BLASTX nr result

ID: Glycyrrhiza24_contig00012960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012960
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   138   4e-31
ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   133   2e-29
ref|XP_003616131.1| Regulator of nonsense transcripts-like prote...   119   3e-25
ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806...   113   1e-23
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   112   2e-23

>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 978

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/96 (71%), Positives = 77/96 (80%)
 Frame = -2

Query: 289 LKLRIRTLTCAPXXXXXXXXXARLHSIAKDSLEHDTYGLGDIVLLGNSKRMKIDCHKGLG 110
           LKLRIRTLTCAP         +RLHSIAKDSLEH +YGLGDI+L GNSKRMKI+ +KGLG
Sbjct: 287 LKLRIRTLTCAPTNTAVLAVVSRLHSIAKDSLEHGSYGLGDILLFGNSKRMKIESYKGLG 346

Query: 109 EVFLDHRVDDLYRCLVPMSRWKHYLESMIKLLKDPE 2
           EVFLD+RVDDL  C  PM+ WK+ LESMI LLKDPE
Sbjct: 347 EVFLDNRVDDLLYCFSPMTGWKNCLESMISLLKDPE 382


>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 950

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/96 (70%), Positives = 75/96 (78%)
 Frame = -2

Query: 289 LKLRIRTLTCAPXXXXXXXXXARLHSIAKDSLEHDTYGLGDIVLLGNSKRMKIDCHKGLG 110
           LKLRIRTLTCAP         +RLHSIAKDSLEH +YGLGDIVL GNSKRMKID +K LG
Sbjct: 350 LKLRIRTLTCAPTNTAVLAVVSRLHSIAKDSLEHGSYGLGDIVLFGNSKRMKIDSYKDLG 409

Query: 109 EVFLDHRVDDLYRCLVPMSRWKHYLESMIKLLKDPE 2
           EVFL++RVDDL     PM+ W + LESMIKLLKDPE
Sbjct: 410 EVFLENRVDDLLHAFSPMTGWINSLESMIKLLKDPE 445


>ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355517466|gb|AES99089.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 950

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/95 (56%), Positives = 70/95 (73%)
 Frame = -2

Query: 286 KLRIRTLTCAPXXXXXXXXXARLHSIAKDSLEHDTYGLGDIVLLGNSKRMKIDCHKGLGE 107
           KL+ RTLTCAP          R+HS+  DS+EHDTYGLGDIVL GN+KRMK+D + GLG+
Sbjct: 303 KLKTRTLTCAPTNTAILQVATRIHSLVMDSVEHDTYGLGDIVLFGNNKRMKLDSYPGLGD 362

Query: 106 VFLDHRVDDLYRCLVPMSRWKHYLESMIKLLKDPE 2
           +FLD+RV +L +C  P++ WK  LESM + LKDP+
Sbjct: 363 IFLDYRVRNLMQCFSPLTGWKQTLESMTQFLKDPK 397


>ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806346 [Glycine max]
          Length = 975

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/96 (57%), Positives = 68/96 (70%)
 Frame = -2

Query: 289 LKLRIRTLTCAPXXXXXXXXXARLHSIAKDSLEHDTYGLGDIVLLGNSKRMKIDCHKGLG 110
           L++R RTL CAP         ARL ++   SL  DTYGLGDIVL GN  RMK+D + GL 
Sbjct: 355 LRVRHRTLACAPTNTAVLEVAARLRNLVNGSLGFDTYGLGDIVLFGNKSRMKVDSYTGLR 414

Query: 109 EVFLDHRVDDLYRCLVPMSRWKHYLESMIKLLKDPE 2
           +VFLDHRV +L +C  P+S WKHYLESMI+LL+DP+
Sbjct: 415 DVFLDHRVQNLSKCFDPLSGWKHYLESMIQLLEDPK 450


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
 Frame = -2

Query: 289 LKLRIRTLTCAPXXXXXXXXXARLHSIAKDSLEHD--TYGLGDIVLLGNSKRMKIDCHKG 116
           LK + RTLTCAP         ARL ++ + SLEHD  TYGLGDIV+ GN  RMK+DC++ 
Sbjct: 302 LKFKARTLTCAPTNTAVLEVAARLQNLVEKSLEHDVDTYGLGDIVIFGNRSRMKVDCYRC 361

Query: 115 LGEVFLDHRVDDLYRCLVPMSRWKHYLESMIKLLKDP 5
           L ++FLD+RV +L RC  P + WKHYLESMI LL++P
Sbjct: 362 LQDIFLDYRVSNLLRCFAPFTGWKHYLESMIALLENP 398


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