S + KVK S+S H D+SDKSEEHDMK 
Sbjct: 1266 EDSSGVKLPSGAKFNPDTHSSAMQRKKVKDNEASIKAKVKASKSNHDDDSDKSEEHDMK- 1324

Query: 141  PGNLXXXXXXXXXXXXSVGSTRKLKRKSIGRLAKCTTKEDESDFEDL 1
                            S+GST+KLKRKSIG LAKCTTKE ESD EDL
Sbjct: 1325 ---------------PSIGSTKKLKRKSIGGLAKCTTKEGESDAEDL 1356


>ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1648

 Score =  179 bits (453), Expect = 3e-43
 Identities = 108/167 (64%), Positives = 119/167 (71%), Gaps = 1/167 (0%)
 Frame = -2

Query: 498  GHEHSLSKKVQKDPEFATIKKRKAGEETPVPVPKRRRSSFTNGKLRSGST-SKASQRVSG 322
            GHE+SLSKK+QKDPE ATIKKRKA E T VPVPKR+RSSF +GK RS ST  K   RVSG
Sbjct: 1202 GHENSLSKKLQKDPECATIKKRKA-EVTLVPVPKRKRSSFAHGKSRSNSTPPKGPPRVSG 1260

Query: 321  EDSSGVKLLLDAEINPDTGSKTKQRKMVKGKEPSSEPKVKVSESYHMDESDKSEEHDMKS 142
            EDSS VK  L A+ NPDT S  KQRK VK  E S E KVK S+SYH ++SDKSEEH MKS
Sbjct: 1261 EDSSEVKFPLGAKFNPDTHS--KQRKKVKDNEASIEAKVKASKSYHDNDSDKSEEHGMKS 1318

Query: 141  PGNLXXXXXXXXXXXXSVGSTRKLKRKSIGRLAKCTTKEDESDFEDL 1
                            S+GS +KLKRKSIG LAKCTTKE+ESD EDL
Sbjct: 1319 ----------------SIGSAKKLKRKSIGGLAKCTTKEEESDAEDL 1349


>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1642

 Score =  162 bits (410), Expect = 3e-38
 Identities = 102/172 (59%), Positives = 113/172 (65%), Gaps = 6/172 (3%)
 Frame = -2

Query: 498  GHEHSLSKKVQKDPEFATIKKRKAGEETPVPVPKRRRSSFTNGKLR-SGSTSKASQRVSG 322
            GH+HSLSKK  KDPE AT KKRKA E TP PVPKRRRSS  +GKLR S S SKAS+RVSG
Sbjct: 1197 GHDHSLSKKELKDPESATGKKRKARETTPAPVPKRRRSSSAHGKLRLSTSISKASRRVSG 1256

Query: 321  EDSSGVKLLLDAEINPDTGSKTKQRKMVKGKE-----PSSEPKVKVSESYHMDESDKSEE 157
            EDS   KLLLD E+NPD  SKT QRKMVKG E      S + KVK S+SYH D++  S+ 
Sbjct: 1257 EDSPQPKLLLDEEVNPDADSKTMQRKMVKGSEKDLSLSSLKRKVKGSDSYHNDDTQLSD- 1315

Query: 156  HDMKSPGNLXXXXXXXXXXXXSVGSTRKLKRKSIGRLAKCTTKEDESDFEDL 1
               K+ GN             S GS +K KRKSI  LAKC TKE E D EDL
Sbjct: 1316 ---KTVGN---------NNKSSTGSAKKGKRKSISGLAKCMTKEGEIDTEDL 1355


>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
            [Glycine max]
          Length = 1641

 Score =  160 bits (406), Expect = 8e-38
 Identities = 99/172 (57%), Positives = 114/172 (66%), Gaps = 6/172 (3%)
 Frame = -2

Query: 498  GHEHSLSKKVQKDPEFATIKKRKAGEETPVPVPKRRRSSFTNGKLR-SGSTSKASQRVSG 322
            GH+HSL KK  KDPE+AT KKRKA + TPVPVPKRRRSS  +GKLR S S SKAS+RVSG
Sbjct: 1197 GHDHSLIKKELKDPEYATGKKRKASKTTPVPVPKRRRSSSAHGKLRLSTSISKASRRVSG 1256

Query: 321  EDSSGVKLLLDAEINPDTGSKTKQRKMVKGKE-----PSSEPKVKVSESYHMDESDKSEE 157
             DS   KL LD E+NPD  SKT QRKMVKG E      S + KVK S+SYH D++ +S++
Sbjct: 1257 VDSPQPKLPLDEEVNPDADSKTMQRKMVKGSEKDLLLSSLKRKVKGSDSYHNDDTQQSDK 1316

Query: 156  HDMKSPGNLXXXXXXXXXXXXSVGSTRKLKRKSIGRLAKCTTKEDESDFEDL 1
               K+                S GST+K KRKSI  LAKCTTKE E D EDL
Sbjct: 1317 TVGKN-------------NKSSTGSTKKGKRKSISGLAKCTTKEGEIDTEDL 1355


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