BLASTX nr result

ID: Glycyrrhiza24_contig00013010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013010
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613215.1| Polygalacturonase [Medicago truncatula] gi|3...   741   0.0  
ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like ...   733   0.0  
ref|XP_003531999.1| PREDICTED: polygalacturonase At1g48100 isofo...   731   0.0  
ref|XP_003532000.1| PREDICTED: polygalacturonase At1g48100 isofo...   706   0.0  
gb|AAK50769.1|AF361321_1 polygalacturonase [Pisum sativum]            678   0.0  

>ref|XP_003613215.1| Polygalacturonase [Medicago truncatula] gi|355514550|gb|AES96173.1|
            Polygalacturonase [Medicago truncatula]
          Length = 543

 Score =  741 bits (1912), Expect = 0.0
 Identities = 349/389 (89%), Positives = 366/389 (94%), Gaps = 9/389 (2%)
 Frame = -3

Query: 1412 MLVPANYAFYVGPISFSGPYCKPNIVFQ---------LDGTIIAPTNPNAWGGGLLQWLE 1260
            M++PANY FYVGPISFSGPYCK NIVFQ         LDGTIIAPTNPNAW G  LQWLE
Sbjct: 155  MVIPANYIFYVGPISFSGPYCKANIVFQANNKVIFCQLDGTIIAPTNPNAWSGVTLQWLE 214

Query: 1259 FSKLVGITIQGNGVIDGRGSVWWQSSPYDNPIDDEEKLIVPLNHTQKPPMPVQSEMGRKM 1080
            F+KL GITIQGNGVIDGRGSVWWQ  PYDNPIDDEEKLIVPLN TQKPPMPVQ+EMGRKM
Sbjct: 215  FTKLEGITIQGNGVIDGRGSVWWQDFPYDNPIDDEEKLIVPLNQTQKPPMPVQNEMGRKM 274

Query: 1079 PSIKPTALRFYGSFSPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGNSPNTDGIHL 900
            PS KPTALRFYGS+ PTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPG+SPNTDGIHL
Sbjct: 275  PSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHL 334

Query: 899  QNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNIT 720
            QNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNIT
Sbjct: 335  QNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNIT 394

Query: 719  VRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKTTCTNHTSA 540
            VRDVN+H++MNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDK  CTNHTSA
Sbjct: 395  VRDVNIHDSMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRVCTNHTSA 454

Query: 539  VALAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPVQEQYHLYDPFCWQTFGE 360
            V+LAGINYERI+GTYTVKPVHFACSDSLPCVDVSLT+VELKP+QE+YHLYDPFCWQTFGE
Sbjct: 455  VSLAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLYDPFCWQTFGE 514

Query: 359  LRTPTVPPIACLQIGKPSSNRVQTDHDMC 273
            LRTPTVPPI CLQIGKPS+NR+QTDHD+C
Sbjct: 515  LRTPTVPPIGCLQIGKPSNNRIQTDHDIC 543


>ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 538

 Score =  733 bits (1892), Expect = 0.0
 Identities = 339/383 (88%), Positives = 368/383 (96%), Gaps = 3/383 (0%)
 Frame = -3

Query: 1412 MLVPANYAFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWGGGLLQWLEFSKLVGITI 1233
            MLVPA+YAF+VGPISFSGPYCKP+IVFQLDGTI+APT+P AWG GLLQWLEFSKLVGITI
Sbjct: 156  MLVPADYAFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPKAWGKGLLQWLEFSKLVGITI 215

Query: 1232 QGNGVIDGRGSVWWQSSPYDNPIDDEEKLIVPLNHT---QKPPMPVQSEMGRKMPSIKPT 1062
            QGNG+IDGRGSVWWQ + YD+PIDDEEKLIVPLNHT     PP+P+QSEMG KMPS+KPT
Sbjct: 216  QGNGIIDGRGSVWWQDNQYDDPIDDEEKLIVPLNHTVGSPSPPLPIQSEMGGKMPSVKPT 275

Query: 1061 ALRFYGSFSPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGNSPNTDGIHLQNSKDV 882
            ALRFYGSF+PTVTGITIQNSPQCHLKFDNCNGV+VHDV+ISSPG+SPNTDGIHLQNSKDV
Sbjct: 276  ALRFYGSFNPTVTGITIQNSPQCHLKFDNCNGVMVHDVTISSPGDSPNTDGIHLQNSKDV 335

Query: 881  LIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNM 702
            LI+SS +ACGDDCISIQTGCSN+YVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNM
Sbjct: 336  LIYSSSMACGDDCISIQTGCSNIYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNM 395

Query: 701  HNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKTTCTNHTSAVALAGI 522
            HNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEV+LPIVIDQFYCDK TC N TSAV+LAGI
Sbjct: 396  HNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGI 455

Query: 521  NYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPVQEQYHLYDPFCWQTFGELRTPTV 342
            NYERIRGTYTVKPVHFACSD+LPCVDVSLTSVELKP+QEQYHLY+PFCWQT+GEL+TPTV
Sbjct: 456  NYERIRGTYTVKPVHFACSDNLPCVDVSLTSVELKPIQEQYHLYNPFCWQTYGELKTPTV 515

Query: 341  PPIACLQIGKPSSNRVQTDHDMC 273
            PPI CLQIGKP++NR+QTDHD+C
Sbjct: 516  PPIDCLQIGKPTNNRIQTDHDLC 538


>ref|XP_003531999.1| PREDICTED: polygalacturonase At1g48100 isoform 1 [Glycine max]
          Length = 538

 Score =  731 bits (1887), Expect = 0.0
 Identities = 338/383 (88%), Positives = 368/383 (96%), Gaps = 3/383 (0%)
 Frame = -3

Query: 1412 MLVPANYAFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWGGGLLQWLEFSKLVGITI 1233
            MLVPA+Y F+VGPISFSGPYCKP+IVFQLDGTI+APT+PNAWG GLLQWLEFSKLVGITI
Sbjct: 156  MLVPADYVFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITI 215

Query: 1232 QGNGVIDGRGSVWWQSSPYDNPIDDEEKLIVPLNHT---QKPPMPVQSEMGRKMPSIKPT 1062
            QGNG+IDGRGSVWWQ +PYD+PIDDEEKLIVPLNHT     PP+P+QSEMG KMPS+KPT
Sbjct: 216  QGNGIIDGRGSVWWQDNPYDDPIDDEEKLIVPLNHTIGSPSPPLPIQSEMGGKMPSVKPT 275

Query: 1061 ALRFYGSFSPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGNSPNTDGIHLQNSKDV 882
            ALRFYGSF+PTVTGITIQNSPQCHLKFD+CNGV+VH+V+ISSPG+SPNTDGIHLQNSKDV
Sbjct: 276  ALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIHLQNSKDV 335

Query: 881  LIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNM 702
            LI+ S +ACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNM
Sbjct: 336  LIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNM 395

Query: 701  HNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKTTCTNHTSAVALAGI 522
            HNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEV+LPIVIDQFYCDK TC N TSAV+LAGI
Sbjct: 396  HNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGI 455

Query: 521  NYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPVQEQYHLYDPFCWQTFGELRTPTV 342
            NYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKP+QE+YHLY+PFCWQT+GEL+TPTV
Sbjct: 456  NYERIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPIQEKYHLYNPFCWQTYGELKTPTV 515

Query: 341  PPIACLQIGKPSSNRVQTDHDMC 273
            PPI CLQIGKP++NR+QTDHD+C
Sbjct: 516  PPIDCLQIGKPTNNRIQTDHDLC 538


>ref|XP_003532000.1| PREDICTED: polygalacturonase At1g48100 isoform 2 [Glycine max]
          Length = 523

 Score =  706 bits (1822), Expect = 0.0
 Identities = 329/380 (86%), Positives = 358/380 (94%)
 Frame = -3

Query: 1412 MLVPANYAFYVGPISFSGPYCKPNIVFQLDGTIIAPTNPNAWGGGLLQWLEFSKLVGITI 1233
            MLVPA+Y F+VGPISFSGPYCKP+IVFQLDGTI+APT+PNAWG GLLQWLEFSKLVGITI
Sbjct: 156  MLVPADYVFFVGPISFSGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITI 215

Query: 1232 QGNGVIDGRGSVWWQSSPYDNPIDDEEKLIVPLNHTQKPPMPVQSEMGRKMPSIKPTALR 1053
            QGNG+IDGRGSVWWQ +PYD+PIDDEEKLI+            QSEMG KMPS+KPTALR
Sbjct: 216  QGNGIIDGRGSVWWQDNPYDDPIDDEEKLII------------QSEMGGKMPSVKPTALR 263

Query: 1052 FYGSFSPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGNSPNTDGIHLQNSKDVLIH 873
            FYGSF+PTVTGITIQNSPQCHLKFD+CNGV+VH+V+ISSPG+SPNTDGIHLQNSKDVLI+
Sbjct: 264  FYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIHLQNSKDVLIY 323

Query: 872  SSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNT 693
             S +ACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNT
Sbjct: 324  GSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNT 383

Query: 692  MNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKTTCTNHTSAVALAGINYE 513
            MNGVRIKTWQGGSGSVQGVLFSNIQVSEV+LPIVIDQFYCDK TC N TSAV+LAGINYE
Sbjct: 384  MNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQTSAVSLAGINYE 443

Query: 512  RIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPVQEQYHLYDPFCWQTFGELRTPTVPPI 333
            RIRGTYTVKPVHFACSDSLPCVDVSLTSVELKP+QE+YHLY+PFCWQT+GEL+TPTVPPI
Sbjct: 444  RIRGTYTVKPVHFACSDSLPCVDVSLTSVELKPIQEKYHLYNPFCWQTYGELKTPTVPPI 503

Query: 332  ACLQIGKPSSNRVQTDHDMC 273
             CLQIGKP++NR+QTDHD+C
Sbjct: 504  DCLQIGKPTNNRIQTDHDLC 523


>gb|AAK50769.1|AF361321_1 polygalacturonase [Pisum sativum]
          Length = 355

 Score =  678 bits (1749), Expect = 0.0
 Identities = 314/353 (88%), Positives = 336/353 (95%)
 Frame = -3

Query: 1331 QLDGTIIAPTNPNAWGGGLLQWLEFSKLVGITIQGNGVIDGRGSVWWQSSPYDNPIDDEE 1152
            +LDGTIIAPTNP+AW G  LQWLEF+KL GI IQGNGVIDGRGSVWWQ  PYDNPIDDEE
Sbjct: 3    ELDGTIIAPTNPSAWSGVTLQWLEFTKLEGIVIQGNGVIDGRGSVWWQDFPYDNPIDDEE 62

Query: 1151 KLIVPLNHTQKPPMPVQSEMGRKMPSIKPTALRFYGSFSPTVTGITIQNSPQCHLKFDNC 972
            KLI+PLNHTQ PPMPVQ+EMGR MPS KPTALRFYGS+ PTVTGITIQNSPQCHLKFD+C
Sbjct: 63   KLIIPLNHTQNPPMPVQNEMGRTMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDSC 122

Query: 971  NGVLVHDVSISSPGNSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNC 792
            N VLVHDVSISSPG+SPNTDGIHLQNSKDVLI+SSKLACGDDCISIQTGCSNVYVHNV+C
Sbjct: 123  NRVLVHDVSISSPGDSPNTDGIHLQNSKDVLIYSSKLACGDDCISIQTGCSNVYVHNVDC 182

Query: 791  GPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVS 612
            GPGHGISIGSLGKDNTRACVSNITVRDVN+HN+MNGVRIKTWQGGSGSVQGVLFSNIQV+
Sbjct: 183  GPGHGISIGSLGKDNTRACVSNITVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNIQVT 242

Query: 611  EVQLPIVIDQFYCDKTTCTNHTSAVALAGINYERIRGTYTVKPVHFACSDSLPCVDVSLT 432
            EVQLPIVIDQFYCDK TCTNHTSAV+L GINYERI+GTYTVKPVHFACSDS PCVDVSL 
Sbjct: 243  EVQLPIVIDQFYCDKRTCTNHTSAVSLEGINYERIKGTYTVKPVHFACSDSFPCVDVSLA 302

Query: 431  SVELKPVQEQYHLYDPFCWQTFGELRTPTVPPIACLQIGKPSSNRVQTDHDMC 273
            +VELKP+QEQYHLYDPFCWQTFGEL+TPTVPPI CLQIGKP++NR+QTDHD+C
Sbjct: 303  TVELKPIQEQYHLYDPFCWQTFGELKTPTVPPIGCLQIGKPTNNRIQTDHDIC 355


Top