BLASTX nr result

ID: Glycyrrhiza24_contig00013035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013035
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600727.1| HMG-Y-related protein A [Medicago truncatula...   194   2e-47
ref|XP_003552987.1| PREDICTED: HMG-Y-related protein A-like [Gly...   177   3e-42
ref|XP_003538393.1| PREDICTED: HMG-Y-related protein A-like [Gly...   171   2e-40
ref|XP_002302948.1| high mobility group family [Populus trichoca...   158   2e-36
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   142   1e-31

>ref|XP_003600727.1| HMG-Y-related protein A [Medicago truncatula]
           gi|355489775|gb|AES70978.1| HMG-Y-related protein A
           [Medicago truncatula]
          Length = 184

 Score =  194 bits (494), Expect = 2e-47
 Identities = 109/185 (58%), Positives = 115/185 (62%), Gaps = 3/185 (1%)
 Frame = +1

Query: 136 MAPGEVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLH 315
           MA G VINKPLSIPSY EMILKAIE LNEENGSNKSSISKYI+STYGGLPQGHK LLNLH
Sbjct: 1   MATGVVINKPLSIPSYREMILKAIEGLNEENGSNKSSISKYIESTYGGLPQGHKVLLNLH 60

Query: 316 LAKMRDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 495
           LA+MRD+GELVFWKNNYTK                                         
Sbjct: 61  LARMRDSGELVFWKNNYTKRDPNAPPRRGRGRPPKAKESFSSGAMYSQPKPRGRPPKDPN 120

Query: 496 XXXXXXXVKASTGNGRPRGRPRKMARPTGGFGEAPPSTVGT---GRPRGRPPKMKSPTLM 666
                  +KA  G GRPRGRPRKM+RPTG F    P  +GT   GRPRGRPPKMKS TL 
Sbjct: 121 GPPKSPQMKAPVGTGRPRGRPRKMSRPTGAFDGPLPLALGTGGSGRPRGRPPKMKSTTL- 179

Query: 667 TEITA 681
            EI A
Sbjct: 180 AEINA 184


>ref|XP_003552987.1| PREDICTED: HMG-Y-related protein A-like [Glycine max]
          Length = 182

 Score =  177 bits (449), Expect = 3e-42
 Identities = 101/186 (54%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
 Frame = +1

Query: 136 MAPGEVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLH 315
           MA G  INKP S+P YPEMIL+AIEALNE+NGSNKSSISKYI+STYGGLPQGHK LLN+H
Sbjct: 1   MATGVFINKPPSLPPYPEMILEAIEALNEDNGSNKSSISKYIESTYGGLPQGHKVLLNVH 60

Query: 316 LAKMRDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 495
           LAKMRD+G LVFWKNNYTK                                         
Sbjct: 61  LAKMRDSGVLVFWKNNYTKRDPKAPPRRGRGRPPKPKEPLPPGTVLSPPRPKGRPPKDPN 120

Query: 496 XXXXXXXVKASTGNGRPRGRPRKMARPTGGFGEAPPST----VGTGRPRGRPPKMKSPTL 663
                   KA T +GRPRGRPRKM RPTGG  EA P++      +GRPRGRPPK+K   +
Sbjct: 121 DPGKPP--KALTESGRPRGRPRKMTRPTGGLSEASPASKVKASTSGRPRGRPPKVK--PV 176

Query: 664 MTEITA 681
            TEI+A
Sbjct: 177 FTEISA 182


>ref|XP_003538393.1| PREDICTED: HMG-Y-related protein A-like [Glycine max]
          Length = 184

 Score =  171 bits (434), Expect = 2e-40
 Identities = 99/187 (52%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
 Frame = +1

Query: 136 MAPGEVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLH 315
           MA G+VINKP S+P YPEMI +AIEALNEENGSNKSSISKYI+STYGGLPQ HK LLN+H
Sbjct: 1   MATGQVINKPPSLPPYPEMIREAIEALNEENGSNKSSISKYIESTYGGLPQAHKVLLNVH 60

Query: 316 LAKMRDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 495
           LAKMR++G LVFWKNNYTK                                         
Sbjct: 61  LAKMRESGVLVFWKNNYTK--RDPNAPPRRGRGRPPKPKEPLPPGTVLSPPRPRGRPSKD 118

Query: 496 XXXXXXXVKAS-TGNGRPRGRPRKMARPTGGFGEAPPST-----VGTGRPRGRPPKMKSP 657
                  +KAS  G+GRPRGRPRKMA PTGG GE   ++        GRPRGRPPK+K+ 
Sbjct: 119 PNDLQKPLKASVVGSGRPRGRPRKMAWPTGGLGEVSQASKAKPVTSNGRPRGRPPKVKA- 177

Query: 658 TLMTEIT 678
            + TEI+
Sbjct: 178 -VFTEIS 183


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  158 bits (399), Expect = 2e-36
 Identities = 89/180 (49%), Positives = 102/180 (56%), Gaps = 8/180 (4%)
 Frame = +1

Query: 148 EVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLHLAKM 327
           E INKP S+P YPEMIL AIEALNE NG NK+SISKYI+S YG LP GH ALL+ HL +M
Sbjct: 4   EEINKPPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHLNRM 63

Query: 328 RDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 507
           +D GELVFWKNNY K                                             
Sbjct: 64  KDTGELVFWKNNYMKPDPNAPPRRGRGRPPKPKDPLSPGSDLPPARPRGRPPKDPNAPPK 123

Query: 508 XXXVKASTG-NGRPRGRPRKMARPTGGF-------GEAPPSTVGTGRPRGRPPKMKSPTL 663
               KA+TG +G+PRGRPRKMARPTGG          A P T G+GRPRGRPPK+K+ T+
Sbjct: 124 PVKPKAATGRSGKPRGRPRKMARPTGGITTGTATTTSAVPMTAGSGRPRGRPPKVKAATM 183


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  142 bits (357), Expect = 1e-31
 Identities = 79/177 (44%), Positives = 99/177 (55%)
 Frame = +1

Query: 148 EVINKPLSIPSYPEMILKAIEALNEENGSNKSSISKYIDSTYGGLPQGHKALLNLHLAKM 327
           E +NKP S+P YPEM++KA++ALNE +GSNKS+ISKYI+STYG LP GH  LL  HL KM
Sbjct: 4   EEVNKPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHLNKM 63

Query: 328 RDNGELVFWKNNYTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 507
           +D+GELVF KNNY K                                             
Sbjct: 64  KDSGELVFLKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVLSPPRPRGRPPKDPNAPPK 123

Query: 508 XXXVKASTGNGRPRGRPRKMARPTGGFGEAPPSTVGTGRPRGRPPKMKSPTLMTEIT 678
               K STG+GRPRGRP+K+AR         P+ V +GRPRGRPPK+K    +TE++
Sbjct: 124 SPKTKVSTGSGRPRGRPKKIARSPAA---VAPTPVPSGRPRGRPPKVKPQ--LTEVS 175


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