BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012913
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containi...   500   e-139
ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...   471   e-130
ref|XP_002325369.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...   459   e-127
ref|NP_197340.1| pentatricopeptide repeat-containing protein [Ar...   448   e-123

>ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial-like [Glycine max]
          Length = 450

 Score =  500 bits (1288), Expect = e-139
 Identities = 233/303 (76%), Positives = 274/303 (90%)
 Frame = -3

Query: 1249 HRHVDQAVHLFNRANKVFNCPQAVHLYNSLLFALCESRLFHAAYSLIRRMLRKGISPDKR 1070
            +RHVDQ+V +FN++  + NCPQ + LYN+LL +LC ++LFH AY+L+RRMLRKG+ PDK 
Sbjct: 151  NRHVDQSVQVFNKSPLLLNCPQTLPLYNALLRSLCHNKLFHGAYALVRRMLRKGLRPDKT 210

Query: 1069 TYALLVNAWCSAGKLREARQFLQEISDKGFTPPLRGRDLLIEGLLNAGYIESAKGMVRKM 890
            TYA+LVNAWCS GKLREA+ FL+E+S+KGF PP+RGRDLL+EGLLNAGY+ESAKGMVR M
Sbjct: 211  TYAVLVNAWCSNGKLREAKLFLEEMSEKGFNPPVRGRDLLVEGLLNAGYVESAKGMVRNM 270

Query: 889  VKEGSVPDVGTFNALVEAVCRCGEEEVGFCVGLYHELCQLGLVPDVNTYKILVPAVSKVG 710
            +K+GSVPDVGTFNA+VE V +   E+V FCVGLYHE+C LG+ PDVNTYKILVPAVSK G
Sbjct: 271  IKQGSVPDVGTFNAVVETVSK---EDVQFCVGLYHEVCALGMAPDVNTYKILVPAVSKSG 327

Query: 709  LMDEAFRLLSNFTEEGHRPFPSLYAPVIKALCRRGQFDDAFCFFGDMKAKGHPPNRPLYT 530
            ++DEAFRLL+NF E+GH+PFPSLYAPVIKALCRRGQFDDAFCFFGDMKAK HPPNRPLYT
Sbjct: 328  MVDEAFRLLNNFIEDGHKPFPSLYAPVIKALCRRGQFDDAFCFFGDMKAKAHPPNRPLYT 387

Query: 529  MLITMCGRAGRFVDAANYLFEMTEIGFVPISRCFDMVTDGLKNSGKHDLVKRVQQLEVSL 350
            MLITMCGRAG+FV+AANY+FEMTE+G VPISRCFDMVTDGLKN GKHDL +RVQ+LEVS+
Sbjct: 388  MLITMCGRAGKFVEAANYIFEMTEMGLVPISRCFDMVTDGLKNCGKHDLARRVQELEVSI 447

Query: 349  RGV 341
            RGV
Sbjct: 448  RGV 450


>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial-like [Cucumis sativus]
            gi|449518358|ref|XP_004166209.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  471 bits (1213), Expect = e-130
 Identities = 212/300 (70%), Positives = 258/300 (86%)
 Frame = -3

Query: 1240 VDQAVHLFNRANKVFNCPQAVHLYNSLLFALCESRLFHAAYSLIRRMLRKGISPDKRTYA 1061
            VD AV +FN+ +K  +CPQ V +YN+LLFALCE ++FH AY+LIRRM+RKG++PDK+TY 
Sbjct: 158  VDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYG 217

Query: 1060 LLVNAWCSAGKLREARQFLQEISDKGFTPPLRGRDLLIEGLLNAGYIESAKGMVRKMVKE 881
             LV  WCSAGK++EA++FL+E+S KGF PPLRGRDLL+EGLLNAGY+ESAK MVRKM KE
Sbjct: 218  TLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKE 277

Query: 880  GSVPDVGTFNALVEAVCRCGEEEVGFCVGLYHELCQLGLVPDVNTYKILVPAVSKVGLMD 701
            GSVPD+GTFN+L++ +C  GE  V FC+ ++HE+C+LGL PD+NTYKIL+PA SKVG +D
Sbjct: 278  GSVPDIGTFNSLIDVICNSGE--VDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRID 335

Query: 700  EAFRLLSNFTEEGHRPFPSLYAPVIKALCRRGQFDDAFCFFGDMKAKGHPPNRPLYTMLI 521
            EAFRLL    E+GH PFPSLY P++K +C+RGQFDDAFCFFGDMK KGHPPNRP+YTMLI
Sbjct: 336  EAFRLLHCCIEDGHVPFPSLYGPILKGMCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLI 395

Query: 520  TMCGRAGRFVDAANYLFEMTEIGFVPISRCFDMVTDGLKNSGKHDLVKRVQQLEVSLRGV 341
            TMCGR GRFVDAANYL EM E+G  PISRCFDMVTDGLKN GKHDL K+++QLEVS+RG+
Sbjct: 396  TMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 455


>ref|XP_002325369.1| predicted protein [Populus trichocarpa] gi|222862244|gb|EEE99750.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  469 bits (1208), Expect = e-130
 Identities = 217/303 (71%), Positives = 259/303 (85%)
 Frame = -3

Query: 1252 RHRHVDQAVHLFNRANKVFNCPQAVHLYNSLLFALCESRLFHAAYSLIRRMLRKGISPDK 1073
            +H  +DQAV +FN+ ++  NC   V +YNSLLFALCE ++FH AY+L+RRM+RKGI PDK
Sbjct: 122  KHGLIDQAVEVFNKCSRSLNCQHNVCVYNSLLFALCEVKMFHGAYALVRRMIRKGIVPDK 181

Query: 1072 RTYALLVNAWCSAGKLREARQFLQEISDKGFTPPLRGRDLLIEGLLNAGYIESAKGMVRK 893
            RTY +LVN WCS+GKLREA+ FL+E+S KGF PP+RGRDLLIEGLLNAGY+ESAK MVR+
Sbjct: 182  RTYGVLVNGWCSSGKLREAKGFLEEMSKKGFNPPVRGRDLLIEGLLNAGYLESAKDMVRR 241

Query: 892  MVKEGSVPDVGTFNALVEAVCRCGEEEVGFCVGLYHELCQLGLVPDVNTYKILVPAVSKV 713
            M+KEG VPDV TFN++VEA+C  GE  V FCV +YH +C+LG  PD+N+YKIL+PAVSKV
Sbjct: 242  MMKEGLVPDVNTFNSMVEAICNAGE--VDFCVDMYHSVCKLGFCPDINSYKILIPAVSKV 299

Query: 712  GLMDEAFRLLSNFTEEGHRPFPSLYAPVIKALCRRGQFDDAFCFFGDMKAKGHPPNRPLY 533
            G +DEAFRLL N  E+GH+PFPSLYAP+IK + RRGQFDDAFCFF +MK KGHPPNRP+Y
Sbjct: 300  GRIDEAFRLLHNLIEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKVKGHPPNRPVY 359

Query: 532  TMLITMCGRAGRFVDAANYLFEMTEIGFVPISRCFDMVTDGLKNSGKHDLVKRVQQLEVS 353
            TM+ITMCGR G+ V+AANYL EMTEIG VPISRCFDMVTDGLKN GKHDL KR++QLEVS
Sbjct: 360  TMMITMCGRGGKHVEAANYLVEMTEIGLVPISRCFDMVTDGLKNCGKHDLAKRIEQLEVS 419

Query: 352  LRG 344
            LRG
Sbjct: 420  LRG 422


>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial [Vitis vinifera]
            gi|296085168|emb|CBI28663.3| unnamed protein product
            [Vitis vinifera]
          Length = 454

 Score =  459 bits (1181), Expect = e-127
 Identities = 207/304 (68%), Positives = 257/304 (84%)
 Frame = -3

Query: 1252 RHRHVDQAVHLFNRANKVFNCPQAVHLYNSLLFALCESRLFHAAYSLIRRMLRKGISPDK 1073
            +H  VDQAV +FN+A    NCPQ + +YNSLLFALCE + FH AY+LIRRM+RKG++P+K
Sbjct: 153  KHGLVDQAVEVFNKAKSALNCPQTIEVYNSLLFALCEVKYFHGAYALIRRMIRKGVTPNK 212

Query: 1072 RTYALLVNAWCSAGKLREARQFLQEISDKGFTPPLRGRDLLIEGLLNAGYIESAKGMVRK 893
            +TY++LVN WC+AGK++EA+ FL+E+S KGF PP+RGRDLL++GLLNAGY+E+AK MVRK
Sbjct: 213  QTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEMVRK 272

Query: 892  MVKEGSVPDVGTFNALVEAVCRCGEEEVGFCVGLYHELCQLGLVPDVNTYKILVPAVSKV 713
            M KEG  PDV T N+++EA+C+ GE E  FC+ +Y+++C+LG+ P+V TYKI++PA  K 
Sbjct: 273  MTKEGCAPDVETLNSMLEAICKAGEAE--FCIDIYNDVCRLGVSPNVGTYKIMIPAACKE 330

Query: 712  GLMDEAFRLLSNFTEEGHRPFPSLYAPVIKALCRRGQFDDAFCFFGDMKAKGHPPNRPLY 533
            G +DEAFR+L    E+GHRPFPSLYAP+IKALCR GQFDDAFCFF DMK KGHPPNRP+Y
Sbjct: 331  GRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAFCFFSDMKVKGHPPNRPVY 390

Query: 532  TMLITMCGRAGRFVDAANYLFEMTEIGFVPISRCFDMVTDGLKNSGKHDLVKRVQQLEVS 353
            TMLITMCGR GRFVDAANYL EMTE+   PISRCFDMVTDGLKN GKHDL ++++QLEVS
Sbjct: 391  TMLITMCGRGGRFVDAANYLVEMTELNLTPISRCFDMVTDGLKNCGKHDLARKIEQLEVS 450

Query: 352  LRGV 341
            LRGV
Sbjct: 451  LRGV 454


>ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g18390, mitochondrial; Flags: Precursor
            gi|332005166|gb|AED92549.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score =  448 bits (1153), Expect = e-123
 Identities = 209/304 (68%), Positives = 249/304 (81%)
 Frame = -3

Query: 1252 RHRHVDQAVHLFNRANKVFNCPQAVHLYNSLLFALCESRLFHAAYSLIRRMLRKGISPDK 1073
            ++ HVDQAV LFN   K   C Q V +YNSLL ALC+ ++FH AY+LIRRM+RKG+ PDK
Sbjct: 158  KNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDK 217

Query: 1072 RTYALLVNAWCSAGKLREARQFLQEISDKGFTPPLRGRDLLIEGLLNAGYIESAKGMVRK 893
            RTYA+LVN WCSAGK++EA++FL E+S +GF PP RGRDLLIEGLLNAGY+ESAK MV K
Sbjct: 218  RTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSK 277

Query: 892  MVKEGSVPDVGTFNALVEAVCRCGEEEVGFCVGLYHELCQLGLVPDVNTYKILVPAVSKV 713
            M K G VPD+ TFN L+EA+ + GE E  FC+ +Y+  C+LGL  D++TYK L+PAVSK+
Sbjct: 278  MTKGGFVPDIQTFNILIEAISKSGEVE--FCIEMYYTACKLGLCVDIDTYKTLIPAVSKI 335

Query: 712  GLMDEAFRLLSNFTEEGHRPFPSLYAPVIKALCRRGQFDDAFCFFGDMKAKGHPPNRPLY 533
            G +DEAFRLL+N  E+GH+PFPSLYAP+IK +CR G FDDAF FF DMK K HPPNRP+Y
Sbjct: 336  GKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVY 395

Query: 532  TMLITMCGRAGRFVDAANYLFEMTEIGFVPISRCFDMVTDGLKNSGKHDLVKRVQQLEVS 353
            TMLITMCGR G+FVDAANYL EMTE+G VPISRCFDMVTDGLKN GKHDL  R++QLEV 
Sbjct: 396  TMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQ 455

Query: 352  LRGV 341
            LRGV
Sbjct: 456  LRGV 459